RNA–Protein interactions for RNA: ENST00000588275.2

LINC01842-201, Transcript of long intergenic non-protein coding RNA 1842, humanhuman

TSL 1 (best) BASIC

Gene LINC01842, Length 768 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01842-201ENST00000588275 JAG1P78504 1218 aa20.54■□□□□ 0.88
LINC01842-201ENST00000588275 MIGA1Q8NAN2 632 aa20.54■□□□□ 0.88
LINC01842-201ENST00000588275 WDR18Q9BV38 432 aa20.54■□□□□ 0.88
LINC01842-201ENST00000588275 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.54■□□□□ 0.88
LINC01842-201ENST00000588275 PAK6Q9NQU5 681 aaPredicted RBP20.54■□□□□ 0.88
LINC01842-201ENST00000588275 EVI5O60447 810 aa20.53■□□□□ 0.88
LINC01842-201ENST00000588275 PEX10O60683 326 aa20.53■□□□□ 0.88
LINC01842-201ENST00000588275 HMGCRP04035 888 aa20.53■□□□□ 0.88
LINC01842-201ENST00000588275 FOXP4Q8IVH2 680 aaPredicted RBP20.53■□□□□ 0.88
LINC01842-201ENST00000588275 ZNF512BQ96KM6 892 aaPredicted RBP20.53■□□□□ 0.88
LINC01842-201ENST00000588275 ZBTB21Q9ULJ3 1066 aa20.53■□□□□ 0.88
LINC01842-201ENST00000588275 NDUFB9Q9Y6M9 179 aa20.53■□□□□ 0.88
LINC01842-201ENST00000588275 MYH1P12882 1939 aa20.53■□□□□ 0.88
LINC01842-201ENST00000588275 USP17L10C9JJH3 530 aa20.52■□□□□ 0.88
LINC01842-201ENST00000588275 RLBP1P12271 317 aa20.52■□□□□ 0.88
LINC01842-201ENST00000588275 USP5P45974 858 aa20.52■□□□□ 0.88
LINC01842-201ENST00000588275 EAF2Q96CJ1 260 aaPredicted RBP20.52■□□□□ 0.88
LINC01842-201ENST00000588275 PAWRQ96IZ0 340 aaKnown RBP20.52■□□□□ 0.88
LINC01842-201ENST00000588275 P2RX7Q99572 595 aaKnown RBP20.52■□□□□ 0.88
LINC01842-201ENST00000588275 ZBTB7BO15156 539 aaPredicted RBP20.51■□□□□ 0.87
LINC01842-201ENST00000588275 CYP2B6P20813 491 aa20.51■□□□□ 0.87
LINC01842-201ENST00000588275 HERVK_113P62684 666 aa20.51■□□□□ 0.87
LINC01842-201ENST00000588275 TRIM32Q13049 653 aa20.51■□□□□ 0.87
LINC01842-201ENST00000588275 MAGEB6Q8N7X4 407 aa20.51■□□□□ 0.87
LINC01842-201ENST00000588275 DIS3LQ8TF46 1054 aaKnown RBP20.51■□□□□ 0.87
LINC01842-201ENST00000588275 MORF4L1Q9UBU8 362 aa20.51■□□□□ 0.87
LINC01842-201ENST00000588275 NOP58Q9Y2X3 529 aaKnown RBP20.51■□□□□ 0.87
LINC01842-201ENST00000588275 C19orf81C9J6K1 198 aa20.5■□□□□ 0.87
LINC01842-201ENST00000588275 CCAR1Q8IX12 1150 aaKnown RBP20.5■□□□□ 0.87
LINC01842-201ENST00000588275 PAGR1Q9BTK6 254 aa20.5■□□□□ 0.87
LINC01842-201ENST00000588275 CRISPLD2Q9H0B8 497 aa20.5■□□□□ 0.87
LINC01842-201ENST00000588275 GJD2Q9UKL4 321 aa20.5■□□□□ 0.87
LINC01842-201ENST00000588275 EXOC6BQ9Y2D4 811 aa20.5■□□□□ 0.87
LINC01842-201ENST00000588275 PLXNB2O15031 1838 aa20.5■□□□□ 0.87
LINC01842-201ENST00000588275 GH2P01242 217 aa20.49■□□□□ 0.87
LINC01842-201ENST00000588275 HOXA7P31268 230 aaPredicted RBP20.49■□□□□ 0.87
LINC01842-201ENST00000588275 ZYXQ15942 572 aaKnown RBP20.49■□□□□ 0.87
LINC01842-201ENST00000588275 NECAB2Q7Z6G3 386 aa20.49■□□□□ 0.87
LINC01842-201ENST00000588275 METTL16Q86W50 562 aaKnown RBP20.49■□□□□ 0.87
LINC01842-201ENST00000588275 GPRC5AQ8NFJ5 357 aa20.49■□□□□ 0.87
LINC01842-201ENST00000588275 FEZ1Q99689 392 aa20.49■□□□□ 0.87
LINC01842-201ENST00000588275 TXNRD2Q9NNW7 524 aa20.49■□□□□ 0.87
LINC01842-201ENST00000588275 HMX1Q9NP08 348 aaPredicted RBP20.49■□□□□ 0.87
LINC01842-201ENST00000588275 GINM1Q9NU53 330 aa20.49■□□□□ 0.87
LINC01842-201ENST00000588275 CAPN2P17655 700 aa20.48■□□□□ 0.87
LINC01842-201ENST00000588275 PDE3AQ14432 1141 aa20.48■□□□□ 0.87
LINC01842-201ENST00000588275 CEP85Q6P2H3 762 aa20.48■□□□□ 0.87
LINC01842-201ENST00000588275 AACSQ86V21 672 aa20.48■□□□□ 0.87
LINC01842-201ENST00000588275 TRIB2Q92519 343 aa20.48■□□□□ 0.87
LINC01842-201ENST00000588275 NUDT12Q9BQG2 462 aa20.48■□□□□ 0.87
LINC01842-201ENST00000588275 ANTXR1Q9H6X2 564 aa20.48■□□□□ 0.87
LINC01842-201ENST00000588275 CWC22Q9HCG8 908 aaKnown RBP20.48■□□□□ 0.87
LINC01842-201ENST00000588275 ALPK3Q96L96 1907 aa20.48■□□□□ 0.87
LINC01842-201ENST00000588275 RPTORQ8N122 1335 aa20.48■□□□□ 0.87
LINC01842-201ENST00000588275 IGSF3O75054 1194 aa20.47■□□□□ 0.87
LINC01842-201ENST00000588275 MAP3K12Q12852 859 aa20.47■□□□□ 0.87
LINC01842-201ENST00000588275 USP17L2Q6R6M4 530 aa20.47■□□□□ 0.87
LINC01842-201ENST00000588275 BCL11AQ9H165 835 aa20.47■□□□□ 0.87
LINC01842-201ENST00000588275 RANBP2P49792 3224 aaKnown RBP20.46■□□□□ 0.87
LINC01842-201ENST00000588275 ERVK-9P63128 1117 aa20.46■□□□□ 0.87
LINC01842-201ENST00000588275 ERVK-24P63145 666 aa20.46■□□□□ 0.87
LINC01842-201ENST00000588275 RAB3GAP1Q15042 981 aa20.46■□□□□ 0.87
LINC01842-201ENST00000588275 CERS3Q8IU89 383 aa20.46■□□□□ 0.87
LINC01842-201ENST00000588275 ERC1Q8IUD2 1116 aa20.46■□□□□ 0.87
LINC01842-201ENST00000588275 C7orf61Q8IZ16 206 aa20.46■□□□□ 0.87
LINC01842-201ENST00000588275 PANK1Q8TE04 598 aa20.46■□□□□ 0.87
LINC01842-201ENST00000588275 SOCS4Q8WXH5 440 aa20.46■□□□□ 0.87
LINC01842-201ENST00000588275 EMILIN3Q9NT22 766 aa20.46■□□□□ 0.87
LINC01842-201ENST00000588275 DDX60LQ5H9U9 1706 aaKnown RBP20.46■□□□□ 0.87
LINC01842-201ENST00000588275 SZT2Q5T011 3432 aa20.46■□□□□ 0.87
LINC01842-201ENST00000588275 PRKAR2AP13861 404 aaKnown RBP20.45■□□□□ 0.86
LINC01842-201ENST00000588275 MAPK4P31152 587 aa20.45■□□□□ 0.86
LINC01842-201ENST00000588275 ANKLE1Q8NAG6 615 aa20.45■□□□□ 0.86
LINC01842-201ENST00000588275 PORCNQ9H237 461 aa20.45■□□□□ 0.86
LINC01842-201ENST00000588275 IL1RAPL2Q9NP60 686 aa20.45■□□□□ 0.86
LINC01842-201ENST00000588275 RBPJLQ9UBG7 517 aa20.45■□□□□ 0.86
LINC01842-201ENST00000588275 SERPINB13Q9UIV8 391 aa20.45■□□□□ 0.86
LINC01842-201ENST00000588275 NAV1Q8NEY1 1877 aa20.44■□□□□ 0.86
LINC01842-201ENST00000588275 APBB1O00213 710 aa20.44■□□□□ 0.86
LINC01842-201ENST00000588275 ZKSCAN1P17029 563 aaPredicted RBP20.44■□□□□ 0.86
LINC01842-201ENST00000588275 Q3C1V9 767 aa20.44■□□□□ 0.86
LINC01842-201ENST00000588275 GPR142Q7Z601 462 aa20.44■□□□□ 0.86
LINC01842-201ENST00000588275 TTC6Q86TZ1 520 aa20.44■□□□□ 0.86
LINC01842-201ENST00000588275 GTF3C2Q8WUA4 911 aaPredicted RBP20.44■□□□□ 0.86
LINC01842-201ENST00000588275 PRO3102Q9H379 93 aa20.44■□□□□ 0.86
LINC01842-201ENST00000588275 ABCB5Q2M3G0 1257 aa20.43■□□□□ 0.86
LINC01842-201ENST00000588275 CERKLQ49MI3 558 aaPredicted RBP20.43■□□□□ 0.86
LINC01842-201ENST00000588275 WDR78Q5VTH9 848 aa20.43■□□□□ 0.86
LINC01842-201ENST00000588275 MIER1Q8N108 512 aa20.43■□□□□ 0.86
LINC01842-201ENST00000588275 NBPF3Q9H094 633 aa20.43■□□□□ 0.86
LINC01842-201ENST00000588275 STAP2Q9UGK3 403 aa20.43■□□□□ 0.86
LINC01842-201ENST00000588275 ZMYND8Q9ULU4 1186 aaPredicted RBP20.43■□□□□ 0.86
LINC01842-201ENST00000588275 POLR3DP05423 398 aaPredicted RBP20.42■□□□□ 0.86
LINC01842-201ENST00000588275 RGS2P41220 211 aa20.42■□□□□ 0.86
LINC01842-201ENST00000588275 TATDN1Q6P1N9 297 aa20.42■□□□□ 0.86
LINC01842-201ENST00000588275 PLEKHH3Q7Z736 793 aa20.42■□□□□ 0.86
LINC01842-201ENST00000588275 EHD4Q9H223 541 aa20.42■□□□□ 0.86
LINC01842-201ENST00000588275 C11orf49Q9H6J7 331 aa20.42■□□□□ 0.86
LINC01842-201ENST00000588275 CABP5Q9NP86 173 aa20.42■□□□□ 0.86
LINC01842-201ENST00000588275 MAGEB6P1A0A0J9YX57 407 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms