RNA–Protein interactions for RNA: ENST00000588259.5

TMED1-203, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 5

Gene TMED1, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-203ENST00000588259 SHROOM1Q2M3G4 852 aaPredicted RBP20.64■□□□□ 0.89
TMED1-203ENST00000588259 FOXP4Q8IVH2 680 aaPredicted RBP20.64■□□□□ 0.89
TMED1-203ENST00000588259 DNAJC18Q9H819 358 aa20.64■□□□□ 0.89
TMED1-203ENST00000588259 IL1RAPL2Q9NP60 686 aa20.64■□□□□ 0.89
TMED1-203ENST00000588259 FARP2O94887 1054 aaPredicted RBP20.63■□□□□ 0.89
TMED1-203ENST00000588259 MAP3K12Q12852 859 aa20.63■□□□□ 0.89
TMED1-203ENST00000588259 U2AF1L4Q8WU68 220 aaKnown RBP20.63■□□□□ 0.89
TMED1-203ENST00000588259 WDR18Q9BV38 432 aa20.63■□□□□ 0.89
TMED1-203ENST00000588259 PCDH10Q9P2E7 1040 aa20.63■□□□□ 0.89
TMED1-203ENST00000588259 ZBTB21Q9ULJ3 1066 aa20.63■□□□□ 0.89
TMED1-203ENST00000588259 IGSF3O75054 1194 aa20.62■□□□□ 0.89
TMED1-203ENST00000588259 BACE1P56817 501 aa20.62■□□□□ 0.89
TMED1-203ENST00000588259 JAG1P78504 1218 aa20.62■□□□□ 0.89
TMED1-203ENST00000588259 IRF5Q13568 498 aa20.62■□□□□ 0.89
TMED1-203ENST00000588259 HSP90AB4PQ58FF6 505 aa20.62■□□□□ 0.89
TMED1-203ENST00000588259 SH3D19Q5HYK7 790 aa20.62■□□□□ 0.89
TMED1-203ENST00000588259 PXYLP1Q8TE99 480 aa20.62■□□□□ 0.89
TMED1-203ENST00000588259 ANTXR1Q9H6X2 564 aa20.62■□□□□ 0.89
TMED1-203ENST00000588259 TRIOBPQ9H2D6 2365 aa20.61■□□□□ 0.89
TMED1-203ENST00000588259 MS4A1P11836 297 aa20.61■□□□□ 0.89
TMED1-203ENST00000588259 CERS3Q8IU89 383 aa20.61■□□□□ 0.89
TMED1-203ENST00000588259 DEFB118Q96PH6 123 aa20.61■□□□□ 0.89
TMED1-203ENST00000588259 FEZ1Q99689 392 aa20.61■□□□□ 0.89
TMED1-203ENST00000588259 HTATIP2Q9BUP3 242 aa20.61■□□□□ 0.89
TMED1-203ENST00000588259 USP17L10C9JJH3 530 aa20.6■□□□□ 0.89
TMED1-203ENST00000588259 TFRCP02786 760 aaKnown RBP20.6■□□□□ 0.89
TMED1-203ENST00000588259 COLQQ9Y215 455 aaPredicted RBP20.6■□□□□ 0.89
TMED1-203ENST00000588259 NAV1Q8NEY1 1877 aa20.6■□□□□ 0.89
TMED1-203ENST00000588259 C19orf81C9J6K1 198 aa20.59■□□□□ 0.89
TMED1-203ENST00000588259 SGPL1O95470 568 aa20.59■□□□□ 0.89
TMED1-203ENST00000588259 GH2P01242 217 aa20.59■□□□□ 0.89
TMED1-203ENST00000588259 METTL16Q86W50 562 aaKnown RBP20.59■□□□□ 0.89
TMED1-203ENST00000588259 CCAR1Q8IX12 1150 aaKnown RBP20.59■□□□□ 0.89
TMED1-203ENST00000588259 RHPN1Q8TCX5 695 aa20.59■□□□□ 0.89
TMED1-203ENST00000588259 GINM1Q9NU53 330 aa20.59■□□□□ 0.89
TMED1-203ENST00000588259 HMMRO75330 724 aa20.58■□□□□ 0.89
TMED1-203ENST00000588259 HERVK_113P62684 666 aa20.58■□□□□ 0.89
TMED1-203ENST00000588259 ZYXQ15942 572 aaKnown RBP20.58■□□□□ 0.89
TMED1-203ENST00000588259 CLASRPQ8N2M8 674 aaKnown RBP20.58■□□□□ 0.89
TMED1-203ENST00000588259 DNAJC2Q99543 621 aaKnown RBP20.58■□□□□ 0.89
TMED1-203ENST00000588259 P2RX7Q99572 595 aaKnown RBP20.58■□□□□ 0.89
TMED1-203ENST00000588259 SERPINB13Q9UIV8 391 aa20.58■□□□□ 0.89
TMED1-203ENST00000588259 MAGEB6P1A0A0J9YX57 407 aa20.57■□□□□ 0.88
TMED1-203ENST00000588259 PEX10O60683 326 aa20.57■□□□□ 0.88
TMED1-203ENST00000588259 HMGCRP04035 888 aa20.57■□□□□ 0.88
TMED1-203ENST00000588259 IFIT2P09913 472 aaKnown RBP20.57■□□□□ 0.88
TMED1-203ENST00000588259 RAB3GAP1Q15042 981 aa20.57■□□□□ 0.88
TMED1-203ENST00000588259 TTF1Q15361 905 aaPredicted RBP20.57■□□□□ 0.88
TMED1-203ENST00000588259 TTC6Q86TZ1 520 aa20.57■□□□□ 0.88
TMED1-203ENST00000588259 PAGR1Q9BTK6 254 aa20.57■□□□□ 0.88
TMED1-203ENST00000588259 COG6Q9Y2V7 657 aa20.57■□□□□ 0.88
TMED1-203ENST00000588259 HOXA7P31268 230 aaPredicted RBP20.56■□□□□ 0.88
TMED1-203ENST00000588259 USP17L2Q6R6M4 530 aa20.56■□□□□ 0.88
TMED1-203ENST00000588259 CHRDL2Q6WN34 429 aa20.56■□□□□ 0.88
TMED1-203ENST00000588259 UBE2Q1Q7Z7E8 422 aa20.56■□□□□ 0.88
TMED1-203ENST00000588259 GPRC5AQ8NFJ5 357 aa20.56■□□□□ 0.88
TMED1-203ENST00000588259 KIF1BPQ96EK5 621 aa20.56■□□□□ 0.88
TMED1-203ENST00000588259 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.56■□□□□ 0.88
TMED1-203ENST00000588259 CWC22Q9HCG8 908 aaKnown RBP20.56■□□□□ 0.88
TMED1-203ENST00000588259 MORF4L1Q9UBU8 362 aa20.56■□□□□ 0.88
TMED1-203ENST00000588259 DDX19BQ9UMR2 479 aa20.56■□□□□ 0.88
TMED1-203ENST00000588259 GOLIM4O00461 696 aa20.55■□□□□ 0.88
TMED1-203ENST00000588259 POLR3DP05423 398 aaPredicted RBP20.55■□□□□ 0.88
TMED1-203ENST00000588259 PDE3AQ14432 1141 aa20.55■□□□□ 0.88
TMED1-203ENST00000588259 SLC9C2Q5TAH2 1124 aa20.55■□□□□ 0.88
TMED1-203ENST00000588259 CRNKL1Q9BZJ0 848 aaKnown RBP20.55■□□□□ 0.88
TMED1-203ENST00000588259 PAK6Q9NQU5 681 aaPredicted RBP20.55■□□□□ 0.88
TMED1-203ENST00000588259 NR2E3Q9Y5X4 410 aa20.55■□□□□ 0.88
TMED1-203ENST00000588259 PLXNB2O15031 1838 aa20.55■□□□□ 0.88
TMED1-203ENST00000588259 PDE6AP16499 860 aa20.54■□□□□ 0.88
TMED1-203ENST00000588259 CYP2B6P20813 491 aa20.54■□□□□ 0.88
TMED1-203ENST00000588259 ABCB5Q2M3G0 1257 aa20.54■□□□□ 0.88
TMED1-203ENST00000588259 CERKLQ49MI3 558 aaPredicted RBP20.54■□□□□ 0.88
TMED1-203ENST00000588259 TMED8Q6PL24 325 aaPredicted RBP20.54■□□□□ 0.88
TMED1-203ENST00000588259 EHD4Q9H223 541 aa20.54■□□□□ 0.88
TMED1-203ENST00000588259 TXNRD2Q9NNW7 524 aa20.54■□□□□ 0.88
TMED1-203ENST00000588259 CABP5Q9NP86 173 aa20.54■□□□□ 0.88
TMED1-203ENST00000588259 EMILIN3Q9NT22 766 aa20.54■□□□□ 0.88
TMED1-203ENST00000588259 DDX60LQ5H9U9 1706 aaKnown RBP20.53■□□□□ 0.88
TMED1-203ENST00000588259 FXR1P51114 621 aaKnown RBP eCLIP20.53■□□□□ 0.88
TMED1-203ENST00000588259 RPAP2Q8IXW5 612 aaPredicted RBP20.53■□□□□ 0.88
TMED1-203ENST00000588259 SOCS4Q8WXH5 440 aa20.53■□□□□ 0.88
TMED1-203ENST00000588259 NUDT12Q9BQG2 462 aa20.53■□□□□ 0.88
TMED1-203ENST00000588259 GJD2Q9UKL4 321 aa20.53■□□□□ 0.88
TMED1-203ENST00000588259 EVI5O60447 810 aa20.52■□□□□ 0.88
TMED1-203ENST00000588259 MAPK4P31152 587 aa20.52■□□□□ 0.88
TMED1-203ENST00000588259 ERVK-9P63128 1117 aa20.52■□□□□ 0.88
TMED1-203ENST00000588259 ERVK-24P63145 666 aa20.52■□□□□ 0.88
TMED1-203ENST00000588259 TRIM32Q13049 653 aa20.52■□□□□ 0.88
TMED1-203ENST00000588259 TATDN1Q6P1N9 297 aa20.52■□□□□ 0.88
TMED1-203ENST00000588259 GTF3C2Q8WUA4 911 aaPredicted RBP20.52■□□□□ 0.88
TMED1-203ENST00000588259 RIOK1Q9BRS2 568 aaKnown RBP20.52■□□□□ 0.88
TMED1-203ENST00000588259 HMX1Q9NP08 348 aaPredicted RBP20.52■□□□□ 0.88
TMED1-203ENST00000588259 MCM9Q9NXL9 1143 aa20.52■□□□□ 0.88
TMED1-203ENST00000588259 MYH8P13535 1937 aa20.52■□□□□ 0.88
TMED1-203ENST00000588259 ZNF532Q9HCE3 1301 aa20.52■□□□□ 0.87
TMED1-203ENST00000588259 MPHOSPH10O00566 681 aaKnown RBP20.51■□□□□ 0.87
TMED1-203ENST00000588259 PLCD1P51178 756 aa20.51■□□□□ 0.87
TMED1-203ENST00000588259 WDR78Q5VTH9 848 aa20.51■□□□□ 0.87
TMED1-203ENST00000588259 TRIB2Q92519 343 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms