RNA–Protein interactions for RNA: ENST00000587721.1

RDH13-209, Transcript of retinol dehydrogenase 13, humanhuman

TSL 4

Gene RDH13, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-209ENST00000587721 USP5P45974 858 aa16.76■□□□□ 0.27
RDH13-209ENST00000587721 MAP3K12Q12852 859 aa16.76■□□□□ 0.27
RDH13-209ENST00000587721 NECAB2Q7Z6G3 386 aa16.76■□□□□ 0.27
RDH13-209ENST00000587721 ADGRA1Q86SQ6 560 aa16.76■□□□□ 0.27
RDH13-209ENST00000587721 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.76■□□□□ 0.27
RDH13-209ENST00000587721 CCDC8Q9H0W5 538 aaPredicted RBP16.76■□□□□ 0.27
RDH13-209ENST00000587721 HMX1Q9NP08 348 aaPredicted RBP16.76■□□□□ 0.27
RDH13-209ENST00000587721 PIH1D3Q9NQM4 214 aaKnown RBP16.76■□□□□ 0.27
RDH13-209ENST00000587721 ZBTB21Q9ULJ3 1066 aa16.76■□□□□ 0.27
RDH13-209ENST00000587721 RPTORQ8N122 1335 aa16.75■□□□□ 0.27
RDH13-209ENST00000587721 GDF11O95390 407 aa16.75■□□□□ 0.27
RDH13-209ENST00000587721 PDE3AQ14432 1141 aa16.75■□□□□ 0.27
RDH13-209ENST00000587721 HSP90AB4PQ58FF6 505 aa16.75■□□□□ 0.27
RDH13-209ENST00000587721 TTC6Q86TZ1 520 aa16.75■□□□□ 0.27
RDH13-209ENST00000587721 ANKLE1Q8NAG6 615 aa16.75■□□□□ 0.27
RDH13-209ENST00000587721 SOCS4Q8WXH5 440 aa16.75■□□□□ 0.27
RDH13-209ENST00000587721 EAF2Q96CJ1 260 aaPredicted RBP16.75■□□□□ 0.27
RDH13-209ENST00000587721 P2RX7Q99572 595 aaKnown RBP16.75■□□□□ 0.27
RDH13-209ENST00000587721 NUDT12Q9BQG2 462 aa16.75■□□□□ 0.27
RDH13-209ENST00000587721 CRISPLD2Q9H0B8 497 aa16.75■□□□□ 0.27
RDH13-209ENST00000587721 SAP30BPQ9UHR5 308 aaKnown RBP16.75■□□□□ 0.27
RDH13-209ENST00000587721 MS4A1P11836 297 aa16.74■□□□□ 0.27
RDH13-209ENST00000587721 MAPK4P31152 587 aa16.74■□□□□ 0.27
RDH13-209ENST00000587721 HERVK_113P62684 666 aa16.74■□□□□ 0.27
RDH13-209ENST00000587721 USP17L2Q6R6M4 530 aa16.74■□□□□ 0.27
RDH13-209ENST00000587721 TRMT44Q8IYL2 757 aaKnown RBP16.74■□□□□ 0.27
RDH13-209ENST00000587721 MAGEB6Q8N7X4 407 aa16.74■□□□□ 0.27
RDH13-209ENST00000587721 DNAJC18Q9H819 358 aa16.74■□□□□ 0.27
RDH13-209ENST00000587721 RBM27Q9P2N5 1060 aaKnown RBP16.74■□□□□ 0.27
RDH13-209ENST00000587721 GJD2Q9UKL4 321 aa16.74■□□□□ 0.27
RDH13-209ENST00000587721 LOC285556D6RIA3 1793 aa16.74■□□□□ 0.27
RDH13-209ENST00000587721 MAST2Q6P0Q8 1798 aa16.74■□□□□ 0.27
RDH13-209ENST00000587721 DYNLL1P63167 89 aaKnown RBP16.73■□□□□ 0.27
RDH13-209ENST00000587721 AACSQ86V21 672 aa16.73■□□□□ 0.27
RDH13-209ENST00000587721 MIGA1Q8NAN2 632 aa16.73■□□□□ 0.27
RDH13-209ENST00000587721 PAWRQ96IZ0 340 aaKnown RBP16.73■□□□□ 0.27
RDH13-209ENST00000587721 FEZ1Q99689 392 aa16.73■□□□□ 0.27
RDH13-209ENST00000587721 CWC22Q9HCG8 908 aaKnown RBP16.73■□□□□ 0.27
RDH13-209ENST00000587721 SERPINB13Q9UIV8 391 aa16.73■□□□□ 0.27
RDH13-209ENST00000587721 BRCA2P51587 3418 aa16.72■□□□□ 0.27
RDH13-209ENST00000587721 XRCC5P13010 732 aaKnown RBP16.72■□□□□ 0.27
RDH13-209ENST00000587721 CYP2B6P20813 491 aa16.72■□□□□ 0.27
RDH13-209ENST00000587721 USP14P54578 494 aa16.72■□□□□ 0.27
RDH13-209ENST00000587721 TTF1Q15361 905 aaPredicted RBP16.72■□□□□ 0.27
RDH13-209ENST00000587721 CEP85Q6P2H3 762 aa16.72■□□□□ 0.27
RDH13-209ENST00000587721 EHD4Q9H223 541 aa16.72■□□□□ 0.27
RDH13-209ENST00000587721 CABP5Q9NP86 173 aa16.72■□□□□ 0.27
RDH13-209ENST00000587721 TLR7Q9NYK1 1049 aaKnown RBP16.72■□□□□ 0.27
RDH13-209ENST00000587721 MKI67P46013 3256 aaKnown RBP16.72■□□□□ 0.27
RDH13-209ENST00000587721 ATAD5Q96QE3 1844 aa16.71■□□□□ 0.27
RDH13-209ENST00000587721 A0A1W2PPC1 479 aa16.71■□□□□ 0.27
RDH13-209ENST00000587721 GLRX3O76003 335 aaKnown RBP16.71■□□□□ 0.27
RDH13-209ENST00000587721 GH2P01242 217 aa16.71■□□□□ 0.27
RDH13-209ENST00000587721 RLBP1P12271 317 aa16.71■□□□□ 0.27
RDH13-209ENST00000587721 CCNA1P78396 465 aa16.71■□□□□ 0.27
RDH13-209ENST00000587721 JAG1P78504 1218 aa16.71■□□□□ 0.27
RDH13-209ENST00000587721 TATDN1Q6P1N9 297 aa16.71■□□□□ 0.27
RDH13-209ENST00000587721 NBPF3Q9H094 633 aa16.71■□□□□ 0.27
RDH13-209ENST00000587721 USP17L15C9J2P7 530 aa16.7■□□□□ 0.26
RDH13-209ENST00000587721 USP17L13C9JLJ4 530 aa16.7■□□□□ 0.26
RDH13-209ENST00000587721 USP17L11C9JVI0 530 aa16.7■□□□□ 0.26
RDH13-209ENST00000587721 USP17L18D6R9N7 530 aa16.7■□□□□ 0.26
RDH13-209ENST00000587721 USP17L22D6RA61 530 aa16.7■□□□□ 0.26
RDH13-209ENST00000587721 USP17L17D6RBQ6 530 aa16.7■□□□□ 0.26
RDH13-209ENST00000587721 USP17L19D6RCP7 530 aa16.7■□□□□ 0.26
RDH13-209ENST00000587721 USP17L20D6RJB6 530 aa16.7■□□□□ 0.26
RDH13-209ENST00000587721 ZKSCAN1P17029 563 aaPredicted RBP16.7■□□□□ 0.26
RDH13-209ENST00000587721 RGS2P41220 211 aa16.7■□□□□ 0.26
RDH13-209ENST00000587721 ERVK-9P63128 1117 aa16.7■□□□□ 0.26
RDH13-209ENST00000587721 ERVK-24P63145 666 aa16.7■□□□□ 0.26
RDH13-209ENST00000587721 USP17L24Q0WX57 530 aa16.7■□□□□ 0.26
RDH13-209ENST00000587721 RAB3GAP1Q15042 981 aa16.7■□□□□ 0.26
RDH13-209ENST00000587721 CERKLQ49MI3 558 aaPredicted RBP16.7■□□□□ 0.26
RDH13-209ENST00000587721 PAGR1Q9BTK6 254 aa16.7■□□□□ 0.26
RDH13-209ENST00000587721 EMILIN3Q9NT22 766 aa16.7■□□□□ 0.26
RDH13-209ENST00000587721 RBPJLQ9UBG7 517 aa16.7■□□□□ 0.26
RDH13-209ENST00000587721 EXOC6BQ9Y2D4 811 aa16.7■□□□□ 0.26
RDH13-209ENST00000587721 HMMRO75330 724 aa16.69■□□□□ 0.26
RDH13-209ENST00000587721 POLR3DP05423 398 aaPredicted RBP16.69■□□□□ 0.26
RDH13-209ENST00000587721 ABCB5Q2M3G0 1257 aa16.69■□□□□ 0.26
RDH13-209ENST00000587721 CLASRPQ8N2M8 674 aaKnown RBP16.69■□□□□ 0.26
RDH13-209ENST00000587721 TRIB2Q92519 343 aa16.69■□□□□ 0.26
RDH13-209ENST00000587721 C12orf42Q96LP6 360 aa16.69■□□□□ 0.26
RDH13-209ENST00000587721 ANTXR1Q9H6X2 564 aa16.69■□□□□ 0.26
RDH13-209ENST00000587721 TXNRD2Q9NNW7 524 aa16.69■□□□□ 0.26
RDH13-209ENST00000587721 CEP290O15078 2479 aa16.68■□□□□ 0.26
RDH13-209ENST00000587721 MAGEB6P1A0A0J9YX57 407 aa16.68■□□□□ 0.26
RDH13-209ENST00000587721 PRKAR2AP13861 404 aaKnown RBP16.68■□□□□ 0.26
RDH13-209ENST00000587721 GPR142Q7Z601 462 aa16.68■□□□□ 0.26
RDH13-209ENST00000587721 PLEKHH3Q7Z736 793 aa16.68■□□□□ 0.26
RDH13-209ENST00000587721 RHPN1Q8TCX5 695 aa16.68■□□□□ 0.26
RDH13-209ENST00000587721 CRNKL1Q9BZJ0 848 aaKnown RBP16.68■□□□□ 0.26
RDH13-209ENST00000587721 CHMP4BQ9H444 224 aaKnown RBP16.68■□□□□ 0.26
RDH13-209ENST00000587721 C11orf49Q9H6J7 331 aa16.68■□□□□ 0.26
RDH13-209ENST00000587721 RABGAP1Q9Y3P9 1069 aa16.68■□□□□ 0.26
RDH13-209ENST00000587721 IFIT2P09913 472 aaKnown RBP16.67■□□□□ 0.26
RDH13-209ENST00000587721 TRIM32Q13049 653 aa16.67■□□□□ 0.26
RDH13-209ENST00000587721 ZYXQ15942 572 aaKnown RBP16.67■□□□□ 0.26
RDH13-209ENST00000587721 SHROOM1Q2M3G4 852 aaPredicted RBP16.67■□□□□ 0.26
RDH13-209ENST00000587721 Q3C1V9 767 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms