RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 SPP2Q13103 211 aa17.81■□□□□ 0.44
ATG4D-207ENST00000587256 MOGSQ13724 837 aa17.81■□□□□ 0.44
ATG4D-207ENST00000587256 ZNF280CQ8ND82 737 aa17.81■□□□□ 0.44
ATG4D-207ENST00000587256 PARK7Q99497 189 aaKnown RBP17.81■□□□□ 0.44
ATG4D-207ENST00000587256 GINM1Q9NU53 330 aa17.81■□□□□ 0.44
ATG4D-207ENST00000587256 PTPRFP10586 1907 aa17.8■□□□□ 0.44
ATG4D-207ENST00000587256 SHROOM1Q2M3G4 852 aaPredicted RBP17.8■□□□□ 0.44
ATG4D-207ENST00000587256 OSBP2Q969R2 916 aa17.8■□□□□ 0.44
ATG4D-207ENST00000587256 ERO1AQ96HE7 468 aa17.8■□□□□ 0.44
ATG4D-207ENST00000587256 ABHD8Q96I13 439 aa17.8■□□□□ 0.44
ATG4D-207ENST00000587256 BAZ2AQ9UIF9 1905 aaKnown RBP17.79■□□□□ 0.44
ATG4D-207ENST00000587256 M0R2C6 588 aa17.79■□□□□ 0.44
ATG4D-207ENST00000587256 GPAA1O43292 621 aa17.79■□□□□ 0.44
ATG4D-207ENST00000587256 GH2P01242 217 aa17.79■□□□□ 0.44
ATG4D-207ENST00000587256 SHMT1P34896 483 aa17.79■□□□□ 0.44
ATG4D-207ENST00000587256 HMGCS2P54868 508 aa17.79■□□□□ 0.44
ATG4D-207ENST00000587256 JAG1P78504 1218 aa17.79■□□□□ 0.44
ATG4D-207ENST00000587256 SP3Q02447 781 aa17.79■□□□□ 0.44
ATG4D-207ENST00000587256 EVX2Q03828 476 aa17.79■□□□□ 0.44
ATG4D-207ENST00000587256 CERKLQ49MI3 558 aaPredicted RBP17.79■□□□□ 0.44
ATG4D-207ENST00000587256 TATDN1Q6P1N9 297 aa17.79■□□□□ 0.44
ATG4D-207ENST00000587256 EVI5LQ96CN4 794 aa17.79■□□□□ 0.44
ATG4D-207ENST00000587256 STRBPQ96SI9 672 aaKnown RBP17.79■□□□□ 0.44
ATG4D-207ENST00000587256 TLR2O60603 784 aa17.78■□□□□ 0.44
ATG4D-207ENST00000587256 MTMR2Q13614 643 aa17.78■□□□□ 0.44
ATG4D-207ENST00000587256 ABCB5Q2M3G0 1257 aa17.78■□□□□ 0.44
ATG4D-207ENST00000587256 GPAT2Q6NUI2 795 aa17.78■□□□□ 0.44
ATG4D-207ENST00000587256 CD99L2Q8TCZ2 262 aa17.78■□□□□ 0.44
ATG4D-207ENST00000587256 CABP5Q9NP86 173 aa17.78■□□□□ 0.44
ATG4D-207ENST00000587256 ARPP21Q9UBL0 812 aaPredicted RBP17.78■□□□□ 0.44
ATG4D-207ENST00000587256 AGTPBP1Q9UPW5 1226 aa17.78■□□□□ 0.44
ATG4D-207ENST00000587256 LOC285556D6RIA3 1793 aa17.78■□□□□ 0.44
ATG4D-207ENST00000587256 CYP2D7A0A087X1C5 515 aa17.77■□□□□ 0.44
ATG4D-207ENST00000587256 TRIM6-TRIM34B2RNG4 842 aa17.77■□□□□ 0.44
ATG4D-207ENST00000587256 USP17L12C9JPN9 530 aa17.77■□□□□ 0.44
ATG4D-207ENST00000587256 USP17L21D6R901 530 aa17.77■□□□□ 0.44
ATG4D-207ENST00000587256 MPHOSPH10O00566 681 aaKnown RBP17.77■□□□□ 0.44
ATG4D-207ENST00000587256 GNAT2P19087 354 aa17.77■□□□□ 0.44
ATG4D-207ENST00000587256 GABPAQ06546 454 aa17.77■□□□□ 0.44
ATG4D-207ENST00000587256 RAB3GAP1Q15042 981 aa17.77■□□□□ 0.44
ATG4D-207ENST00000587256 PROCA1Q8NCQ7 364 aaPredicted RBP17.77■□□□□ 0.44
ATG4D-207ENST00000587256 SLC44A5Q8NCS7 719 aa17.77■□□□□ 0.44
ATG4D-207ENST00000587256 DYNLL2Q96FJ2 89 aa17.77■□□□□ 0.44
ATG4D-207ENST00000587256 FEZ1Q99689 392 aa17.77■□□□□ 0.44
ATG4D-207ENST00000587256 WDR18Q9BV38 432 aa17.77■□□□□ 0.44
ATG4D-207ENST00000587256 SWAP70Q9UH65 585 aa17.77■□□□□ 0.44
ATG4D-207ENST00000587256 APPP05067 770 aa17.76■□□□□ 0.43
ATG4D-207ENST00000587256 CYP2C8P10632 490 aa17.76■□□□□ 0.43
ATG4D-207ENST00000587256 TDO2P48775 406 aa17.76■□□□□ 0.43
ATG4D-207ENST00000587256 ZMYM1Q5SVZ6 1142 aa17.76■□□□□ 0.43
ATG4D-207ENST00000587256 TREML2Q5T2D2 321 aa17.76■□□□□ 0.43
ATG4D-207ENST00000587256 C12orf60Q5U649 245 aa17.76■□□□□ 0.43
ATG4D-207ENST00000587256 SMCR8Q8TEV9 937 aaPredicted RBP17.76■□□□□ 0.43
ATG4D-207ENST00000587256 SEC62Q99442 399 aaKnown RBP17.76■□□□□ 0.43
ATG4D-207ENST00000587256 TMOD4Q9NZQ9 345 aa17.76■□□□□ 0.43
ATG4D-207ENST00000587256 CPA4Q9UI42 421 aa17.76■□□□□ 0.43
ATG4D-207ENST00000587256 PNMA3Q9UL41 463 aa17.76■□□□□ 0.43
ATG4D-207ENST00000587256 TAOK2Q9UL54 1235 aa17.76■□□□□ 0.43
ATG4D-207ENST00000587256 SLC45A1Q9Y2W3 748 aa17.76■□□□□ 0.43
ATG4D-207ENST00000587256 TRIM17Q9Y577 477 aa17.76■□□□□ 0.43
ATG4D-207ENST00000587256 MYH8P13535 1937 aa17.75■□□□□ 0.43
ATG4D-207ENST00000587256 GSG1L2A8MUP6 293 aa17.75■□□□□ 0.43
ATG4D-207ENST00000587256 BACE1P56817 501 aa17.75■□□□□ 0.43
ATG4D-207ENST00000587256 PABPC4Q13310 644 aaKnown RBP eCLIP17.75■□□□□ 0.43
ATG4D-207ENST00000587256 PKN2Q16513 984 aaKnown RBP17.75■□□□□ 0.43
ATG4D-207ENST00000587256 CTR9Q6PD62 1173 aa17.75■□□□□ 0.43
ATG4D-207ENST00000587256 PLEKHM2Q8IWE5 1019 aa17.75■□□□□ 0.43
ATG4D-207ENST00000587256 RILPL2Q969X0 211 aa17.75■□□□□ 0.43
ATG4D-207ENST00000587256 ADGRA2Q96PE1 1338 aa17.74■□□□□ 0.43
ATG4D-207ENST00000587256 USP17L10C9JJH3 530 aa17.74■□□□□ 0.43
ATG4D-207ENST00000587256 KIF22Q14807 665 aa17.74■□□□□ 0.43
ATG4D-207ENST00000587256 SH3D19Q5HYK7 790 aa17.74■□□□□ 0.43
ATG4D-207ENST00000587256 GIMAP6Q6P9H5 292 aa17.74■□□□□ 0.43
ATG4D-207ENST00000587256 OTOP1Q7RTM1 612 aa17.74■□□□□ 0.43
ATG4D-207ENST00000587256 NACAP1Q9BZK3 213 aa17.74■□□□□ 0.43
ATG4D-207ENST00000587256 EFCC1Q9HA90 598 aa17.74■□□□□ 0.43
ATG4D-207ENST00000587256 EPB41L4AQ9HCS5 686 aaPredicted RBP17.74■□□□□ 0.43
ATG4D-207ENST00000587256 C19orf81C9J6K1 198 aa17.73■□□□□ 0.43
ATG4D-207ENST00000587256 SEPT2Q15019 361 aa17.73■□□□□ 0.43
ATG4D-207ENST00000587256 ARHGEF6Q15052 776 aa17.73■□□□□ 0.43
ATG4D-207ENST00000587256 ZYXQ15942 572 aaKnown RBP17.73■□□□□ 0.43
ATG4D-207ENST00000587256 C17orf99Q6UX52 265 aa17.73■□□□□ 0.43
ATG4D-207ENST00000587256 C16orf86Q6ZW13 317 aa17.73■□□□□ 0.43
ATG4D-207ENST00000587256 OSBPL3Q9H4L5 887 aa17.73■□□□□ 0.43
ATG4D-207ENST00000587256 CCDC85CA6NKD9 419 aa17.72■□□□□ 0.43
ATG4D-207ENST00000587256 MINDY4BA8MYZ0 360 aa17.72■□□□□ 0.43
ATG4D-207ENST00000587256 SMIM22K7EJ46 135 aa17.72■□□□□ 0.43
ATG4D-207ENST00000587256 ECM2O94769 699 aaPredicted RBP17.72■□□□□ 0.43
ATG4D-207ENST00000587256 CDK8P49336 464 aa17.72■□□□□ 0.43
ATG4D-207ENST00000587256 LACTBP83111 547 aaPredicted RBP17.72■□□□□ 0.43
ATG4D-207ENST00000587256 SBK1Q52WX2 424 aa17.72■□□□□ 0.43
ATG4D-207ENST00000587256 FBXO46Q6PJ61 603 aaPredicted RBP17.72■□□□□ 0.43
ATG4D-207ENST00000587256 CCDC129Q6ZRS4 1044 aa17.72■□□□□ 0.43
ATG4D-207ENST00000587256 TMEM179Q6ZVK1 233 aa17.72■□□□□ 0.43
ATG4D-207ENST00000587256 NAPBQ9H115 298 aa17.72■□□□□ 0.43
ATG4D-207ENST00000587256 ROBO3Q96MS0 1386 aa17.71■□□□□ 0.43
ATG4D-207ENST00000587256 PATL2C9JE40 543 aaKnown RBP17.71■□□□□ 0.43
ATG4D-207ENST00000587256 AKR1B1P15121 316 aa17.71■□□□□ 0.43
ATG4D-207ENST00000587256 OSBPP22059 807 aa17.71■□□□□ 0.43
ATG4D-207ENST00000587256 USP14P54578 494 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms