RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 TTF2Q9UNY4 1162 aaKnown RBP11.97□□□□□ -0.49
APOC1-201ENST00000586638 ZDHHC9Q9Y397 364 aa11.97□□□□□ -0.49
APOC1-201ENST00000586638 MYH15Q9Y2K3 1946 aa11.97□□□□□ -0.49
APOC1-201ENST00000586638 ROBO3Q96MS0 1386 aa11.96□□□□□ -0.49
APOC1-201ENST00000586638 TRPM7Q96QT4 1865 aa11.96□□□□□ -0.49
APOC1-201ENST00000586638 SIPA1L1O43166 1804 aa11.96□□□□□ -0.49
APOC1-201ENST00000586638 GOLGA8BA8MQT2 603 aa11.96□□□□□ -0.49
APOC1-201ENST00000586638 JAK2O60674 1132 aa11.96□□□□□ -0.49
APOC1-201ENST00000586638 PFKFB2O60825 505 aa11.96□□□□□ -0.49
APOC1-201ENST00000586638 EGFRP00533 1210 aa11.96□□□□□ -0.49
APOC1-201ENST00000586638 RHBDL3P58872 404 aa11.96□□□□□ -0.49
APOC1-201ENST00000586638 DACT2Q5SW24 774 aa11.96□□□□□ -0.49
APOC1-201ENST00000586638 SLF2Q8IX21 1173 aa11.96□□□□□ -0.49
APOC1-201ENST00000586638 TGFBRAP1Q8WUH2 860 aa11.96□□□□□ -0.49
APOC1-201ENST00000586638 RNF41Q9H4P4 317 aaPredicted RBP11.96□□□□□ -0.49
APOC1-201ENST00000586638 NCOA5Q9HCD5 579 aaKnown RBP11.96□□□□□ -0.49
APOC1-201ENST00000586638 SAP30BPQ9UHR5 308 aaKnown RBP11.96□□□□□ -0.49
APOC1-201ENST00000586638 BRPF3Q9ULD4 1205 aa11.96□□□□□ -0.49
APOC1-201ENST00000586638 SUGT1Q9Y2Z0 365 aa11.96□□□□□ -0.49
APOC1-201ENST00000586638 THSD7BQ9C0I4 1608 aa11.96□□□□□ -0.5
APOC1-201ENST00000586638 FLT1P17948 1338 aa11.95□□□□□ -0.5
APOC1-201ENST00000586638 USP17L3A6NCW0 530 aa11.95□□□□□ -0.5
APOC1-201ENST00000586638 USP17L4A6NCW7 530 aa11.95□□□□□ -0.5
APOC1-201ENST00000586638 ADM5C9JUS6 153 aa11.95□□□□□ -0.5
APOC1-201ENST00000586638 PRDM1O75626 825 aa11.95□□□□□ -0.5
APOC1-201ENST00000586638 TRPA1O75762 1119 aa11.95□□□□□ -0.5
APOC1-201ENST00000586638 BRD1O95696 1058 aa11.95□□□□□ -0.5
APOC1-201ENST00000586638 VIL1P09327 827 aaKnown RBP11.95□□□□□ -0.5
APOC1-201ENST00000586638 CCT2P78371 535 aaKnown RBP11.95□□□□□ -0.5
APOC1-201ENST00000586638 SBK1Q52WX2 424 aa11.95□□□□□ -0.5
APOC1-201ENST00000586638 TMEM67Q5HYA8 995 aa11.95□□□□□ -0.5
APOC1-201ENST00000586638 STRIP1Q5VSL9 837 aa11.95□□□□□ -0.5
APOC1-201ENST00000586638 USP17L1Q7RTZ2 530 aa11.95□□□□□ -0.5
APOC1-201ENST00000586638 FBXL16Q8N461 479 aa11.95□□□□□ -0.5
APOC1-201ENST00000586638 ZKSCAN3Q9BRR0 538 aa11.95□□□□□ -0.5
APOC1-201ENST00000586638 LY9Q9HBG7 655 aa11.95□□□□□ -0.5
APOC1-201ENST00000586638 RNF186Q9NXI6 227 aa11.95□□□□□ -0.5
APOC1-201ENST00000586638 MCM9Q9NXL9 1143 aa11.95□□□□□ -0.5
APOC1-201ENST00000586638 SAGE1Q9NXZ1 904 aa11.95□□□□□ -0.5
APOC1-201ENST00000586638 ANGEL1Q9UNK9 670 aaKnown RBP11.95□□□□□ -0.5
APOC1-201ENST00000586638 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.95□□□□□ -0.5
APOC1-201ENST00000586638 MYH6P13533 1939 aa11.94□□□□□ -0.5
APOC1-201ENST00000586638 IFIT3O14879 490 aaKnown RBP11.94□□□□□ -0.5
APOC1-201ENST00000586638 PLCG2P16885 1265 aa11.94□□□□□ -0.5
APOC1-201ENST00000586638 PDIA3P30101 505 aaKnown RBP11.94□□□□□ -0.5
APOC1-201ENST00000586638 MCM4P33991 863 aa11.94□□□□□ -0.5
APOC1-201ENST00000586638 CRKP46108 304 aa11.94□□□□□ -0.5
APOC1-201ENST00000586638 FOSBP53539 338 aa11.94□□□□□ -0.5
APOC1-201ENST00000586638 FKBP1AP62942 108 aaKnown RBP11.94□□□□□ -0.5
APOC1-201ENST00000586638 CERS3Q8IU89 383 aa11.94□□□□□ -0.5
APOC1-201ENST00000586638 KIAA0825Q8IV33 1275 aa11.94□□□□□ -0.5
APOC1-201ENST00000586638 SULF1Q8IWU6 871 aa11.94□□□□□ -0.5
APOC1-201ENST00000586638 NSUN7Q8NE18 718 aaKnown RBP11.94□□□□□ -0.5
APOC1-201ENST00000586638 DYNLL2Q96FJ2 89 aa11.94□□□□□ -0.5
APOC1-201ENST00000586638 ZNF274Q96GC6 653 aaPredicted RBP11.94□□□□□ -0.5
APOC1-201ENST00000586638 FAM163AQ96GL9 167 aaPredicted RBP11.94□□□□□ -0.5
APOC1-201ENST00000586638 TMEM87BQ96K49 555 aa11.94□□□□□ -0.5
APOC1-201ENST00000586638 CSRNP1Q96S65 589 aa11.94□□□□□ -0.5
APOC1-201ENST00000586638 PCDHAC2Q9Y5I4 1007 aa11.94□□□□□ -0.5
APOC1-201ENST00000586638 TCHHQ07283 1943 aa11.94□□□□□ -0.5
APOC1-201ENST00000586638 PTPDC1A2A3K4 754 aa11.93□□□□□ -0.5
APOC1-201ENST00000586638 CTDNEP1O95476 244 aa11.93□□□□□ -0.5
APOC1-201ENST00000586638 RXRAP19793 462 aa11.93□□□□□ -0.5
APOC1-201ENST00000586638 EVCP57679 992 aa11.93□□□□□ -0.5
APOC1-201ENST00000586638 PICALMQ13492 652 aa11.93□□□□□ -0.5
APOC1-201ENST00000586638 KIF4BQ2VIQ3 1234 aa11.93□□□□□ -0.5
APOC1-201ENST00000586638 C12orf60Q5U649 245 aa11.93□□□□□ -0.5
APOC1-201ENST00000586638 NFXL1Q6ZNB6 911 aa11.93□□□□□ -0.5
APOC1-201ENST00000586638 IGDCC4Q8TDY8 1250 aa11.93□□□□□ -0.5
APOC1-201ENST00000586638 ESR2Q92731 530 aa11.93□□□□□ -0.5
APOC1-201ENST00000586638 TEKT1Q969V4 418 aa11.93□□□□□ -0.5
APOC1-201ENST00000586638 DDX11Q96FC9 970 aa11.93□□□□□ -0.5
APOC1-201ENST00000586638 CHAMP1Q96JM3 812 aa11.93□□□□□ -0.5
APOC1-201ENST00000586638 GBP4Q96PP9 640 aa11.93□□□□□ -0.5
APOC1-201ENST00000586638 MYL10Q9BUA6 226 aa11.93□□□□□ -0.5
APOC1-201ENST00000586638 ZSWIM5Q9P217 1185 aa11.93□□□□□ -0.5
APOC1-201ENST00000586638 HPS5Q9UPZ3 1129 aa11.93□□□□□ -0.5
APOC1-201ENST00000586638 TNKSO95271 1327 aa11.92□□□□□ -0.5
APOC1-201ENST00000586638 VPS37CA5D8V6 355 aaPredicted RBP11.92□□□□□ -0.5
APOC1-201ENST00000586638 GOLGA8AA7E2F4 631 aa11.92□□□□□ -0.5
APOC1-201ENST00000586638 STX6O43752 255 aa11.92□□□□□ -0.5
APOC1-201ENST00000586638 ORC4O43929 436 aa11.92□□□□□ -0.5
APOC1-201ENST00000586638 RANBP6O60518 1105 aaKnown RBP11.92□□□□□ -0.5
APOC1-201ENST00000586638 PPFIA3O75145 1194 aa11.92□□□□□ -0.5
APOC1-201ENST00000586638 BAG4O95429 457 aaKnown RBP11.92□□□□□ -0.5
APOC1-201ENST00000586638 POLR3DP05423 398 aaPredicted RBP11.92□□□□□ -0.5
APOC1-201ENST00000586638 SLC3A2P08195 630 aaKnown RBP11.92□□□□□ -0.5
APOC1-201ENST00000586638 SLC10A3P09131 477 aa11.92□□□□□ -0.5
APOC1-201ENST00000586638 SYT1P21579 422 aa11.92□□□□□ -0.5
APOC1-201ENST00000586638 WTAPQ15007 396 aa11.92□□□□□ -0.5
APOC1-201ENST00000586638 APOA5Q6Q788 366 aa11.92□□□□□ -0.5
APOC1-201ENST00000586638 MICU3Q86XE3 530 aa11.92□□□□□ -0.5
APOC1-201ENST00000586638 AMOTL1Q8IY63 956 aa11.92□□□□□ -0.5
APOC1-201ENST00000586638 REM2Q8IYK8 340 aaPredicted RBP11.92□□□□□ -0.5
APOC1-201ENST00000586638 SLC44A5Q8NCS7 719 aa11.92□□□□□ -0.5
APOC1-201ENST00000586638 SMARCC2Q8TAQ2 1214 aa11.92□□□□□ -0.5
APOC1-201ENST00000586638 CDCA5Q96FF9 252 aa11.92□□□□□ -0.5
APOC1-201ENST00000586638 UBAC1Q9BSL1 405 aa11.92□□□□□ -0.5
APOC1-201ENST00000586638 DDX4Q9NQI0 724 aaKnown RBP11.92□□□□□ -0.5
APOC1-201ENST00000586638 ERICH2A1L162 156 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms