RNA–Protein interactions for RNA: ENST00000586985.1

SMARCA4-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-212ENST00000586985 GABPAQ06546 454 aa17.37■□□□□ 0.37
SMARCA4-212ENST00000586985 ABCB5Q2M3G0 1257 aa17.37■□□□□ 0.37
SMARCA4-212ENST00000586985 MCMDC2Q4G0Z9 681 aa17.37■□□□□ 0.37
SMARCA4-212ENST00000586985 ANKRD23Q86SG2 305 aa17.37■□□□□ 0.37
SMARCA4-212ENST00000586985 IFNL3Q8IZI9 196 aa17.37■□□□□ 0.37
SMARCA4-212ENST00000586985 FAM43AQ8N2R8 423 aa17.37■□□□□ 0.37
SMARCA4-212ENST00000586985 DYNLL2Q96FJ2 89 aa17.37■□□□□ 0.37
SMARCA4-212ENST00000586985 CCDC136Q96JN2 1154 aa17.37■□□□□ 0.37
SMARCA4-212ENST00000586985 CFHR5Q9BXR6 569 aa17.37■□□□□ 0.37
SMARCA4-212ENST00000586985 ZCCHC17Q9NP64 241 aaKnown RBP17.37■□□□□ 0.37
SMARCA4-212ENST00000586985 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.37■□□□□ 0.37
SMARCA4-212ENST00000586985 ZBTB21Q9ULJ3 1066 aa17.37■□□□□ 0.37
SMARCA4-212ENST00000586985 CYP2D7A0A087X1C5 515 aa17.36■□□□□ 0.37
SMARCA4-212ENST00000586985 BTBD19C9JJ37 291 aa17.36■□□□□ 0.37
SMARCA4-212ENST00000586985 GPR25O00155 361 aa17.36■□□□□ 0.37
SMARCA4-212ENST00000586985 HIP1O00291 1037 aa17.36■□□□□ 0.37
SMARCA4-212ENST00000586985 GH2P01242 217 aa17.36■□□□□ 0.37
SMARCA4-212ENST00000586985 SHMT1P34896 483 aa17.36■□□□□ 0.37
SMARCA4-212ENST00000586985 JAG1P78504 1218 aa17.36■□□□□ 0.37
SMARCA4-212ENST00000586985 TAF1CQ15572 869 aaPredicted RBP17.36■□□□□ 0.37
SMARCA4-212ENST00000586985 SBK1Q52WX2 424 aa17.36■□□□□ 0.37
SMARCA4-212ENST00000586985 GADL1Q6ZQY3 521 aa17.36■□□□□ 0.37
SMARCA4-212ENST00000586985 WDR18Q9BV38 432 aa17.36■□□□□ 0.37
SMARCA4-212ENST00000586985 A0A0G2JLL6 359 aaPredicted RBP17.35■□□□□ 0.37
SMARCA4-212ENST00000586985 MPHOSPH10O00566 681 aaKnown RBP17.35■□□□□ 0.37
SMARCA4-212ENST00000586985 CDK8P49336 464 aa17.35■□□□□ 0.37
SMARCA4-212ENST00000586985 EVX2Q03828 476 aa17.35■□□□□ 0.37
SMARCA4-212ENST00000586985 NMIQ13287 307 aaPredicted RBP17.35■□□□□ 0.37
SMARCA4-212ENST00000586985 CRHR2Q13324 411 aa17.35■□□□□ 0.37
SMARCA4-212ENST00000586985 RAB3GAP1Q15042 981 aa17.35■□□□□ 0.37
SMARCA4-212ENST00000586985 NOM1Q5C9Z4 860 aaKnown RBP17.35■□□□□ 0.37
SMARCA4-212ENST00000586985 TTC22Q5TAA0 569 aa17.35■□□□□ 0.37
SMARCA4-212ENST00000586985 PRRT2Q7Z6L0 340 aaPredicted RBP17.35■□□□□ 0.37
SMARCA4-212ENST00000586985 R3HDMLQ9H3Y0 253 aa17.35■□□□□ 0.37
SMARCA4-212ENST00000586985 DIAPH3Q9NSV4 1193 aa17.35■□□□□ 0.37
SMARCA4-212ENST00000586985 CEP350Q5VT06 3117 aa17.35■□□□□ 0.37
SMARCA4-212ENST00000586985 PDHXO00330 501 aa17.34■□□□□ 0.37
SMARCA4-212ENST00000586985 FKTNO75072 461 aa17.34■□□□□ 0.37
SMARCA4-212ENST00000586985 CCDC129Q6ZRS4 1044 aa17.34■□□□□ 0.37
SMARCA4-212ENST00000586985 CCDC17Q96LX7 622 aa17.34■□□□□ 0.37
SMARCA4-212ENST00000586985 FAM227BQ96M60 508 aa17.34■□□□□ 0.37
SMARCA4-212ENST00000586985 NAPBQ9H115 298 aa17.34■□□□□ 0.37
SMARCA4-212ENST00000586985 C19orf81C9J6K1 198 aa17.33■□□□□ 0.36
SMARCA4-212ENST00000586985 USP17L10C9JJH3 530 aa17.33■□□□□ 0.36
SMARCA4-212ENST00000586985 SLC3A2P08195 630 aaKnown RBP17.33■□□□□ 0.36
SMARCA4-212ENST00000586985 MFAP1P55081 439 aaKnown RBP17.33■□□□□ 0.36
SMARCA4-212ENST00000586985 MOGSQ13724 837 aa17.33■□□□□ 0.36
SMARCA4-212ENST00000586985 GPAT2Q6NUI2 795 aa17.33■□□□□ 0.36
SMARCA4-212ENST00000586985 C16orf86Q6ZW13 317 aa17.33■□□□□ 0.36
SMARCA4-212ENST00000586985 SLC44A5Q8NCS7 719 aa17.33■□□□□ 0.36
SMARCA4-212ENST00000586985 ZNF296Q8WUU4 475 aaPredicted RBP17.33■□□□□ 0.36
SMARCA4-212ENST00000586985 MKNK2Q9HBH9 465 aa17.33■□□□□ 0.36
SMARCA4-212ENST00000586985 ZNF287Q9HBT7 754 aa17.33■□□□□ 0.36
SMARCA4-212ENST00000586985 TMOD4Q9NZQ9 345 aa17.33■□□□□ 0.36
SMARCA4-212ENST00000586985 A0A0D9SFI3 127 aa17.32■□□□□ 0.36
SMARCA4-212ENST00000586985 HMGCS2P54868 508 aa17.32■□□□□ 0.36
SMARCA4-212ENST00000586985 BACE1P56817 501 aa17.32■□□□□ 0.36
SMARCA4-212ENST00000586985 PABPC4Q13310 644 aaKnown RBP eCLIP17.32■□□□□ 0.363e-7■■■□□ 14.6
SMARCA4-212ENST00000586985 SHROOM1Q2M3G4 852 aaPredicted RBP17.32■□□□□ 0.36
SMARCA4-212ENST00000586985 SH3D19Q5HYK7 790 aa17.32■□□□□ 0.36
SMARCA4-212ENST00000586985 CWC27Q6UX04 472 aaKnown RBP17.32■□□□□ 0.36
SMARCA4-212ENST00000586985 TNS4Q8IZW8 715 aa17.32■□□□□ 0.36
SMARCA4-212ENST00000586985 STK11IPQ8N1F8 1099 aa17.32■□□□□ 0.36
SMARCA4-212ENST00000586985 EPB41L4AQ9HCS5 686 aaPredicted RBP17.32■□□□□ 0.36
SMARCA4-212ENST00000586985 OTOFQ9HC10 1997 aa17.31■□□□□ 0.36
SMARCA4-212ENST00000586985 SMIM22K7EJ46 135 aa17.31■□□□□ 0.36
SMARCA4-212ENST00000586985 MTMR2Q13614 643 aa17.31■□□□□ 0.36
SMARCA4-212ENST00000586985 TMEM179Q6ZVK1 233 aa17.31■□□□□ 0.36
SMARCA4-212ENST00000586985 ZNF444Q8N0Y2 327 aaPredicted RBP17.31■□□□□ 0.36
SMARCA4-212ENST00000586985 PROCA1Q8NCQ7 364 aaPredicted RBP17.31■□□□□ 0.36
SMARCA4-212ENST00000586985 SLC45A1Q9Y2W3 748 aa17.31■□□□□ 0.36
SMARCA4-212ENST00000586985 TLR2O60603 784 aa17.3■□□□□ 0.36
SMARCA4-212ENST00000586985 AKR1B1P15121 316 aa17.3■□□□□ 0.36
SMARCA4-212ENST00000586985 GSPT1P15170 499 aaKnown RBP17.3■□□□□ 0.36
SMARCA4-212ENST00000586985 SP3Q02447 781 aa17.3■□□□□ 0.36
SMARCA4-212ENST00000586985 SEPT2Q15019 361 aa17.3■□□□□ 0.36
SMARCA4-212ENST00000586985 USP17L2Q6R6M4 530 aa17.3■□□□□ 0.36
SMARCA4-212ENST00000586985 PARK7Q99497 189 aaKnown RBP17.3■□□□□ 0.36
SMARCA4-212ENST00000586985 FEZ1Q99689 392 aa17.3■□□□□ 0.36
SMARCA4-212ENST00000586985 AGTPBP1Q9UPW5 1226 aa17.3■□□□□ 0.36
SMARCA4-212ENST00000586985 CCDC171Q6TFL3 1326 aa17.29■□□□□ 0.36
SMARCA4-212ENST00000586985 OSBPP22059 807 aa17.29■□□□□ 0.36
SMARCA4-212ENST00000586985 USP14P54578 494 aa17.29■□□□□ 0.36
SMARCA4-212ENST00000586985 PDE4BQ07343 736 aa17.29■□□□□ 0.36
SMARCA4-212ENST00000586985 PPARAQ07869 468 aa17.29■□□□□ 0.36
SMARCA4-212ENST00000586985 ARHGEF6Q15052 776 aa17.29■□□□□ 0.36
SMARCA4-212ENST00000586985 ALX1Q15699 326 aa17.29■□□□□ 0.36
SMARCA4-212ENST00000586985 VPS53Q5VIR6 699 aa17.29■□□□□ 0.36
SMARCA4-212ENST00000586985 ERICH6BQ5W0A0 696 aa17.29■□□□□ 0.36
SMARCA4-212ENST00000586985 ERO1AQ96HE7 468 aa17.29■□□□□ 0.36
SMARCA4-212ENST00000586985 FOCADQ5VW36 1801 aa17.28■□□□□ 0.36
SMARCA4-212ENST00000586985 FGAP02671 866 aa17.28■□□□□ 0.36
SMARCA4-212ENST00000586985 CYP2C8P10632 490 aa17.28■□□□□ 0.36
SMARCA4-212ENST00000586985 HSPD1P10809 573 aaKnown RBP17.28■□□□□ 0.36
SMARCA4-212ENST00000586985 GUCY1A2P33402 732 aa17.28■□□□□ 0.36
SMARCA4-212ENST00000586985 DGKZQ13574 1117 aa17.28■□□□□ 0.36
SMARCA4-212ENST00000586985 TREML2Q5T2D2 321 aa17.28■□□□□ 0.36
SMARCA4-212ENST00000586985 RUFY2Q8WXA3 655 aa17.28■□□□□ 0.36
SMARCA4-212ENST00000586985 PNMA3Q9UL41 463 aa17.28■□□□□ 0.36
SMARCA4-212ENST00000586985 KIF22Q14807 665 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms