RNA–Protein interactions for RNA: ENST00000586134.5

ZNF540-203, Transcript of zinc finger protein 540, humanhuman

TSL 5

Gene ZNF540, Length 2,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-203ENST00000586134 CHD1LQ86WJ1 897 aa11.33□□□□□ -0.6
ZNF540-203ENST00000586134 CCDC50Q8IVM0 306 aa11.33□□□□□ -0.6
ZNF540-203ENST00000586134 SYNE4Q8N205 404 aa11.33□□□□□ -0.6
ZNF540-203ENST00000586134 CEP112Q8N8E3 955 aa11.33□□□□□ -0.6
ZNF540-203ENST00000586134 FAM71BQ8TC56 605 aa11.33□□□□□ -0.6
ZNF540-203ENST00000586134 HNRNPLLQ8WVV9 542 aaKnown RBP11.33□□□□□ -0.6
ZNF540-203ENST00000586134 PLEKHG4BQ96PX9 1271 aa11.33□□□□□ -0.6
ZNF540-203ENST00000586134 RTFDC1Q9BY42 306 aaPredicted RBP11.33□□□□□ -0.6
ZNF540-203ENST00000586134 DDX19BQ9UMR2 479 aa11.33□□□□□ -0.6
ZNF540-203ENST00000586134 ATP6V0A2Q9Y487 856 aa11.33□□□□□ -0.6
ZNF540-203ENST00000586134 GOLGA6CA6NDK9 693 aa11.33□□□□□ -0.6
ZNF540-203ENST00000586134 GOLGA6BA6NDN3 693 aa11.33□□□□□ -0.6
ZNF540-203ENST00000586134 H3BQF6 201 aa11.33□□□□□ -0.6
ZNF540-203ENST00000586134 DDX58O95786 925 aaKnown RBP11.33□□□□□ -0.6
ZNF540-203ENST00000586134 GOLGA6DP0CG33 693 aa11.33□□□□□ -0.6
ZNF540-203ENST00000586134 INPP5BP32019 993 aa11.33□□□□□ -0.6
ZNF540-203ENST00000586134 LIG3P49916 1009 aa11.33□□□□□ -0.6
ZNF540-203ENST00000586134 RASA3Q14644 834 aa11.33□□□□□ -0.6
ZNF540-203ENST00000586134 LRRFIP1Q32MZ4 808 aaKnown RBP11.33□□□□□ -0.6
ZNF540-203ENST00000586134 C8orf58Q8NAV2 365 aa11.33□□□□□ -0.6
ZNF540-203ENST00000586134 ACRBPQ8NEB7 543 aa11.33□□□□□ -0.6
ZNF540-203ENST00000586134 SUPT20HQ8NEM7 779 aa11.33□□□□□ -0.6
ZNF540-203ENST00000586134 TDRD7Q8NHU6 1098 aaKnown RBP11.33□□□□□ -0.6
ZNF540-203ENST00000586134 CCDC34Q96HJ3 373 aa11.33□□□□□ -0.6
ZNF540-203ENST00000586134 SLX1AQ9BQ83 275 aa11.33□□□□□ -0.6
ZNF540-203ENST00000586134 TRIM5Q9C035 493 aa11.33□□□□□ -0.6
ZNF540-203ENST00000586134 GOLGA6AQ9NYA3 693 aa11.33□□□□□ -0.6
ZNF540-203ENST00000586134 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.33□□□□□ -0.6
ZNF540-203ENST00000586134 ABCC4O15439 1325 aa11.32□□□□□ -0.6
ZNF540-203ENST00000586134 EME2A4GXA9 379 aaPredicted RBP11.32□□□□□ -0.6
ZNF540-203ENST00000586134 EBAG9O00559 213 aa11.32□□□□□ -0.6
ZNF540-203ENST00000586134 FBXW10Q5XX13 1052 aa11.32□□□□□ -0.6
ZNF540-203ENST00000586134 SPATS2Q86XZ4 545 aaKnown RBP11.32□□□□□ -0.6
ZNF540-203ENST00000586134 SP8Q8IXZ3 490 aa11.32□□□□□ -0.6
ZNF540-203ENST00000586134 XAGE2Q96GT9 111 aa11.32□□□□□ -0.6
ZNF540-203ENST00000586134 KIF9Q9HAQ2 790 aa11.32□□□□□ -0.6
ZNF540-203ENST00000586134 SUN2Q9UH99 717 aa11.32□□□□□ -0.6
ZNF540-203ENST00000586134 DNAI1Q9UI46 699 aa11.32□□□□□ -0.6
ZNF540-203ENST00000586134 AKAP2Q9Y2D5 859 aa11.32□□□□□ -0.6
ZNF540-203ENST00000586134 LTBP1Q14766 1721 aa11.32□□□□□ -0.6
ZNF540-203ENST00000586134 TAF1P21675 1872 aa11.32□□□□□ -0.6
ZNF540-203ENST00000586134 FSBPO95073 299 aa11.31□□□□□ -0.6
ZNF540-203ENST00000586134 ECEL1O95672 775 aa11.31□□□□□ -0.6
ZNF540-203ENST00000586134 GRAPQ13588 217 aa11.31□□□□□ -0.6
ZNF540-203ENST00000586134 HSP90B2PQ58FF3 399 aa11.31□□□□□ -0.6
ZNF540-203ENST00000586134 SARM1Q6SZW1 724 aa11.31□□□□□ -0.6
ZNF540-203ENST00000586134 C3orf67Q6ZVT6 689 aa11.31□□□□□ -0.6
ZNF540-203ENST00000586134 HDXQ7Z353 690 aa11.31□□□□□ -0.6
ZNF540-203ENST00000586134 GRAPLQ8TC17 118 aaPredicted RBP11.31□□□□□ -0.6
ZNF540-203ENST00000586134 MRFAP1L1Q96HT8 127 aa11.31□□□□□ -0.6
ZNF540-203ENST00000586134 RMI1Q9H9A7 625 aa11.31□□□□□ -0.6
ZNF540-203ENST00000586134 USP27XA6NNY8 438 aa11.31□□□□□ -0.6
ZNF540-203ENST00000586134 GSDMDP57764 484 aa11.31□□□□□ -0.6
ZNF540-203ENST00000586134 TUBB4BP68371 445 aa11.31□□□□□ -0.6
ZNF540-203ENST00000586134 ZKSCAN2Q63HK3 967 aa11.31□□□□□ -0.6
ZNF540-203ENST00000586134 BRAPQ7Z569 592 aa11.31□□□□□ -0.6
ZNF540-203ENST00000586134 RIC3Q7Z5B4 369 aa11.31□□□□□ -0.6
ZNF540-203ENST00000586134 DZIP1LQ8IYY4 767 aaKnown RBP11.31□□□□□ -0.6
ZNF540-203ENST00000586134 GPC2Q8N158 579 aa11.31□□□□□ -0.6
ZNF540-203ENST00000586134 ZBTB38Q8NAP3 1195 aaPredicted RBP11.31□□□□□ -0.6
ZNF540-203ENST00000586134 PROCA1Q8NCQ7 364 aaPredicted RBP11.31□□□□□ -0.6
ZNF540-203ENST00000586134 C3orf20Q8ND61 904 aa11.31□□□□□ -0.6
ZNF540-203ENST00000586134 JDP2Q8WYK2 163 aa11.31□□□□□ -0.6
ZNF540-203ENST00000586134 RABGGTAQ92696 567 aa11.31□□□□□ -0.6
ZNF540-203ENST00000586134 ATP6V0A4Q9HBG4 840 aa11.31□□□□□ -0.6
ZNF540-203ENST00000586134 ZNF277Q9NRM2 450 aaPredicted RBP11.31□□□□□ -0.6
ZNF540-203ENST00000586134 NRBP1Q9UHY1 535 aa11.31□□□□□ -0.6
ZNF540-203ENST00000586134 FAM169AQ9Y6X4 670 aa11.31□□□□□ -0.6
ZNF540-203ENST00000586134 RPAP1Q9BWH6 1393 aaPredicted RBP11.3□□□□□ -0.6
ZNF540-203ENST00000586134 ZSCAN9O15535 394 aaPredicted RBP11.3□□□□□ -0.6
ZNF540-203ENST00000586134 EZRP15311 586 aaKnown RBP11.3□□□□□ -0.6
ZNF540-203ENST00000586134 SFSWAPQ12872 951 aaKnown RBP11.3□□□□□ -0.6
ZNF540-203ENST00000586134 SPATA21Q7Z572 469 aa11.3□□□□□ -0.6
ZNF540-203ENST00000586134 MFN1Q8IWA4 741 aa11.3□□□□□ -0.6
ZNF540-203ENST00000586134 PARD3BQ8TEW8 1205 aa11.3□□□□□ -0.6
ZNF540-203ENST00000586134 METTL22Q9BUU2 404 aaPredicted RBP11.3□□□□□ -0.6
ZNF540-203ENST00000586134 POTEB2H3BUK9 544 aa11.3□□□□□ -0.6
ZNF540-203ENST00000586134 AHCYL1O43865 530 aa11.3□□□□□ -0.6
ZNF540-203ENST00000586134 PCCAP05165 728 aaPredicted RBP11.3□□□□□ -0.6
ZNF540-203ENST00000586134 LONRF2Q1L5Z9 754 aa11.3□□□□□ -0.6
ZNF540-203ENST00000586134 OLFM4Q6UX06 510 aa11.3□□□□□ -0.6
ZNF540-203ENST00000586134 PHAXQ9H814 394 aaKnown RBP11.3□□□□□ -0.6
ZNF540-203ENST00000586134 LMCD1Q9NZU5 365 aa11.3□□□□□ -0.6
ZNF540-203ENST00000586134 ATP6V1DQ9Y5K8 247 aa11.3□□□□□ -0.6
ZNF540-203ENST00000586134 CDHR2Q9BYE9 1310 aa11.29□□□□□ -0.6
ZNF540-203ENST00000586134 COL4A5P29400 1685 aa11.29□□□□□ -0.6
ZNF540-203ENST00000586134 DUOX1Q9NRD9 1551 aa11.29□□□□□ -0.6
ZNF540-203ENST00000586134 DDNO94850 711 aaPredicted RBP11.29□□□□□ -0.6
ZNF540-203ENST00000586134 NAP1L1P55209 391 aaKnown RBP11.29□□□□□ -0.6
ZNF540-203ENST00000586134 PLCB4Q15147 1175 aa11.29□□□□□ -0.6
ZNF540-203ENST00000586134 TWISTNBQ3B726 338 aaPredicted RBP11.29□□□□□ -0.6
ZNF540-203ENST00000586134 CCDC178Q5BJE1 867 aa11.29□□□□□ -0.6
ZNF540-203ENST00000586134 TLDC1Q6P9B6 456 aa11.29□□□□□ -0.6
ZNF540-203ENST00000586134 KSR2Q6VAB6 950 aa11.29□□□□□ -0.6
ZNF540-203ENST00000586134 MYLK4Q86YV6 388 aaPredicted RBP11.29□□□□□ -0.6
ZNF540-203ENST00000586134 CNNM3Q8NE01 707 aa11.29□□□□□ -0.6
ZNF540-203ENST00000586134 OR8K1Q8NGG5 319 aa11.29□□□□□ -0.6
ZNF540-203ENST00000586134 GCC1Q96CN9 775 aa11.29□□□□□ -0.6
ZNF540-203ENST00000586134 AGAP3Q96P47 875 aa11.29□□□□□ -0.6
ZNF540-203ENST00000586134 IRX2Q9BZI1 471 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms