RNA–Protein interactions for RNA: ENST00000586538.1

ACTN4-209, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-209ENST00000586538 GPATCH3Q96I76 525 aa13.62□□□□□ -0.23
ACTN4-209ENST00000586538 LRRCC1Q9C099 1032 aa13.62□□□□□ -0.23
ACTN4-209ENST00000586538 ZBTB21Q9ULJ3 1066 aa13.62□□□□□ -0.23
ACTN4-209ENST00000586538 POLR3DP05423 398 aaPredicted RBP13.61□□□□□ -0.23
ACTN4-209ENST00000586538 DYNLL1P63167 89 aaKnown RBP13.61□□□□□ -0.23
ACTN4-209ENST00000586538 CAP1Q01518 475 aa13.61□□□□□ -0.23
ACTN4-209ENST00000586538 PRKCZQ05513 592 aa13.61□□□□□ -0.23
ACTN4-209ENST00000586538 IRF5Q13568 498 aa13.61□□□□□ -0.23
ACTN4-209ENST00000586538 MTMR2Q13614 643 aa13.61□□□□□ -0.23
ACTN4-209ENST00000586538 ANKRD13CQ8N6S4 541 aa13.61□□□□□ -0.23
ACTN4-209ENST00000586538 PXYLP1Q8TE99 480 aa13.61□□□□□ -0.23
ACTN4-209ENST00000586538 SH3TC2Q8TF17 1288 aa13.61□□□□□ -0.23
ACTN4-209ENST00000586538 ANTXR1Q9H6X2 564 aa13.61□□□□□ -0.23
ACTN4-209ENST00000586538 PAG1Q9NWQ8 432 aa13.61□□□□□ -0.23
ACTN4-209ENST00000586538 SAP30BPQ9UHR5 308 aaKnown RBP13.61□□□□□ -0.23
ACTN4-209ENST00000586538 SIPA1L1O43166 1804 aa13.61□□□□□ -0.23
ACTN4-209ENST00000586538 GOLIM4O00461 696 aa13.6□□□□□ -0.23
ACTN4-209ENST00000586538 PDE6AP16499 860 aa13.6□□□□□ -0.23
ACTN4-209ENST00000586538 ATP5JP18859 108 aa13.6□□□□□ -0.23
ACTN4-209ENST00000586538 HOXA7P31268 230 aaPredicted RBP13.6□□□□□ -0.23
ACTN4-209ENST00000586538 TREML2Q5T2D2 321 aa13.6□□□□□ -0.23
ACTN4-209ENST00000586538 USP17L2Q6R6M4 530 aa13.6□□□□□ -0.23
ACTN4-209ENST00000586538 FEZ1Q99689 392 aa13.6□□□□□ -0.23
ACTN4-209ENST00000586538 ASCC2Q9H1I8 757 aaPredicted RBP13.6□□□□□ -0.23
ACTN4-209ENST00000586538 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.6□□□□□ -0.23
ACTN4-209ENST00000586538 CENPFP49454 3210 aa13.6□□□□□ -0.23
ACTN4-209ENST00000586538 ZSWIM8A7E2V4 1837 aa13.6□□□□□ -0.23
ACTN4-209ENST00000586538 NAV1Q8NEY1 1877 aa13.59□□□□□ -0.23
ACTN4-209ENST00000586538 KIAA0100Q14667 2235 aaKnown RBP13.59□□□□□ -0.23
ACTN4-209ENST00000586538 TNRC18O15417 2968 aaPredicted RBP13.59□□□□□ -0.23
ACTN4-209ENST00000586538 GDF11O95390 407 aa13.59□□□□□ -0.23
ACTN4-209ENST00000586538 SLURP2P0DP57 97 aa13.59□□□□□ -0.23
ACTN4-209ENST00000586538 LRRFIP1Q32MZ4 808 aaKnown RBP13.59□□□□□ -0.23
ACTN4-209ENST00000586538 CERKLQ49MI3 558 aaPredicted RBP13.59□□□□□ -0.23
ACTN4-209ENST00000586538 TATDN1Q6P1N9 297 aa13.59□□□□□ -0.23
ACTN4-209ENST00000586538 CCDC84Q86UT8 332 aaPredicted RBP13.59□□□□□ -0.23
ACTN4-209ENST00000586538 CCAR1Q8IX12 1150 aaKnown RBP13.59□□□□□ -0.23
ACTN4-209ENST00000586538 RIOK1Q9BRS2 568 aaKnown RBP13.59□□□□□ -0.23
ACTN4-209ENST00000586538 DNAJC18Q9H819 358 aa13.59□□□□□ -0.23
ACTN4-209ENST00000586538 NDUFB9Q9Y6M9 179 aa13.59□□□□□ -0.23
ACTN4-209ENST00000586538 ZNF532Q9HCE3 1301 aa13.59□□□□□ -0.23
ACTN4-209ENST00000586538 ADCY3O60266 1144 aa13.58□□□□□ -0.24
ACTN4-209ENST00000586538 ECM2O94769 699 aaPredicted RBP13.58□□□□□ -0.24
ACTN4-209ENST00000586538 EN2P19622 333 aaPredicted RBP13.58□□□□□ -0.24
ACTN4-209ENST00000586538 CTGFP29279 349 aa13.58□□□□□ -0.24
ACTN4-209ENST00000586538 FLT3LGP49771 235 aa13.58□□□□□ -0.24
ACTN4-209ENST00000586538 ABCB5Q2M3G0 1257 aa13.58□□□□□ -0.24
ACTN4-209ENST00000586538 SIRT2Q8IXJ6 389 aa13.58□□□□□ -0.24
ACTN4-209ENST00000586538 RNF208Q9H0X6 261 aa13.58□□□□□ -0.24
ACTN4-209ENST00000586538 ATP8A2Q9NTI2 1148 aa13.58□□□□□ -0.24
ACTN4-209ENST00000586538 MORF4L1Q9UBU8 362 aa13.58□□□□□ -0.24
ACTN4-209ENST00000586538 SWAP70Q9UH65 585 aa13.58□□□□□ -0.24
ACTN4-209ENST00000586538 DDX60LQ5H9U9 1706 aaKnown RBP13.57□□□□□ -0.24
ACTN4-209ENST00000586538 GH2P01242 217 aa13.57□□□□□ -0.24
ACTN4-209ENST00000586538 GJB1P08034 283 aa13.57□□□□□ -0.24
ACTN4-209ENST00000586538 GJA8P48165 433 aa13.57□□□□□ -0.24
ACTN4-209ENST00000586538 CCNA1P78396 465 aa13.57□□□□□ -0.24
ACTN4-209ENST00000586538 RRP1BQ14684 758 aaKnown RBP13.57□□□□□ -0.24
ACTN4-209ENST00000586538 RAB3GAP1Q15042 981 aa13.57□□□□□ -0.24
ACTN4-209ENST00000586538 UBE3CQ15386 1083 aa13.57□□□□□ -0.24
ACTN4-209ENST00000586538 TRMT44Q8IYL2 757 aaKnown RBP13.57□□□□□ -0.24
ACTN4-209ENST00000586538 GPRC5AQ8NFJ5 357 aa13.57□□□□□ -0.24
ACTN4-209ENST00000586538 SOCS4Q8WXH5 440 aa13.57□□□□□ -0.24
ACTN4-209ENST00000586538 C12orf42Q96LP6 360 aa13.57□□□□□ -0.24
ACTN4-209ENST00000586538 HAUS7Q99871 368 aa13.57□□□□□ -0.24
ACTN4-209ENST00000586538 BCL11AQ9H165 835 aa13.57□□□□□ -0.24
ACTN4-209ENST00000586538 SH2D4AQ9H788 454 aa13.57□□□□□ -0.24
ACTN4-209ENST00000586538 CWC22Q9HCG8 908 aaKnown RBP13.57□□□□□ -0.24
ACTN4-209ENST00000586538 MCM9Q9NXL9 1143 aa13.57□□□□□ -0.24
ACTN4-209ENST00000586538 MYCP01106 439 aaPredicted RBP13.56□□□□□ -0.24
ACTN4-209ENST00000586538 CCL5P13501 91 aa13.56□□□□□ -0.24
ACTN4-209ENST00000586538 MAPK4P31152 587 aa13.56□□□□□ -0.24
ACTN4-209ENST00000586538 ADD2P35612 726 aa13.56□□□□□ -0.24
ACTN4-209ENST00000586538 HERVK_113P62684 666 aa13.56□□□□□ -0.24
ACTN4-209ENST00000586538 HTATIP2Q9BUP3 242 aa13.56□□□□□ -0.24
ACTN4-209ENST00000586538 BOLA2Q9H3K6 86 aa13.56□□□□□ -0.24
ACTN4-209ENST00000586538 ZBTB47Q9UFB7 747 aaPredicted RBP13.56□□□□□ -0.24
ACTN4-209ENST00000586538 USP17L15C9J2P7 530 aa13.55□□□□□ -0.24
ACTN4-209ENST00000586538 USP17L13C9JLJ4 530 aa13.55□□□□□ -0.24
ACTN4-209ENST00000586538 USP17L11C9JVI0 530 aa13.55□□□□□ -0.24
ACTN4-209ENST00000586538 USP17L18D6R9N7 530 aa13.55□□□□□ -0.24
ACTN4-209ENST00000586538 USP17L22D6RA61 530 aa13.55□□□□□ -0.24
ACTN4-209ENST00000586538 USP17L17D6RBQ6 530 aa13.55□□□□□ -0.24
ACTN4-209ENST00000586538 USP17L19D6RCP7 530 aa13.55□□□□□ -0.24
ACTN4-209ENST00000586538 USP17L20D6RJB6 530 aa13.55□□□□□ -0.24
ACTN4-209ENST00000586538 GLRX3O76003 335 aaKnown RBP13.55□□□□□ -0.24
ACTN4-209ENST00000586538 HMGCRP04035 888 aa13.55□□□□□ -0.24
ACTN4-209ENST00000586538 USP17L24Q0WX57 530 aa13.55□□□□□ -0.24
ACTN4-209ENST00000586538 KIAA1683Q9H0B3 1180 aa13.55□□□□□ -0.24
ACTN4-209ENST00000586538 DCP1AQ9NPI6 582 aaPredicted RBP13.55□□□□□ -0.24
ACTN4-209ENST00000586538 ECHDC1Q9NTX5 307 aa13.55□□□□□ -0.24
ACTN4-209ENST00000586538 GABRQQ9UN88 632 aa13.55□□□□□ -0.24
ACTN4-209ENST00000586538 BRCA2P51587 3418 aa13.55□□□□□ -0.24
ACTN4-209ENST00000586538 MYH7P12883 1935 aa13.54□□□□□ -0.24
ACTN4-209ENST00000586538 TCRBV5S4A2TA0A5A2 114 aa13.54□□□□□ -0.24
ACTN4-209ENST00000586538 MPHOSPH10O00566 681 aaKnown RBP13.54□□□□□ -0.24
ACTN4-209ENST00000586538 ERC2O15083 957 aa13.54□□□□□ -0.24
ACTN4-209ENST00000586538 INHAP05111 366 aa13.54□□□□□ -0.24
ACTN4-209ENST00000586538 MTFR1Q15390 333 aa13.54□□□□□ -0.24
ACTN4-209ENST00000586538 TMEM179Q6ZVK1 233 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms