RNA–Protein interactions for RNA: ENST00000588261.1

HDAC5-207, Transcript of histone deacetylase 5, humanhuman

TSL 3

Gene HDAC5, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-207ENST00000588261 COL2A1P02458 1487 aaPredicted RBP17.93■□□□□ 0.46
HDAC5-207ENST00000588261 MYO5AQ9Y4I1 1855 aaKnown RBP17.92■□□□□ 0.46
HDAC5-207ENST00000588261 TRIM75PA6NK02 468 aa17.92■□□□□ 0.46
HDAC5-207ENST00000588261 LDHCP07864 332 aa17.92■□□□□ 0.46
HDAC5-207ENST00000588261 SHROOM1Q2M3G4 852 aaPredicted RBP17.92■□□□□ 0.46
HDAC5-207ENST00000588261 CERS3Q8IU89 383 aa17.92■□□□□ 0.46
HDAC5-207ENST00000588261 RAET1EQ8TD07 263 aa17.92■□□□□ 0.46
HDAC5-207ENST00000588261 SH3RF3Q8TEJ3 882 aaPredicted RBP17.92■□□□□ 0.46
HDAC5-207ENST00000588261 DPF3Q92784 378 aa17.92■□□□□ 0.46
HDAC5-207ENST00000588261 DNAJC18Q9H819 358 aa17.92■□□□□ 0.46
HDAC5-207ENST00000588261 RAI14Q9P0K7 980 aa17.92■□□□□ 0.46
HDAC5-207ENST00000588261 NDUFB9Q9Y6M9 179 aa17.92■□□□□ 0.46
HDAC5-207ENST00000588261 MGAMO43451 1857 aa17.92■□□□□ 0.46
HDAC5-207ENST00000588261 IDH1O75874 414 aaKnown RBP17.91■□□□□ 0.46
HDAC5-207ENST00000588261 FMNL1O95466 1100 aaPredicted RBP17.91■□□□□ 0.46
HDAC5-207ENST00000588261 ZFYP08048 801 aaPredicted RBP17.91■□□□□ 0.46
HDAC5-207ENST00000588261 GADL1Q6ZQY3 521 aa17.91■□□□□ 0.46
HDAC5-207ENST00000588261 PICK1Q9NRD5 415 aa17.91■□□□□ 0.46
HDAC5-207ENST00000588261 MYPNQ86TC9 1320 aa17.91■□□□□ 0.46
HDAC5-207ENST00000588261 MAP4K4O95819 1239 aaPredicted RBP17.9■□□□□ 0.46
HDAC5-207ENST00000588261 GRK4P32298 578 aa17.9■□□□□ 0.46
HDAC5-207ENST00000588261 UBE3CQ15386 1083 aa17.9■□□□□ 0.46
HDAC5-207ENST00000588261 NAA16Q6N069 864 aaPredicted RBP17.9■□□□□ 0.46
HDAC5-207ENST00000588261 UBE2Q1Q7Z7E8 422 aa17.9■□□□□ 0.46
HDAC5-207ENST00000588261 HTATIP2Q9BUP3 242 aa17.9■□□□□ 0.46
HDAC5-207ENST00000588261 LOC285556D6RIA3 1793 aa17.89■□□□□ 0.45
HDAC5-207ENST00000588261 CDK5RAP2Q96SN8 1893 aa17.89■□□□□ 0.45
HDAC5-207ENST00000588261 UBXN2AP68543 259 aa17.89■□□□□ 0.45
HDAC5-207ENST00000588261 BMP2KLQ5H9B9 411 aa17.89■□□□□ 0.45
HDAC5-207ENST00000588261 FASTKD5Q7L8L6 764 aaKnown RBP17.89■□□□□ 0.45
HDAC5-207ENST00000588261 EDC3Q96F86 508 aaKnown RBP17.89■□□□□ 0.45
HDAC5-207ENST00000588261 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.89■□□□□ 0.45
HDAC5-207ENST00000588261 AATFQ9NY61 560 aaKnown RBP eCLIP17.89■□□□□ 0.45
HDAC5-207ENST00000588261 SLC45A1Q9Y2W3 748 aa17.89■□□□□ 0.45
HDAC5-207ENST00000588261 GSPT1P15170 499 aaKnown RBP17.88■□□□□ 0.45
HDAC5-207ENST00000588261 PDE6AP16499 860 aa17.88■□□□□ 0.45
HDAC5-207ENST00000588261 CAPN2P17655 700 aa17.88■□□□□ 0.45
HDAC5-207ENST00000588261 ADD2P35612 726 aa17.88■□□□□ 0.45
HDAC5-207ENST00000588261 CAP2P40123 477 aa17.88■□□□□ 0.45
HDAC5-207ENST00000588261 SLC9C2Q5TAH2 1124 aa17.88■□□□□ 0.45
HDAC5-207ENST00000588261 TEX11Q8IYF3 940 aa17.88■□□□□ 0.45
HDAC5-207ENST00000588261 FSD1Q9BTV5 496 aa17.88■□□□□ 0.45
HDAC5-207ENST00000588261 BIN2Q9UBW5 565 aaPredicted RBP17.88■□□□□ 0.45
HDAC5-207ENST00000588261 AGTPBP1Q9UPW5 1226 aa17.88■□□□□ 0.45
HDAC5-207ENST00000588261 ATAD5Q96QE3 1844 aa17.88■□□□□ 0.45
HDAC5-207ENST00000588261 TRIM6-TRIM34B2RNG4 842 aa17.87■□□□□ 0.45
HDAC5-207ENST00000588261 HIP1O00291 1037 aa17.87■□□□□ 0.45
HDAC5-207ENST00000588261 GJB1P08034 283 aa17.87■□□□□ 0.45
HDAC5-207ENST00000588261 GJA8P48165 433 aa17.87■□□□□ 0.45
HDAC5-207ENST00000588261 FCGRTP55899 365 aa17.87■□□□□ 0.45
HDAC5-207ENST00000588261 SPP2Q13103 211 aa17.87■□□□□ 0.45
HDAC5-207ENST00000588261 CHRDL2Q6WN34 429 aa17.87■□□□□ 0.45
HDAC5-207ENST00000588261 MAGEB6Q8N7X4 407 aa17.87■□□□□ 0.45
HDAC5-207ENST00000588261 NR2E3Q9Y5X4 410 aa17.87■□□□□ 0.45
HDAC5-207ENST00000588261 TCRBV5S4A2TA0A5A2 114 aa17.86■□□□□ 0.45
HDAC5-207ENST00000588261 RNF113AO15541 343 aaKnown RBP17.86■□□□□ 0.45
HDAC5-207ENST00000588261 PEX10O60683 326 aa17.86■□□□□ 0.45
HDAC5-207ENST00000588261 BAG3O95817 575 aa17.86■□□□□ 0.45
HDAC5-207ENST00000588261 CCL5P13501 91 aa17.86■□□□□ 0.45
HDAC5-207ENST00000588261 PLCG2P16885 1265 aa17.86■□□□□ 0.45
HDAC5-207ENST00000588261 FLT3LGP49771 235 aa17.86■□□□□ 0.45
HDAC5-207ENST00000588261 PPP4CP60510 307 aa17.86■□□□□ 0.45
HDAC5-207ENST00000588261 METTL16Q86W50 562 aaKnown RBP17.86■□□□□ 0.45
HDAC5-207ENST00000588261 ANKRD13CQ8N6S4 541 aa17.86■□□□□ 0.45
HDAC5-207ENST00000588261 RNF208Q9H0X6 261 aa17.86■□□□□ 0.45
HDAC5-207ENST00000588261 UNC93B1Q9H1C4 597 aa17.86■□□□□ 0.45
HDAC5-207ENST00000588261 FLT1P17948 1338 aa17.86■□□□□ 0.45
HDAC5-207ENST00000588261 FOCADQ5VW36 1801 aa17.86■□□□□ 0.45
HDAC5-207ENST00000588261 DOCK3Q8IZD9 2030 aa17.86■□□□□ 0.45
HDAC5-207ENST00000588261 ELNP15502 786 aa17.85■□□□□ 0.45
HDAC5-207ENST00000588261 SDSP20132 328 aa17.85■□□□□ 0.45
HDAC5-207ENST00000588261 CYP7A1P22680 504 aa17.85■□□□□ 0.45
HDAC5-207ENST00000588261 HMGCS2P54868 508 aa17.85■□□□□ 0.45
HDAC5-207ENST00000588261 DYNLL1P63167 89 aaKnown RBP17.85■□□□□ 0.45
HDAC5-207ENST00000588261 POTEEQ6S8J3 1075 aa17.85■□□□□ 0.45
HDAC5-207ENST00000588261 MAPKAPK5Q8IW41 473 aa17.85■□□□□ 0.45
HDAC5-207ENST00000588261 ZNF280CQ8ND82 737 aa17.85■□□□□ 0.45
HDAC5-207ENST00000588261 SLAIN1Q8ND83 568 aa17.85■□□□□ 0.45
HDAC5-207ENST00000588261 TGFBRAP1Q8WUH2 860 aa17.85■□□□□ 0.45
HDAC5-207ENST00000588261 APPBP2Q92624 585 aa17.85■□□□□ 0.45
HDAC5-207ENST00000588261 NOL10Q9BSC4 688 aaKnown RBP17.85■□□□□ 0.45
HDAC5-207ENST00000588261 ZNF532Q9HCE3 1301 aa17.85■□□□□ 0.45
HDAC5-207ENST00000588261 SH3D19Q5HYK7 790 aa17.84■□□□□ 0.45
HDAC5-207ENST00000588261 PROCA1Q8NCQ7 364 aaPredicted RBP17.84■□□□□ 0.45
HDAC5-207ENST00000588261 RILPL2Q969X0 211 aa17.84■□□□□ 0.45
HDAC5-207ENST00000588261 PALD1Q9ULE6 856 aa17.84■□□□□ 0.45
HDAC5-207ENST00000588261 SZT2Q5T011 3432 aa17.84■□□□□ 0.45
HDAC5-207ENST00000588261 RBM27Q9P2N5 1060 aaKnown RBP17.83■□□□□ 0.44
HDAC5-207ENST00000588261 HERC5Q9UII4 1024 aaKnown RBP17.83■□□□□ 0.44
HDAC5-207ENST00000588261 USP17L5A8MUK1 530 aa17.82■□□□□ 0.44
HDAC5-207ENST00000588261 ADCY3O60266 1144 aa17.82■□□□□ 0.44
HDAC5-207ENST00000588261 FAM110CQ1W6H9 321 aa17.82■□□□□ 0.44
HDAC5-207ENST00000588261 ZMYM1Q5SVZ6 1142 aa17.82■□□□□ 0.44
HDAC5-207ENST00000588261 SKAP1Q86WV1 359 aa17.82■□□□□ 0.44
HDAC5-207ENST00000588261 SMCR8Q8TEV9 937 aaPredicted RBP17.82■□□□□ 0.44
HDAC5-207ENST00000588261 RIOK1Q9BRS2 568 aaKnown RBP17.82■□□□□ 0.44
HDAC5-207ENST00000588261 ASCC2Q9H1I8 757 aaPredicted RBP17.82■□□□□ 0.44
HDAC5-207ENST00000588261 HELLSQ9NRZ9 838 aa17.82■□□□□ 0.44
HDAC5-207ENST00000588261 PI4KBQ9UBF8 816 aa17.82■□□□□ 0.44
HDAC5-207ENST00000588261 PLXNB2O15031 1838 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms