RNA–Protein interactions for RNA: ENST00000587580.1

CHAF1A-205, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 3

Gene CHAF1A, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-205ENST00000587580 STAP2Q9UGK3 403 aa28.28■■■□□ 2.12
CHAF1A-205ENST00000587580 ZBTB21Q9ULJ3 1066 aa28.28■■■□□ 2.12
CHAF1A-205ENST00000587580 SLC4A4Q9Y6R1 1079 aa28.28■■■□□ 2.12
CHAF1A-205ENST00000587580 SP3Q02447 781 aa28.27■■■□□ 2.12
CHAF1A-205ENST00000587580 SPP2Q13103 211 aa28.27■■■□□ 2.12
CHAF1A-205ENST00000587580 TATDN1Q6P1N9 297 aa28.27■■■□□ 2.12
CHAF1A-205ENST00000587580 GINM1Q9NU53 330 aa28.27■■■□□ 2.12
CHAF1A-205ENST00000587580 TLR2O60603 784 aa28.26■■■□□ 2.11
CHAF1A-205ENST00000587580 CYP2D6P10635 497 aa28.26■■■□□ 2.11
CHAF1A-205ENST00000587580 EVX2Q03828 476 aa28.26■■■□□ 2.11
CHAF1A-205ENST00000587580 OSBP2Q969R2 916 aa28.26■■■□□ 2.11
CHAF1A-205ENST00000587580 ERO1AQ96HE7 468 aa28.26■■■□□ 2.11
CHAF1A-205ENST00000587580 DDRGK1Q96HY6 314 aa28.26■■■□□ 2.11
CHAF1A-205ENST00000587580 LOC285556D6RIA3 1793 aa28.26■■■□□ 2.11
CHAF1A-205ENST00000587580 CHD1LQ86WJ1 897 aa28.25■■■□□ 2.11
CHAF1A-205ENST00000587580 CD99L2Q8TCZ2 262 aa28.25■■■□□ 2.11
CHAF1A-205ENST00000587580 GH2P01242 217 aa28.24■■■□□ 2.11
CHAF1A-205ENST00000587580 SHMT1P34896 483 aa28.24■■■□□ 2.11
CHAF1A-205ENST00000587580 NUCB1Q02818 461 aa28.24■■■□□ 2.11
CHAF1A-205ENST00000587580 GABPAQ06546 454 aa28.24■■■□□ 2.11
CHAF1A-205ENST00000587580 STRBPQ96SI9 672 aaKnown RBP28.24■■■□□ 2.11
CHAF1A-205ENST00000587580 PARK7Q99497 189 aaKnown RBP28.24■■■□□ 2.11
CHAF1A-205ENST00000587580 HMGCS2P54868 508 aa28.23■■■□□ 2.11
CHAF1A-205ENST00000587580 CERKLQ49MI3 558 aaPredicted RBP28.23■■■□□ 2.11
CHAF1A-205ENST00000587580 AMOTL1Q8IY63 956 aa28.23■■■□□ 2.11
CHAF1A-205ENST00000587580 WDR18Q9BV38 432 aa28.23■■■□□ 2.11
CHAF1A-205ENST00000587580 MYH8P13535 1937 aa28.22■■■□□ 2.11
CHAF1A-205ENST00000587580 M0R2C6 588 aa28.22■■■□□ 2.11
CHAF1A-205ENST00000587580 GPAA1O43292 621 aa28.22■■■□□ 2.11
CHAF1A-205ENST00000587580 PKN2Q16513 984 aaKnown RBP28.22■■■□□ 2.11
CHAF1A-205ENST00000587580 PROCA1Q8NCQ7 364 aaPredicted RBP28.22■■■□□ 2.11
CHAF1A-205ENST00000587580 AGTPBP1Q9UPW5 1226 aa28.22■■■□□ 2.11
CHAF1A-205ENST00000587580 TRIM17Q9Y577 477 aa28.22■■■□□ 2.11
CHAF1A-205ENST00000587580 ADGRA2Q96PE1 1338 aa28.21■■■□□ 2.11
CHAF1A-205ENST00000587580 CYP2C8P10632 490 aa28.21■■■□□ 2.11
CHAF1A-205ENST00000587580 MTMR2Q13614 643 aa28.21■■■□□ 2.11
CHAF1A-205ENST00000587580 ABCB5Q2M3G0 1257 aa28.21■■■□□ 2.11
CHAF1A-205ENST00000587580 CPA4Q9UI42 421 aa28.21■■■□□ 2.11
CHAF1A-205ENST00000587580 SLC45A1Q9Y2W3 748 aa28.21■■■□□ 2.11
CHAF1A-205ENST00000587580 CYP2D7A0A087X1C5 515 aa28.2■■■□□ 2.1
CHAF1A-205ENST00000587580 USP17L12C9JPN9 530 aa28.2■■■□□ 2.1
CHAF1A-205ENST00000587580 USP17L21D6R901 530 aa28.2■■■□□ 2.1
CHAF1A-205ENST00000587580 SH3D19Q5HYK7 790 aa28.2■■■□□ 2.1
CHAF1A-205ENST00000587580 TREML2Q5T2D2 321 aa28.2■■■□□ 2.1
CHAF1A-205ENST00000587580 C12orf60Q5U649 245 aa28.2■■■□□ 2.1
CHAF1A-205ENST00000587580 OTOP1Q7RTM1 612 aa28.2■■■□□ 2.1
CHAF1A-205ENST00000587580 SLC44A5Q8NCS7 719 aa28.2■■■□□ 2.1
CHAF1A-205ENST00000587580 EVI5LQ96CN4 794 aa28.2■■■□□ 2.1
CHAF1A-205ENST00000587580 DYNLL2Q96FJ2 89 aa28.2■■■□□ 2.1
CHAF1A-205ENST00000587580 CABP5Q9NP86 173 aa28.2■■■□□ 2.1
CHAF1A-205ENST00000587580 SWAP70Q9UH65 585 aa28.2■■■□□ 2.1
CHAF1A-205ENST00000587580 BACE1P56817 501 aa28.19■■■□□ 2.1
CHAF1A-205ENST00000587580 RAB3GAP1Q15042 981 aa28.19■■■□□ 2.1
CHAF1A-205ENST00000587580 C17orf99Q6UX52 265 aa28.19■■■□□ 2.1
CHAF1A-205ENST00000587580 SEC62Q99442 399 aaKnown RBP28.19■■■□□ 2.1
CHAF1A-205ENST00000587580 ARPP21Q9UBL0 812 aaPredicted RBP28.19■■■□□ 2.1
CHAF1A-205ENST00000587580 GSG1L2A8MUP6 293 aa28.18■■■□□ 2.1
CHAF1A-205ENST00000587580 ZMYM1Q5SVZ6 1142 aa28.18■■■□□ 2.1
CHAF1A-205ENST00000587580 CTR9Q6PD62 1173 aa28.18■■■□□ 2.1
CHAF1A-205ENST00000587580 EFCC1Q9HA90 598 aa28.18■■■□□ 2.1
CHAF1A-205ENST00000587580 ZSWIM8A7E2V4 1837 aa28.18■■■□□ 2.1
CHAF1A-205ENST00000587580 CCDC85CA6NKD9 419 aa28.17■■■□□ 2.1
CHAF1A-205ENST00000587580 USP17L10C9JJH3 530 aa28.17■■■□□ 2.1
CHAF1A-205ENST00000587580 SMIM22K7EJ46 135 aa28.17■■■□□ 2.1
CHAF1A-205ENST00000587580 GNAT2P19087 354 aa28.17■■■□□ 2.1
CHAF1A-205ENST00000587580 CAP1Q01518 475 aa28.17■■■□□ 2.1
CHAF1A-205ENST00000587580 FBXO46Q6PJ61 603 aaPredicted RBP28.17■■■□□ 2.1
CHAF1A-205ENST00000587580 PLEKHM2Q8IWE5 1019 aa28.17■■■□□ 2.1
CHAF1A-205ENST00000587580 TMOD4Q9NZQ9 345 aa28.17■■■□□ 2.1
CHAF1A-205ENST00000587580 TAOK2Q9UL54 1235 aa28.17■■■□□ 2.1
CHAF1A-205ENST00000587580 C19orf81C9J6K1 198 aa28.16■■■□□ 2.1
CHAF1A-205ENST00000587580 MPHOSPH10O00566 681 aaKnown RBP28.16■■■□□ 2.1
CHAF1A-205ENST00000587580 GIMAP6Q6P9H5 292 aa28.16■■■□□ 2.1
CHAF1A-205ENST00000587580 SMCR8Q8TEV9 937 aaPredicted RBP28.16■■■□□ 2.1
CHAF1A-205ENST00000587580 PNMA3Q9UL41 463 aa28.16■■■□□ 2.1
CHAF1A-205ENST00000587580 LACTBP83111 547 aaPredicted RBP28.15■■■□□ 2.1
CHAF1A-205ENST00000587580 PABPC4Q13310 644 aaKnown RBP eCLIP28.15■■■□□ 2.1
CHAF1A-205ENST00000587580 KIF22Q14807 665 aa28.15■■■□□ 2.1
CHAF1A-205ENST00000587580 EPB41L4AQ9HCS5 686 aaPredicted RBP28.15■■■□□ 2.1
CHAF1A-205ENST00000587580 HPS5Q9UPZ3 1129 aa28.15■■■□□ 2.1
CHAF1A-205ENST00000587580 TRIM6-TRIM34B2RNG4 842 aa28.14■■■□□ 2.1
CHAF1A-205ENST00000587580 APPP05067 770 aa28.14■■■□□ 2.1
CHAF1A-205ENST00000587580 TDO2P48775 406 aa28.14■■■□□ 2.1
CHAF1A-205ENST00000587580 CDK8P49336 464 aa28.14■■■□□ 2.1
CHAF1A-205ENST00000587580 ARHGEF6Q15052 776 aa28.14■■■□□ 2.1
CHAF1A-205ENST00000587580 C16orf86Q6ZW13 317 aa28.14■■■□□ 2.1
CHAF1A-205ENST00000587580 FEZ1Q99689 392 aa28.14■■■□□ 2.1
CHAF1A-205ENST00000587580 ARHGAP39Q9C0H5 1083 aa28.14■■■□□ 2.1
CHAF1A-205ENST00000587580 ECM2O94769 699 aaPredicted RBP28.13■■■□□ 2.09
CHAF1A-205ENST00000587580 BCRP11274 1271 aa28.13■■■□□ 2.09
CHAF1A-205ENST00000587580 GUCY1A2P33402 732 aa28.13■■■□□ 2.09
CHAF1A-205ENST00000587580 SEPT2Q15019 361 aa28.13■■■□□ 2.09
CHAF1A-205ENST00000587580 SBK1Q52WX2 424 aa28.13■■■□□ 2.09
CHAF1A-205ENST00000587580 OSBPL3Q9H4L5 887 aa28.13■■■□□ 2.09
CHAF1A-205ENST00000587580 ZYXQ15942 572 aaKnown RBP28.12■■■□□ 2.09
CHAF1A-205ENST00000587580 USP17L2Q6R6M4 530 aa28.12■■■□□ 2.09
CHAF1A-205ENST00000587580 RILPL2Q969X0 211 aa28.12■■■□□ 2.09
CHAF1A-205ENST00000587580 PATL2C9JE40 543 aaKnown RBP28.11■■■□□ 2.09
CHAF1A-205ENST00000587580 AKR1B1P15121 316 aa28.11■■■□□ 2.09
CHAF1A-205ENST00000587580 OSBPP22059 807 aa28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms