RNA–Protein interactions for RNA: ENST00000587361.1

YIF1B-208, Transcript of Yip1 interacting factor homolog B, membrane trafficking protein, human

TSL 3

Gene YIF1B, Length 579 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
YIF1B-208	ENST00000587361	ZBTB21	Q9ULJ3	1066 aa		27.8	■■■□□ 2.04
YIF1B-208	ENST00000587361	DDX60L	Q5H9U9	1706 aa	Known RBP	27.79	■■■□□ 2.04
YIF1B-208	ENST00000587361	GDF11	O95390	407 aa		27.79	■■■□□ 2.04
YIF1B-208	ENST00000587361	ATP5J	P18859	108 aa		27.79	■■■□□ 2.04
YIF1B-208	ENST00000587361	BACE1	P56817	501 aa		27.79	■■■□□ 2.04
YIF1B-208	ENST00000587361	JAG1	P78504	1218 aa		27.79	■■■□□ 2.04
YIF1B-208	ENST00000587361	NAV1	Q8NEY1	1877 aa		27.78	■■■□□ 2.04
YIF1B-208	ENST00000587361	ZNF532	Q9HCE3	1301 aa		27.78	■■■□□ 2.04
YIF1B-208	ENST00000587361	MTMR2	Q13614	643 aa		27.78	■■■□□ 2.04
YIF1B-208	ENST00000587361	FAM110C	Q1W6H9	321 aa		27.78	■■■□□ 2.04
YIF1B-208	ENST00000587361	CRNKL1	Q9BZJ0	848 aa	Known RBP	27.78	■■■□□ 2.04
YIF1B-208	ENST00000587361	PAG1	Q9NWQ8	432 aa		27.78	■■■□□ 2.04
YIF1B-208	ENST00000587361	C19orf81	C9J6K1	198 aa		27.77	■■■□□ 2.04
YIF1B-208	ENST00000587361	EN2	P19622	333 aa	Predicted RBP	27.77	■■■□□ 2.04
YIF1B-208	ENST00000587361	GRK4	P32298	578 aa		27.77	■■■□□ 2.04
YIF1B-208	ENST00000587361	GCLC	P48506	637 aa	Predicted RBP	27.77	■■■□□ 2.04
YIF1B-208	ENST00000587361	TATDN1	Q6P1N9	297 aa		27.77	■■■□□ 2.04
YIF1B-208	ENST00000587361	ANKRD13C	Q8N6S4	541 aa		27.77	■■■□□ 2.04
YIF1B-208	ENST00000587361	BOLA2	Q9H3K6	86 aa		27.77	■■■□□ 2.04
YIF1B-208	ENST00000587361	TMOD4	Q9NZQ9	345 aa		27.77	■■■□□ 2.04
YIF1B-208	ENST00000587361	TCRBV5S4A2T	A0A5A2	114 aa		27.76	■■■□□ 2.03
YIF1B-208	ENST00000587361	USP17L10	C9JJH3	530 aa		27.76	■■■□□ 2.03
YIF1B-208	ENST00000587361	PRKCZ	Q05513	592 aa		27.76	■■■□□ 2.03
YIF1B-208	ENST00000587361	PRPF38B	Q5VTL8	546 aa	Known RBP	27.76	■■■□□ 2.03
YIF1B-208	ENST00000587361	EDC3	Q96F86	508 aa	Known RBP	27.76	■■■□□ 2.03
YIF1B-208	ENST00000587361	HAUS7	Q99871	368 aa		27.76	■■■□□ 2.03
YIF1B-208	ENST00000587361	ASCC2	Q9H1I8	757 aa	Predicted RBP	27.76	■■■□□ 2.03
YIF1B-208	ENST00000587361	BRCA2	P51587	3418 aa		27.75	■■■□□ 2.03
YIF1B-208	ENST00000587361	SHROOM1	Q2M3G4	852 aa	Predicted RBP	27.75	■■■□□ 2.03
YIF1B-208	ENST00000587361	MYH7	P12883	1935 aa		27.75	■■■□□ 2.03
YIF1B-208	ENST00000587361	TNPO2	O14787	897 aa	Known RBP	27.74	■■■□□ 2.03
YIF1B-208	ENST00000587361	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	27.74	■■■□□ 2.03	2e-8	■■■□□ 17.9
YIF1B-208	ENST00000587361	DOCK3	Q8IZD9	2030 aa		27.74	■■■□□ 2.03
YIF1B-208	ENST00000587361	MYC	P01106	439 aa	Predicted RBP	27.73	■■■□□ 2.03
YIF1B-208	ENST00000587361	GH2	P01242	217 aa		27.73	■■■□□ 2.03
YIF1B-208	ENST00000587361	HOXA7	P31268	230 aa	Predicted RBP	27.73	■■■□□ 2.03
YIF1B-208	ENST00000587361	SLAIN1	Q8ND83	568 aa		27.73	■■■□□ 2.03
YIF1B-208	ENST00000587361	GABRQ	Q9UN88	632 aa		27.73	■■■□□ 2.03
YIF1B-208	ENST00000587361	POLR3D	P05423	398 aa	Predicted RBP	27.72	■■■□□ 2.03
YIF1B-208	ENST00000587361	ADD2	P35612	726 aa		27.72	■■■□□ 2.03
YIF1B-208	ENST00000587361	PLCD1	P51178	756 aa		27.72	■■■□□ 2.03
YIF1B-208	ENST00000587361	IRX3	P78415	501 aa	Predicted RBP	27.72	■■■□□ 2.03
YIF1B-208	ENST00000587361	CERKL	Q49MI3	558 aa	Predicted RBP	27.72	■■■□□ 2.03
YIF1B-208	ENST00000587361	SMARCA5	O60264	1052 aa	Predicted RBP	27.71	■■■□□ 2.03
YIF1B-208	ENST00000587361	FLT3LG	P49771	235 aa		27.71	■■■□□ 2.03
YIF1B-208	ENST00000587361	LCORL	Q8N3X6	602 aa		27.71	■■■□□ 2.03
YIF1B-208	ENST00000587361	COA7	Q96BR5	231 aa		27.71	■■■□□ 2.03
YIF1B-208	ENST00000587361	DCTPP1	Q9H773	170 aa		27.71	■■■□□ 2.03
YIF1B-208	ENST00000587361	MCM9	Q9NXL9	1143 aa		27.71	■■■□□ 2.03
YIF1B-208	ENST00000587361	SHMT1	P34896	483 aa		27.7	■■■□□ 2.02
YIF1B-208	ENST00000587361	IRF5	Q13568	498 aa		27.7	■■■□□ 2.02
YIF1B-208	ENST00000587361	DCP1A	Q9NPI6	582 aa	Predicted RBP	27.7	■■■□□ 2.02
YIF1B-208	ENST00000587361	MKI67	P46013	3256 aa	Known RBP	27.69	■■■□□ 2.02
YIF1B-208	ENST00000587361	UBXN2A	P68543	259 aa		27.69	■■■□□ 2.02
YIF1B-208	ENST00000587361	GABPA	Q06546	454 aa		27.69	■■■□□ 2.02
YIF1B-208	ENST00000587361	MTFR1	Q15390	333 aa		27.69	■■■□□ 2.02
YIF1B-208	ENST00000587361	ABCB5	Q2M3G0	1257 aa		27.69	■■■□□ 2.02
YIF1B-208	ENST00000587361	USP17L2	Q6R6M4	530 aa		27.69	■■■□□ 2.02
YIF1B-208	ENST00000587361	SDR42E1	Q8WUS8	393 aa		27.69	■■■□□ 2.02
YIF1B-208	ENST00000587361	CABP5	Q9NP86	173 aa		27.69	■■■□□ 2.02
YIF1B-208	ENST00000587361	MORF4L1	Q9UBU8	362 aa		27.69	■■■□□ 2.02
YIF1B-208	ENST00000587361	BIN2	Q9UBW5	565 aa	Predicted RBP	27.69	■■■□□ 2.02
YIF1B-208	ENST00000587361	ADCY3	O60266	1144 aa		27.68	■■■□□ 2.02
YIF1B-208	ENST00000587361	UBE3C	Q15386	1083 aa		27.68	■■■□□ 2.02
YIF1B-208	ENST00000587361	PXYLP1	Q8TE99	480 aa		27.68	■■■□□ 2.02
YIF1B-208	ENST00000587361	FEZ1	Q99689	392 aa		27.68	■■■□□ 2.02
YIF1B-208	ENST00000587361	ARMT1	Q9H993	441 aa		27.68	■■■□□ 2.02
YIF1B-208	ENST00000587361	EMILIN3	Q9NT22	766 aa		27.68	■■■□□ 2.02
YIF1B-208	ENST00000587361	ECHDC1	Q9NTX5	307 aa		27.68	■■■□□ 2.02
YIF1B-208	ENST00000587361	TAOK2	Q9UL54	1235 aa		27.68	■■■□□ 2.02
YIF1B-208	ENST00000587361	MBD4	O95243	580 aa		27.67	■■■□□ 2.02
YIF1B-208	ENST00000587361	RAB3GAP1	Q15042	981 aa		27.67	■■■□□ 2.02
YIF1B-208	ENST00000587361	ZSCAN25	Q6NSZ9	544 aa		27.67	■■■□□ 2.02
YIF1B-208	ENST00000587361	NKX2-3	Q8TAU0	364 aa		27.67	■■■□□ 2.02
YIF1B-208	ENST00000587361	C12orf42	Q96LP6	360 aa		27.67	■■■□□ 2.02
YIF1B-208	ENST00000587361	ATP8A2	Q9NTI2	1148 aa		27.67	■■■□□ 2.02
YIF1B-208	ENST00000587361	HERVK_113	P62684	666 aa		27.66	■■■□□ 2.02
YIF1B-208	ENST00000587361	GPATCH3	Q96I76	525 aa		27.66	■■■□□ 2.02
YIF1B-208	ENST00000587361	P2RX7	Q99572	595 aa	Known RBP	27.66	■■■□□ 2.02
YIF1B-208	ENST00000587361	BAZ2A	Q9UIF9	1905 aa	Known RBP	27.65	■■■□□ 2.02
YIF1B-208	ENST00000587361	CCL5	P13501	91 aa		27.65	■■■□□ 2.02
YIF1B-208	ENST00000587361	USP14	P54578	494 aa		27.65	■■■□□ 2.02
YIF1B-208	ENST00000587361	SLFNL1	Q499Z3	407 aa		27.65	■■■□□ 2.02
YIF1B-208	ENST00000587361	GTF3C2	Q8WUA4	911 aa	Predicted RBP	27.65	■■■□□ 2.02
YIF1B-208	ENST00000587361	KIAA1683	Q9H0B3	1180 aa		27.65	■■■□□ 2.02
YIF1B-208	ENST00000587361	MYH8	P13535	1937 aa		27.65	■■■□□ 2.02
YIF1B-208	ENST00000587361	GJB1	P08034	283 aa		27.64	■■■□□ 2.02
YIF1B-208	ENST00000587361	RNF208	Q9H0X6	261 aa		27.64	■■■□□ 2.02
YIF1B-208	ENST00000587361	ELN	P15502	786 aa		27.63	■■■□□ 2.01
YIF1B-208	ENST00000587361	RRP1	P56182	461 aa	Known RBP	27.63	■■■□□ 2.01
YIF1B-208	ENST00000587361	SWAP70	Q9UH65	585 aa		27.63	■■■□□ 2.01
YIF1B-208	ENST00000587361	PRKAB2	O43741	272 aa		27.62	■■■□□ 2.01
YIF1B-208	ENST00000587361	GJA8	P48165	433 aa		27.62	■■■□□ 2.01
YIF1B-208	ENST00000587361	ZYX	Q15942	572 aa	Known RBP	27.62	■■■□□ 2.01
YIF1B-208	ENST00000587361	GPRC5A	Q8NFJ5	357 aa		27.62	■■■□□ 2.01
YIF1B-208	ENST00000587361	DDRGK1	Q96HY6	314 aa		27.62	■■■□□ 2.01
YIF1B-208	ENST00000587361	USP17L15	C9J2P7	530 aa		27.61	■■■□□ 2.01
YIF1B-208	ENST00000587361	USP17L13	C9JLJ4	530 aa		27.61	■■■□□ 2.01
YIF1B-208	ENST00000587361	USP17L11	C9JVI0	530 aa		27.61	■■■□□ 2.01
YIF1B-208	ENST00000587361	USP17L18	D6R9N7	530 aa		27.61	■■■□□ 2.01

Retrieved 100 of 20,778 RNA–protein pairs in 22 ms