RNA–Protein interactions for RNA: ENST00000585903.1

MBD3-203, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 415 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-203ENST00000585903 DBNLQ9UJU6 430 aaKnown RBP12.93□□□□□ -0.34
MBD3-203ENST00000585903 TNNQ9UQP3 1299 aa12.93□□□□□ -0.34
MBD3-203ENST00000585903 NR2E3Q9Y5X4 410 aa12.93□□□□□ -0.34
MBD3-203ENST00000585903 UNC80Q8N2C7 3258 aa12.92□□□□□ -0.34
MBD3-203ENST00000585903 FARP2O94887 1054 aaPredicted RBP12.92□□□□□ -0.34
MBD3-203ENST00000585903 MYCP01106 439 aaPredicted RBP12.92□□□□□ -0.34
MBD3-203ENST00000585903 HMGCRP04035 888 aa12.92□□□□□ -0.34
MBD3-203ENST00000585903 HLA-DOAP06340 250 aa12.92□□□□□ -0.34
MBD3-203ENST00000585903 XRCC5P13010 732 aaKnown RBP12.92□□□□□ -0.34
MBD3-203ENST00000585903 TRMT44Q8IYL2 757 aaKnown RBP12.92□□□□□ -0.34
MBD3-203ENST00000585903 TGFBRAP1Q8WUH2 860 aa12.92□□□□□ -0.34
MBD3-203ENST00000585903 TRIM34Q9BYJ4 488 aa12.92□□□□□ -0.34
MBD3-203ENST00000585903 UNC93B1Q9H1C4 597 aa12.92□□□□□ -0.34
MBD3-203ENST00000585903 TMOD4Q9NZQ9 345 aa12.92□□□□□ -0.34
MBD3-203ENST00000585903 PLXNB2O15031 1838 aa12.92□□□□□ -0.34
MBD3-203ENST00000585903 FAM196BA6NMK8 535 aa12.91□□□□□ -0.34
MBD3-203ENST00000585903 USP17L10C9JJH3 530 aa12.91□□□□□ -0.34
MBD3-203ENST00000585903 SLURP2P0DP57 97 aa12.91□□□□□ -0.34
MBD3-203ENST00000585903 IRX3P78415 501 aaPredicted RBP12.91□□□□□ -0.34
MBD3-203ENST00000585903 RRP1BQ14684 758 aaKnown RBP12.91□□□□□ -0.34
MBD3-203ENST00000585903 TATDN1Q6P1N9 297 aa12.91□□□□□ -0.34
MBD3-203ENST00000585903 ADGRA1Q86SQ6 560 aa12.91□□□□□ -0.34
MBD3-203ENST00000585903 ITPRIPQ8IWB1 547 aa12.91□□□□□ -0.34
MBD3-203ENST00000585903 CRACR2BQ8N4Y2 399 aaPredicted RBP12.91□□□□□ -0.34
MBD3-203ENST00000585903 SOCS4Q8WXH5 440 aa12.91□□□□□ -0.34
MBD3-203ENST00000585903 DPF3Q92784 378 aa12.91□□□□□ -0.34
MBD3-203ENST00000585903 DNAJC18Q9H819 358 aa12.91□□□□□ -0.34
MBD3-203ENST00000585903 GJD2Q9UKL4 321 aa12.91□□□□□ -0.34
MBD3-203ENST00000585903 RPTORQ8N122 1335 aa12.9□□□□□ -0.34
MBD3-203ENST00000585903 ELNP15502 786 aa12.9□□□□□ -0.34
MBD3-203ENST00000585903 MAPK4P31152 587 aa12.9□□□□□ -0.34
MBD3-203ENST00000585903 ZAP70P43403 619 aa12.9□□□□□ -0.34
MBD3-203ENST00000585903 MAP3K12Q12852 859 aa12.9□□□□□ -0.34
MBD3-203ENST00000585903 MTMR2Q13614 643 aa12.9□□□□□ -0.34
MBD3-203ENST00000585903 CEP85Q6P2H3 762 aa12.9□□□□□ -0.34
MBD3-203ENST00000585903 EAF2Q96CJ1 260 aaPredicted RBP12.9□□□□□ -0.34
MBD3-203ENST00000585903 C12orf42Q96LP6 360 aa12.9□□□□□ -0.34
MBD3-203ENST00000585903 SNRKQ9NRH2 765 aa12.9□□□□□ -0.34
MBD3-203ENST00000585903 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.9□□□□□ -0.34
MBD3-203ENST00000585903 ZBTB21Q9ULJ3 1066 aa12.9□□□□□ -0.34
MBD3-203ENST00000585903 DDX60LQ5H9U9 1706 aaKnown RBP12.9□□□□□ -0.34
MBD3-203ENST00000585903 RLBP1P12271 317 aa12.89□□□□□ -0.35
MBD3-203ENST00000585903 CYP7A1P22680 504 aa12.89□□□□□ -0.35
MBD3-203ENST00000585903 TTF1Q15361 905 aaPredicted RBP12.89□□□□□ -0.35
MBD3-203ENST00000585903 TTC6Q86TZ1 520 aa12.89□□□□□ -0.35
MBD3-203ENST00000585903 CCDC84Q86UT8 332 aaPredicted RBP12.89□□□□□ -0.35
MBD3-203ENST00000585903 MAPKAPK5Q8IW41 473 aa12.89□□□□□ -0.35
MBD3-203ENST00000585903 GPRC5AQ8NFJ5 357 aa12.89□□□□□ -0.35
MBD3-203ENST00000585903 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.89□□□□□ -0.35
MBD3-203ENST00000585903 PIH1D3Q9NQM4 214 aaKnown RBP12.89□□□□□ -0.35
MBD3-203ENST00000585903 SERPINB13Q9UIV8 391 aa12.89□□□□□ -0.35
MBD3-203ENST00000585903 PALD1Q9ULE6 856 aa12.89□□□□□ -0.35
MBD3-203ENST00000585903 TFRCP02786 760 aaKnown RBP12.88□□□□□ -0.35
MBD3-203ENST00000585903 USP14P54578 494 aa12.88□□□□□ -0.35
MBD3-203ENST00000585903 HERVK_113P62684 666 aa12.88□□□□□ -0.35
MBD3-203ENST00000585903 MAP3K21Q5TCX8 1036 aa12.88□□□□□ -0.35
MBD3-203ENST00000585903 USP17L2Q6R6M4 530 aa12.88□□□□□ -0.35
MBD3-203ENST00000585903 LBX2Q6XYB7 198 aa12.88□□□□□ -0.35
MBD3-203ENST00000585903 DEFB118Q96PH6 123 aa12.88□□□□□ -0.35
MBD3-203ENST00000585903 NUDT12Q9BQG2 462 aa12.88□□□□□ -0.35
MBD3-203ENST00000585903 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.88□□□□□ -0.35
MBD3-203ENST00000585903 CHMP4BQ9H444 224 aaKnown RBP12.88□□□□□ -0.35
MBD3-203ENST00000585903 HMX1Q9NP08 348 aaPredicted RBP12.88□□□□□ -0.35
MBD3-203ENST00000585903 SOX1O00570 391 aaPredicted RBP12.87□□□□□ -0.35
MBD3-203ENST00000585903 IDH1O75874 414 aaKnown RBP12.87□□□□□ -0.35
MBD3-203ENST00000585903 ECM2O94769 699 aaPredicted RBP12.87□□□□□ -0.35
MBD3-203ENST00000585903 PDE3AQ14432 1141 aa12.87□□□□□ -0.35
MBD3-203ENST00000585903 NECAB2Q7Z6G3 386 aa12.87□□□□□ -0.35
MBD3-203ENST00000585903 RPAP2Q8IXW5 612 aaPredicted RBP12.87□□□□□ -0.35
MBD3-203ENST00000585903 USP6NLQ92738 828 aa12.87□□□□□ -0.35
MBD3-203ENST00000585903 P2RX7Q99572 595 aaKnown RBP12.87□□□□□ -0.35
MBD3-203ENST00000585903 KIAA1683Q9H0B3 1180 aa12.87□□□□□ -0.35
MBD3-203ENST00000585903 TLR7Q9NYK1 1049 aaKnown RBP12.87□□□□□ -0.35
MBD3-203ENST00000585903 ALPK3Q96L96 1907 aa12.87□□□□□ -0.35
MBD3-203ENST00000585903 EVI5O60447 810 aa12.86□□□□□ -0.35
MBD3-203ENST00000585903 USP5P45974 858 aa12.86□□□□□ -0.35
MBD3-203ENST00000585903 ERVK-9P63128 1117 aa12.86□□□□□ -0.35
MBD3-203ENST00000585903 ERVK-24P63145 666 aa12.86□□□□□ -0.35
MBD3-203ENST00000585903 CCNA1P78396 465 aa12.86□□□□□ -0.35
MBD3-203ENST00000585903 JAG1P78504 1218 aa12.86□□□□□ -0.35
MBD3-203ENST00000585903 MAGEB6Q8N7X4 407 aa12.86□□□□□ -0.35
MBD3-203ENST00000585903 LRCH3Q96II8 777 aa12.86□□□□□ -0.35
MBD3-203ENST00000585903 CCDC8Q9H0W5 538 aaPredicted RBP12.86□□□□□ -0.35
MBD3-203ENST00000585903 C1orf115Q9H7X2 142 aa12.86□□□□□ -0.35
MBD3-203ENST00000585903 EMILIN3Q9NT22 766 aa12.86□□□□□ -0.35
MBD3-203ENST00000585903 RBPJLQ9UBG7 517 aa12.86□□□□□ -0.35
MBD3-203ENST00000585903 OGDHLQ9ULD0 1010 aa12.86□□□□□ -0.35
MBD3-203ENST00000585903 RABGAP1Q9Y3P9 1069 aa12.86□□□□□ -0.35
MBD3-203ENST00000585903 NAV1Q8NEY1 1877 aa12.86□□□□□ -0.35
MBD3-203ENST00000585903 USP17L15C9J2P7 530 aa12.85□□□□□ -0.35
MBD3-203ENST00000585903 USP17L13C9JLJ4 530 aa12.85□□□□□ -0.35
MBD3-203ENST00000585903 USP17L11C9JVI0 530 aa12.85□□□□□ -0.35
MBD3-203ENST00000585903 USP17L18D6R9N7 530 aa12.85□□□□□ -0.35
MBD3-203ENST00000585903 USP17L22D6RA61 530 aa12.85□□□□□ -0.35
MBD3-203ENST00000585903 USP17L17D6RBQ6 530 aa12.85□□□□□ -0.35
MBD3-203ENST00000585903 USP17L19D6RCP7 530 aa12.85□□□□□ -0.35
MBD3-203ENST00000585903 USP17L20D6RJB6 530 aa12.85□□□□□ -0.35
MBD3-203ENST00000585903 HMMRO75330 724 aa12.85□□□□□ -0.35
MBD3-203ENST00000585903 GLRX3O76003 335 aaKnown RBP12.85□□□□□ -0.35
MBD3-203ENST00000585903 GH2P01242 217 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms