RNA–Protein interactions for RNA: ENST00000587342.1

CXXC1-209, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-209ENST00000587342 PROCA1Q8NCQ7 364 aaPredicted RBP19.51■□□□□ 0.71
CXXC1-209ENST00000587342 WDR18Q9BV38 432 aa19.51■□□□□ 0.71
CXXC1-209ENST00000587342 ECHDC1Q9NTX5 307 aa19.51■□□□□ 0.71
CXXC1-209ENST00000587342 RBBP6Q7Z6E9 1792 aaKnown RBP19.51■□□□□ 0.71
CXXC1-209ENST00000587342 POTEFA5A3E0 1075 aa19.5■□□□□ 0.71
CXXC1-209ENST00000587342 SMIM22K7EJ46 135 aa19.5■□□□□ 0.71
CXXC1-209ENST00000587342 MBD4O95243 580 aa19.5■□□□□ 0.71
CXXC1-209ENST00000587342 ASNSP08243 561 aa19.5■□□□□ 0.71
CXXC1-209ENST00000587342 SHMT1P34896 483 aa19.5■□□□□ 0.71
CXXC1-209ENST00000587342 PSMC4P43686 418 aa19.5■□□□□ 0.71
CXXC1-209ENST00000587342 TRIM34Q9BYJ4 488 aa19.5■□□□□ 0.71
CXXC1-209ENST00000587342 CRNKL1Q9BZJ0 848 aaKnown RBP19.5■□□□□ 0.71
CXXC1-209ENST00000587342 DCP1AQ9NPI6 582 aaPredicted RBP19.5■□□□□ 0.71
CXXC1-209ENST00000587342 SERPINB13Q9UIV8 391 aa19.5■□□□□ 0.71
CXXC1-209ENST00000587342 MGAMO43451 1857 aa19.5■□□□□ 0.71
CXXC1-209ENST00000587342 GH2P01242 217 aa19.49■□□□□ 0.71
CXXC1-209ENST00000587342 OSBPP22059 807 aa19.49■□□□□ 0.71
CXXC1-209ENST00000587342 GABPAQ06546 454 aa19.49■□□□□ 0.71
CXXC1-209ENST00000587342 ZNF333Q96JL9 665 aa19.49■□□□□ 0.71
CXXC1-209ENST00000587342 TBC1D2Q9BYX2 928 aa19.49■□□□□ 0.71
CXXC1-209ENST00000587342 BACE1P56817 501 aa19.48■□□□□ 0.71
CXXC1-209ENST00000587342 KIF22Q14807 665 aa19.48■□□□□ 0.71
CXXC1-209ENST00000587342 BRCA2P51587 3418 aa19.48■□□□□ 0.71
CXXC1-209ENST00000587342 BAZ2AQ9UIF9 1905 aaKnown RBP19.47■□□□□ 0.71
CXXC1-209ENST00000587342 UBE3CQ15386 1083 aa19.47■□□□□ 0.71
CXXC1-209ENST00000587342 TTC6Q86TZ1 520 aa19.47■□□□□ 0.71
CXXC1-209ENST00000587342 SLC44A5Q8NCS7 719 aa19.47■□□□□ 0.71
CXXC1-209ENST00000587342 SMCR8Q8TEV9 937 aaPredicted RBP19.47■□□□□ 0.71
CXXC1-209ENST00000587342 SH3TC2Q8TF17 1288 aa19.47■□□□□ 0.71
CXXC1-209ENST00000587342 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.47■□□□□ 0.71
CXXC1-209ENST00000587342 PUS7LQ9H0K6 701 aaKnown RBP19.47■□□□□ 0.71
CXXC1-209ENST00000587342 ASCC2Q9H1I8 757 aaPredicted RBP19.47■□□□□ 0.71
CXXC1-209ENST00000587342 AS3MTQ9HBK9 375 aa19.47■□□□□ 0.71
CXXC1-209ENST00000587342 MCM9Q9NXL9 1143 aa19.47■□□□□ 0.71
CXXC1-209ENST00000587342 SRRDQ9UH36 339 aa19.47■□□□□ 0.71
CXXC1-209ENST00000587342 KIAA0100Q14667 2235 aaKnown RBP19.47■□□□□ 0.71
CXXC1-209ENST00000587342 CYP2D7A0A087X1C5 515 aa19.46■□□□□ 0.71
CXXC1-209ENST00000587342 GUCY1A2P33402 732 aa19.46■□□□□ 0.71
CXXC1-209ENST00000587342 PRKCZQ05513 592 aa19.46■□□□□ 0.71
CXXC1-209ENST00000587342 ARHGEF6Q15052 776 aa19.46■□□□□ 0.71
CXXC1-209ENST00000587342 SLC9C1Q4G0N8 1177 aa19.46■□□□□ 0.71
CXXC1-209ENST00000587342 ANKRD13CQ8N6S4 541 aa19.46■□□□□ 0.71
CXXC1-209ENST00000587342 GINM1Q9NU53 330 aa19.46■□□□□ 0.71
CXXC1-209ENST00000587342 PEX10O60683 326 aa19.45■□□□□ 0.7
CXXC1-209ENST00000587342 FMNL1O95466 1100 aaPredicted RBP19.45■□□□□ 0.7
CXXC1-209ENST00000587342 GNRH1P01148 92 aa19.45■□□□□ 0.7
CXXC1-209ENST00000587342 POLR3DP05423 398 aaPredicted RBP19.45■□□□□ 0.7
CXXC1-209ENST00000587342 POTEEQ6S8J3 1075 aa19.45■□□□□ 0.7
CXXC1-209ENST00000587342 PI4K2BQ8TCG2 481 aa19.45■□□□□ 0.7
CXXC1-209ENST00000587342 DYNLL2Q96FJ2 89 aa19.45■□□□□ 0.7
CXXC1-209ENST00000587342 EMILIN3Q9NT22 766 aa19.45■□□□□ 0.7
CXXC1-209ENST00000587342 GABRQQ9UN88 632 aa19.45■□□□□ 0.7
CXXC1-209ENST00000587342 MYPNQ86TC9 1320 aa19.45■□□□□ 0.7
CXXC1-209ENST00000587342 SALL3Q9BXA9 1300 aa19.45■□□□□ 0.7
CXXC1-209ENST00000587342 PDE4DIPQ5VU43 2346 aa19.44■□□□□ 0.7
CXXC1-209ENST00000587342 MYCP01106 439 aaPredicted RBP19.44■□□□□ 0.7
CXXC1-209ENST00000587342 FCGRTP55899 365 aa19.44■□□□□ 0.7
CXXC1-209ENST00000587342 CERKLQ49MI3 558 aaPredicted RBP19.44■□□□□ 0.7
CXXC1-209ENST00000587342 KBTBD3Q8NAB2 608 aa19.44■□□□□ 0.7
CXXC1-209ENST00000587342 ACER1Q8TDN7 264 aa19.44■□□□□ 0.7
CXXC1-209ENST00000587342 PNMA3Q9UL41 463 aa19.44■□□□□ 0.7
CXXC1-209ENST00000587342 USP17L10C9JJH3 530 aa19.43■□□□□ 0.7
CXXC1-209ENST00000587342 FAM110CQ1W6H9 321 aa19.43■□□□□ 0.7
CXXC1-209ENST00000587342 ABCB5Q2M3G0 1257 aa19.43■□□□□ 0.7
CXXC1-209ENST00000587342 C19orf81C9J6K1 198 aa19.42■□□□□ 0.7
CXXC1-209ENST00000587342 HOXA7P31268 230 aaPredicted RBP19.42■□□□□ 0.7
CXXC1-209ENST00000587342 PRMT2P55345 433 aa19.42■□□□□ 0.7
CXXC1-209ENST00000587342 RAB3GAP1Q15042 981 aa19.42■□□□□ 0.7
CXXC1-209ENST00000587342 ZYXQ15942 572 aaKnown RBP19.42■□□□□ 0.7
CXXC1-209ENST00000587342 OSBP2Q969R2 916 aa19.42■□□□□ 0.7
CXXC1-209ENST00000587342 GPATCH3Q96I76 525 aa19.42■□□□□ 0.7
CXXC1-209ENST00000587342 TXNRD2Q9NNW7 524 aa19.42■□□□□ 0.7
CXXC1-209ENST00000587342 TMOD4Q9NZQ9 345 aa19.42■□□□□ 0.7
CXXC1-209ENST00000587342 EN2P19622 333 aaPredicted RBP19.41■□□□□ 0.7
CXXC1-209ENST00000587342 SEPT2Q15019 361 aa19.41■□□□□ 0.7
CXXC1-209ENST00000587342 CLEC10AQ8IUN9 316 aa19.41■□□□□ 0.7
CXXC1-209ENST00000587342 P2RX7Q99572 595 aaKnown RBP19.41■□□□□ 0.7
CXXC1-209ENST00000587342 ATP8A2Q9NTI2 1148 aa19.41■□□□□ 0.7
CXXC1-209ENST00000587342 SLC4A4Q9Y6R1 1079 aa19.41■□□□□ 0.7
CXXC1-209ENST00000587342 TTC41PQ6P2S7 1318 aa19.41■□□□□ 0.7
CXXC1-209ENST00000587342 USP17L12C9JPN9 530 aa19.4■□□□□ 0.7
CXXC1-209ENST00000587342 USP17L21D6R901 530 aa19.4■□□□□ 0.7
CXXC1-209ENST00000587342 M0R2C6 588 aa19.4■□□□□ 0.7
CXXC1-209ENST00000587342 GCLCP48506 637 aaPredicted RBP19.4■□□□□ 0.7
CXXC1-209ENST00000587342 PABPC4Q13310 644 aaKnown RBP eCLIP19.4■□□□□ 0.7
CXXC1-209ENST00000587342 HDAC1Q13547 482 aaPredicted RBP19.4■□□□□ 0.7
CXXC1-209ENST00000587342 MTFR1Q15390 333 aa19.4■□□□□ 0.7
CXXC1-209ENST00000587342 C12orf60Q5U649 245 aa19.4■□□□□ 0.7
CXXC1-209ENST00000587342 ZSCAN25Q6NSZ9 544 aa19.4■□□□□ 0.7
CXXC1-209ENST00000587342 USP17L2Q6R6M4 530 aa19.4■□□□□ 0.7
CXXC1-209ENST00000587342 C12orf42Q96LP6 360 aa19.4■□□□□ 0.7
CXXC1-209ENST00000587342 STRBPQ96SI9 672 aaKnown RBP19.4■□□□□ 0.7
CXXC1-209ENST00000587342 KIAA1683Q9H0B3 1180 aa19.4■□□□□ 0.7
CXXC1-209ENST00000587342 MORF4L1Q9UBU8 362 aa19.4■□□□□ 0.7
CXXC1-209ENST00000587342 PLXNB2O15031 1838 aa19.39■□□□□ 0.7
CXXC1-209ENST00000587342 DOCK3Q8IZD9 2030 aa19.39■□□□□ 0.69
CXXC1-209ENST00000587342 A0A1W2PRG0 241 aa19.39■□□□□ 0.69
CXXC1-209ENST00000587342 TNPO2O14787 897 aaKnown RBP19.39■□□□□ 0.69
CXXC1-209ENST00000587342 RNF113AO15541 343 aaKnown RBP19.39■□□□□ 0.69
CXXC1-209ENST00000587342 AKR1B1P15121 316 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms