RNA–Protein interactions for RNA: ENST00000586863.5

ATG4D-206, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 4

Gene ATG4D, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-206ENST00000586863 MIGA1Q8NAN2 632 aa17.11■□□□□ 0.33
ATG4D-206ENST00000586863 PXYLP1Q8TE99 480 aa17.11■□□□□ 0.33
ATG4D-206ENST00000586863 WDR18Q9BV38 432 aa17.11■□□□□ 0.33
ATG4D-206ENST00000586863 TAOK2Q9UL54 1235 aa17.11■□□□□ 0.33
ATG4D-206ENST00000586863 IGSF3O75054 1194 aa17.1■□□□□ 0.33
ATG4D-206ENST00000586863 BACE1P56817 501 aa17.1■□□□□ 0.33
ATG4D-206ENST00000586863 FOXP4Q8IVH2 680 aaPredicted RBP17.1■□□□□ 0.33
ATG4D-206ENST00000586863 MAGEB6Q8N7X4 407 aa17.1■□□□□ 0.33
ATG4D-206ENST00000586863 COA7Q96BR5 231 aa17.1■□□□□ 0.33
ATG4D-206ENST00000586863 ANTXR1Q9H6X2 564 aa17.1■□□□□ 0.33
ATG4D-206ENST00000586863 ZBTB21Q9ULJ3 1066 aa17.1■□□□□ 0.33
ATG4D-206ENST00000586863 COLQQ9Y215 455 aaPredicted RBP17.1■□□□□ 0.33
ATG4D-206ENST00000586863 DDX60LQ5H9U9 1706 aaKnown RBP17.1■□□□□ 0.33
ATG4D-206ENST00000586863 AACSQ86V21 672 aa17.09■□□□□ 0.33
ATG4D-206ENST00000586863 TRIM34Q9BYJ4 488 aa17.09■□□□□ 0.33
ATG4D-206ENST00000586863 NAV1Q8NEY1 1877 aa17.09■□□□□ 0.33
ATG4D-206ENST00000586863 ALPK3Q96L96 1907 aa17.08■□□□□ 0.33
ATG4D-206ENST00000586863 PEX10O60683 326 aa17.08■□□□□ 0.32
ATG4D-206ENST00000586863 FARP2O94887 1054 aaPredicted RBP17.08■□□□□ 0.32
ATG4D-206ENST00000586863 SGPL1O95470 568 aa17.08■□□□□ 0.32
ATG4D-206ENST00000586863 HLA-DOAP06340 250 aa17.08■□□□□ 0.32
ATG4D-206ENST00000586863 FXR1P51114 621 aaKnown RBP eCLIP17.08■□□□□ 0.32
ATG4D-206ENST00000586863 ERC1Q8IUD2 1116 aa17.08■□□□□ 0.32
ATG4D-206ENST00000586863 DPF3Q92784 378 aa17.08■□□□□ 0.32
ATG4D-206ENST00000586863 DEFB118Q96PH6 123 aa17.08■□□□□ 0.32
ATG4D-206ENST00000586863 PAK6Q9NQU5 681 aaPredicted RBP17.08■□□□□ 0.32
ATG4D-206ENST00000586863 TMOD4Q9NZQ9 345 aa17.08■□□□□ 0.32
ATG4D-206ENST00000586863 MORF4L1Q9UBU8 362 aa17.08■□□□□ 0.32
ATG4D-206ENST00000586863 IRX3P78415 501 aaPredicted RBP17.07■□□□□ 0.32
ATG4D-206ENST00000586863 P2RX7Q99572 595 aaKnown RBP17.07■□□□□ 0.32
ATG4D-206ENST00000586863 IL1RAPL2Q9NP60 686 aa17.07■□□□□ 0.32
ATG4D-206ENST00000586863 GINM1Q9NU53 330 aa17.07■□□□□ 0.32
ATG4D-206ENST00000586863 GJD2Q9UKL4 321 aa17.07■□□□□ 0.32
ATG4D-206ENST00000586863 USP17L10C9JJH3 530 aa17.06■□□□□ 0.32
ATG4D-206ENST00000586863 HOXA7P31268 230 aaPredicted RBP17.06■□□□□ 0.32
ATG4D-206ENST00000586863 USP5P45974 858 aa17.06■□□□□ 0.32
ATG4D-206ENST00000586863 MAP3K12Q12852 859 aa17.06■□□□□ 0.32
ATG4D-206ENST00000586863 TXNRD2Q9NNW7 524 aa17.06■□□□□ 0.32
ATG4D-206ENST00000586863 C19orf81C9J6K1 198 aa17.05■□□□□ 0.32
ATG4D-206ENST00000586863 GH2P01242 217 aa17.05■□□□□ 0.32
ATG4D-206ENST00000586863 HMGCRP04035 888 aa17.05■□□□□ 0.32
ATG4D-206ENST00000586863 HERVK_113P62684 666 aa17.05■□□□□ 0.32
ATG4D-206ENST00000586863 CHRDL2Q6WN34 429 aa17.05■□□□□ 0.32
ATG4D-206ENST00000586863 CERS3Q8IU89 383 aa17.05■□□□□ 0.32
ATG4D-206ENST00000586863 RHPN1Q8TCX5 695 aa17.05■□□□□ 0.32
ATG4D-206ENST00000586863 HTATIP2Q9BUP3 242 aa17.05■□□□□ 0.32
ATG4D-206ENST00000586863 EMILIN3Q9NT22 766 aa17.05■□□□□ 0.32
ATG4D-206ENST00000586863 TRIM32Q13049 653 aa17.04■□□□□ 0.32
ATG4D-206ENST00000586863 TATDN1Q6P1N9 297 aa17.04■□□□□ 0.32
ATG4D-206ENST00000586863 RIOK1Q9BRS2 568 aaKnown RBP17.04■□□□□ 0.32
ATG4D-206ENST00000586863 CRISPLD2Q9H0B8 497 aa17.04■□□□□ 0.32
ATG4D-206ENST00000586863 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.04■□□□□ 0.32
ATG4D-206ENST00000586863 EHD4Q9H223 541 aa17.04■□□□□ 0.32
ATG4D-206ENST00000586863 SERPINB13Q9UIV8 391 aa17.04■□□□□ 0.32
ATG4D-206ENST00000586863 APBB1O00213 710 aa17.03■□□□□ 0.32
ATG4D-206ENST00000586863 TFRCP02786 760 aaKnown RBP17.03■□□□□ 0.32
ATG4D-206ENST00000586863 HSP90AB4PQ58FF6 505 aa17.03■□□□□ 0.32
ATG4D-206ENST00000586863 POTEEQ6S8J3 1075 aa17.03■□□□□ 0.32
ATG4D-206ENST00000586863 SIRT2Q8IXJ6 389 aa17.03■□□□□ 0.32
ATG4D-206ENST00000586863 PDE6AP16499 860 aa17.02■□□□□ 0.32
ATG4D-206ENST00000586863 PLCD1P51178 756 aa17.02■□□□□ 0.32
ATG4D-206ENST00000586863 ZYXQ15942 572 aaKnown RBP17.02■□□□□ 0.32
ATG4D-206ENST00000586863 TMED8Q6PL24 325 aaPredicted RBP17.02■□□□□ 0.32
ATG4D-206ENST00000586863 USP17L2Q6R6M4 530 aa17.02■□□□□ 0.32
ATG4D-206ENST00000586863 GPRC5AQ8NFJ5 357 aa17.02■□□□□ 0.32
ATG4D-206ENST00000586863 DIS3LQ8TF46 1054 aaKnown RBP17.02■□□□□ 0.32
ATG4D-206ENST00000586863 TRIB2Q92519 343 aa17.02■□□□□ 0.32
ATG4D-206ENST00000586863 RBPJLQ9UBG7 517 aa17.02■□□□□ 0.32
ATG4D-206ENST00000586863 COG6Q9Y2V7 657 aa17.02■□□□□ 0.32
ATG4D-206ENST00000586863 MYH8P13535 1937 aa17.02■□□□□ 0.31
ATG4D-206ENST00000586863 CYP2B6P20813 491 aa17.01■□□□□ 0.31
ATG4D-206ENST00000586863 SHMT1P34896 483 aa17.01■□□□□ 0.31
ATG4D-206ENST00000586863 ERVK-9P63128 1117 aa17.01■□□□□ 0.31
ATG4D-206ENST00000586863 ERVK-24P63145 666 aa17.01■□□□□ 0.31
ATG4D-206ENST00000586863 EVX2Q03828 476 aa17.01■□□□□ 0.31
ATG4D-206ENST00000586863 RAB3GAP1Q15042 981 aa17.01■□□□□ 0.31
ATG4D-206ENST00000586863 Q3C1V9 767 aa17.01■□□□□ 0.31
ATG4D-206ENST00000586863 KIF1BPQ96EK5 621 aa17.01■□□□□ 0.31
ATG4D-206ENST00000586863 PAWRQ96IZ0 340 aaKnown RBP17.01■□□□□ 0.31
ATG4D-206ENST00000586863 C12orf42Q96LP6 360 aa17.01■□□□□ 0.31
ATG4D-206ENST00000586863 FEZ1Q99689 392 aa17.01■□□□□ 0.31
ATG4D-206ENST00000586863 PAGR1Q9BTK6 254 aa17.01■□□□□ 0.31
ATG4D-206ENST00000586863 PORCNQ9H237 461 aa17.01■□□□□ 0.31
ATG4D-206ENST00000586863 RBM27Q9P2N5 1060 aaKnown RBP17.01■□□□□ 0.31
ATG4D-206ENST00000586863 MYH7P12883 1935 aa17.01■□□□□ 0.31
ATG4D-206ENST00000586863 BAZ2AQ9UIF9 1905 aaKnown RBP17.01■□□□□ 0.31
ATG4D-206ENST00000586863 RPTORQ8N122 1335 aa17■□□□□ 0.31
ATG4D-206ENST00000586863 MAGEB6P1A0A0J9YX57 407 aa17■□□□□ 0.31
ATG4D-206ENST00000586863 GOLIM4O00461 696 aa17■□□□□ 0.31
ATG4D-206ENST00000586863 MS4A1P11836 297 aa17■□□□□ 0.31
ATG4D-206ENST00000586863 TTF1Q15361 905 aaPredicted RBP17■□□□□ 0.31
ATG4D-206ENST00000586863 ABCB5Q2M3G0 1257 aa17■□□□□ 0.31
ATG4D-206ENST00000586863 CERKLQ49MI3 558 aaPredicted RBP17■□□□□ 0.31
ATG4D-206ENST00000586863 SLC9C2Q5TAH2 1124 aa17■□□□□ 0.31
ATG4D-206ENST00000586863 TTC6Q86TZ1 520 aa17■□□□□ 0.31
ATG4D-206ENST00000586863 RPAP2Q8IXW5 612 aaPredicted RBP17■□□□□ 0.31
ATG4D-206ENST00000586863 CLASRPQ8N2M8 674 aaKnown RBP17■□□□□ 0.31
ATG4D-206ENST00000586863 ACER1Q8TDN7 264 aa17■□□□□ 0.31
ATG4D-206ENST00000586863 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17■□□□□ 0.31
ATG4D-206ENST00000586863 SOCS4Q8WXH5 440 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms