RNA–Protein interactions for RNA: ENST00000588278.1

TPGS1-202, Transcript of tubulin polyglutamylase complex subunit 1, humanhuman

Gene TPGS1, Length 2,873 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS1-202ENST00000588278 MBD4O95243 580 aa17.72■□□□□ 0.43
TPGS1-202ENST00000588278 CYP19A1P11511 503 aaPredicted RBP17.72■□□□□ 0.43
TPGS1-202ENST00000588278 CASP8Q14790 479 aa17.72■□□□□ 0.43
TPGS1-202ENST00000588278 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.72■□□□□ 0.43
TPGS1-202ENST00000588278 NBPF3Q9H094 633 aa17.72■□□□□ 0.43
TPGS1-202ENST00000588278 SAMSN1Q9NSI8 373 aaKnown RBP17.72■□□□□ 0.43
TPGS1-202ENST00000588278 EXOC5O00471 708 aa17.72■□□□□ 0.43
TPGS1-202ENST00000588278 COBLO75128 1261 aa17.72■□□□□ 0.43
TPGS1-202ENST00000588278 IVLP07476 585 aa17.72■□□□□ 0.43
TPGS1-202ENST00000588278 KIF4BQ2VIQ3 1234 aa17.72■□□□□ 0.43
TPGS1-202ENST00000588278 NOM1Q5C9Z4 860 aaKnown RBP17.72■□□□□ 0.43
TPGS1-202ENST00000588278 TMEM67Q5HYA8 995 aa17.72■□□□□ 0.43
TPGS1-202ENST00000588278 RAD9BQ6WBX8 426 aa17.72■□□□□ 0.43
TPGS1-202ENST00000588278 NOA1Q8NC60 698 aaKnown RBP17.72■□□□□ 0.43
TPGS1-202ENST00000588278 NAPBQ9H115 298 aa17.72■□□□□ 0.43
TPGS1-202ENST00000588278 POLR3EQ9NVU0 708 aa17.72■□□□□ 0.43
TPGS1-202ENST00000588278 L1RE1Q9UN81 338 aa17.72■□□□□ 0.43
TPGS1-202ENST00000588278 ANGEL1Q9UNK9 670 aaKnown RBP17.72■□□□□ 0.43
TPGS1-202ENST00000588278 NFE2L3Q9Y4A8 694 aa17.72■□□□□ 0.43
TPGS1-202ENST00000588278 ABCC6O95255 1503 aa17.72■□□□□ 0.43
TPGS1-202ENST00000588278 BRD3Q15059 726 aa17.71■□□□□ 0.43
TPGS1-202ENST00000588278 OLFM4Q6UX06 510 aa17.71■□□□□ 0.43
TPGS1-202ENST00000588278 IQUBQ8NA54 791 aa17.71■□□□□ 0.43
TPGS1-202ENST00000588278 ABCF2Q9UG63 623 aa17.71■□□□□ 0.43
TPGS1-202ENST00000588278 CMA1P23946 247 aa17.71■□□□□ 0.43
TPGS1-202ENST00000588278 GUCY2CP25092 1073 aa17.71■□□□□ 0.43
TPGS1-202ENST00000588278 ATL3Q6DD88 541 aa17.71■□□□□ 0.43
TPGS1-202ENST00000588278 SLC26A6Q9BXS9 759 aa17.71■□□□□ 0.43
TPGS1-202ENST00000588278 UBN2Q6ZU65 1347 aa17.71■□□□□ 0.42
TPGS1-202ENST00000588278 IFIT3O14879 490 aaKnown RBP17.7■□□□□ 0.42
TPGS1-202ENST00000588278 TEX33O43247 280 aa17.7■□□□□ 0.42
TPGS1-202ENST00000588278 ZMYND10O75800 440 aa17.7■□□□□ 0.42
TPGS1-202ENST00000588278 YEATS4O95619 227 aa17.7■□□□□ 0.42
TPGS1-202ENST00000588278 BCAMP50895 628 aa17.7■□□□□ 0.42
TPGS1-202ENST00000588278 TRIM28Q13263 835 aaKnown RBP17.7■□□□□ 0.42
TPGS1-202ENST00000588278 MICALL1Q8N3F8 863 aa17.7■□□□□ 0.42
TPGS1-202ENST00000588278 PDE8AO60658 829 aa17.7■□□□□ 0.42
TPGS1-202ENST00000588278 KCNQ4P56696 695 aa17.7■□□□□ 0.42
TPGS1-202ENST00000588278 HSP90B2PQ58FF3 399 aa17.7■□□□□ 0.42
TPGS1-202ENST00000588278 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.7■□□□□ 0.42
TPGS1-202ENST00000588278 NUP133Q8WUM0 1156 aa17.7■□□□□ 0.42
TPGS1-202ENST00000588278 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.7■□□□□ 0.42
TPGS1-202ENST00000588278 GOLGA8AA7E2F4 631 aa17.69■□□□□ 0.42
TPGS1-202ENST00000588278 TDO2P48775 406 aa17.69■□□□□ 0.42
TPGS1-202ENST00000588278 SPECC1LQ69YQ0 1117 aa17.69■□□□□ 0.42
TPGS1-202ENST00000588278 NCAPH2Q6IBW4 605 aa17.69■□□□□ 0.42
TPGS1-202ENST00000588278 EP400NLQ6ZTU2 488 aa17.69■□□□□ 0.42
TPGS1-202ENST00000588278 SMIM5Q71RC9 77 aa17.69■□□□□ 0.42
TPGS1-202ENST00000588278 VPS37DQ86XT2 251 aa17.69■□□□□ 0.42
TPGS1-202ENST00000588278 TUBE1Q9UJT0 475 aa17.69■□□□□ 0.42
TPGS1-202ENST00000588278 LMTK3Q96Q04 1460 aa17.69■□□□□ 0.42
TPGS1-202ENST00000588278 ZBTB43O43298 467 aa17.69■□□□□ 0.42
TPGS1-202ENST00000588278 STX10O60499 249 aa17.69■□□□□ 0.42
TPGS1-202ENST00000588278 KIF23Q02241 960 aaPredicted RBP17.69■□□□□ 0.42
TPGS1-202ENST00000588278 ACRBPQ8NEB7 543 aa17.69■□□□□ 0.42
TPGS1-202ENST00000588278 WTIPA6NIX2 430 aaPredicted RBP17.69■□□□□ 0.42
TPGS1-202ENST00000588278 TBX2Q13207 712 aaPredicted RBP17.69■□□□□ 0.42
TPGS1-202ENST00000588278 RASGRF1Q13972 1273 aa17.69■□□□□ 0.42
TPGS1-202ENST00000588278 KRT40Q6A162 431 aa17.69■□□□□ 0.42
TPGS1-202ENST00000588278 APOA5Q6Q788 366 aa17.69■□□□□ 0.42
TPGS1-202ENST00000588278 SLC35F6Q8N357 371 aa17.69■□□□□ 0.42
TPGS1-202ENST00000588278 EHD4Q9H223 541 aa17.69■□□□□ 0.42
TPGS1-202ENST00000588278 MINDY4BA8MYZ0 360 aa17.68■□□□□ 0.42
TPGS1-202ENST00000588278 IARSP41252 1262 aaKnown RBP17.68■□□□□ 0.42
TPGS1-202ENST00000588278 LIG3P49916 1009 aa17.68■□□□□ 0.42
TPGS1-202ENST00000588278 GRIN1Q05586 938 aa17.68■□□□□ 0.42
TPGS1-202ENST00000588278 TRIM29Q14134 588 aa17.68■□□□□ 0.42
TPGS1-202ENST00000588278 SUSD4Q5VX71 490 aa17.68■□□□□ 0.42
TPGS1-202ENST00000588278 CPLX2Q6PUV4 134 aaKnown RBP17.68■□□□□ 0.42
TPGS1-202ENST00000588278 BICDL1Q6ZP65 573 aa17.68■□□□□ 0.42
TPGS1-202ENST00000588278 FCHSD1Q86WN1 690 aa17.68■□□□□ 0.42
TPGS1-202ENST00000588278 GSPT2Q8IYD1 628 aaKnown RBP17.68■□□□□ 0.42
TPGS1-202ENST00000588278 SPATA5Q8NB90 893 aa17.68■□□□□ 0.42
TPGS1-202ENST00000588278 GEMIN8Q9NWZ8 242 aaKnown RBP17.68■□□□□ 0.42
TPGS1-202ENST00000588278 LRP2BPQ9P2M1 347 aa17.68■□□□□ 0.42
TPGS1-202ENST00000588278 UTRNP46939 3433 aa17.68■□□□□ 0.42
TPGS1-202ENST00000588278 GLI3P10071 1580 aa17.68■□□□□ 0.42
TPGS1-202ENST00000588278 RIC1Q4ADV7 1423 aa17.68■□□□□ 0.42
TPGS1-202ENST00000588278 CCDC175P0C221 793 aa17.68■□□□□ 0.42
TPGS1-202ENST00000588278 STX17P56962 302 aa17.68■□□□□ 0.42
TPGS1-202ENST00000588278 CORO7P57737 925 aa17.68■□□□□ 0.42
TPGS1-202ENST00000588278 TTF1Q15361 905 aaPredicted RBP17.68■□□□□ 0.42
TPGS1-202ENST00000588278 KLHL10Q6JEL2 608 aa17.68■□□□□ 0.42
TPGS1-202ENST00000588278 ZSWIM5Q9P217 1185 aa17.68■□□□□ 0.42
TPGS1-202ENST00000588278 XIRP1Q702N8 1843 aaKnown RBP17.68■□□□□ 0.42
TPGS1-202ENST00000588278 RNF40O75150 1001 aa17.67■□□□□ 0.42
TPGS1-202ENST00000588278 EIF3JO75822 258 aaKnown RBP17.67■□□□□ 0.42
TPGS1-202ENST00000588278 ATP6V1AP38606 617 aa17.67■□□□□ 0.42
TPGS1-202ENST00000588278 AKAP17AQ02040 695 aaKnown RBP17.67■□□□□ 0.42
TPGS1-202ENST00000588278 MED15Q96RN5 788 aa17.67■□□□□ 0.42
TPGS1-202ENST00000588278 CDC23Q9UJX2 597 aa17.67■□□□□ 0.42
TPGS1-202ENST00000588278 KCNJ14Q9UNX9 436 aa17.67■□□□□ 0.42
TPGS1-202ENST00000588278 SLC12A7Q9Y666 1083 aa17.67■□□□□ 0.42
TPGS1-202ENST00000588278 PKD1L3Q7Z443 1732 aa17.67■□□□□ 0.42
TPGS1-202ENST00000588278 MYH15Q9Y2K3 1946 aa17.67■□□□□ 0.42
TPGS1-202ENST00000588278 hCG_1642624A0A1W2PR95 340 aa17.67■□□□□ 0.42
TPGS1-202ENST00000588278 SMIM22K7EJ46 135 aa17.67■□□□□ 0.42
TPGS1-202ENST00000588278 PUM3Q15397 648 aaKnown RBP17.67■□□□□ 0.42
TPGS1-202ENST00000588278 CTR9Q6PD62 1173 aa17.67■□□□□ 0.42
TPGS1-202ENST00000588278 LAMA4Q16363 1823 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms