RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 AKNAD1Q5T1N1 836 aa17.29■□□□□ 0.36
SCAMP4-209ENST00000585335 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.29■□□□□ 0.36
SCAMP4-209ENST00000585335 SLC44A5Q8NCS7 719 aa17.29■□□□□ 0.36
SCAMP4-209ENST00000585335 CCDC102AQ96A19 550 aa17.29■□□□□ 0.36
SCAMP4-209ENST00000585335 TBC1D2Q9BYX2 928 aa17.29■□□□□ 0.36
SCAMP4-209ENST00000585335 ELP3Q9H9T3 547 aa17.29■□□□□ 0.36
SCAMP4-209ENST00000585335 MYH8P13535 1937 aa17.29■□□□□ 0.36
SCAMP4-209ENST00000585335 OTOFQ9HC10 1997 aa17.28■□□□□ 0.36
SCAMP4-209ENST00000585335 RASSF10A6NK89 507 aa17.28■□□□□ 0.36
SCAMP4-209ENST00000585335 GDF11O95390 407 aa17.28■□□□□ 0.36
SCAMP4-209ENST00000585335 SLURP2P0DP57 97 aa17.28■□□□□ 0.36
SCAMP4-209ENST00000585335 ECE1P42892 770 aa17.28■□□□□ 0.36
SCAMP4-209ENST00000585335 TRDNQ13061 729 aa17.28■□□□□ 0.36
SCAMP4-209ENST00000585335 ERO1BQ86YB8 467 aa17.28■□□□□ 0.36
SCAMP4-209ENST00000585335 STAG1Q8WVM7 1258 aa17.28■□□□□ 0.36
SCAMP4-209ENST00000585335 CLMNQ96JQ2 1002 aa17.28■□□□□ 0.36
SCAMP4-209ENST00000585335 CNNM2Q9H8M5 875 aa17.28■□□□□ 0.36
SCAMP4-209ENST00000585335 SNCAIPQ9Y6H5 919 aa17.28■□□□□ 0.36
SCAMP4-209ENST00000585335 DOCK1Q14185 1865 aa17.28■□□□□ 0.36
SCAMP4-209ENST00000585335 ORC4O43929 436 aa17.27■□□□□ 0.36
SCAMP4-209ENST00000585335 GH2P01242 217 aa17.27■□□□□ 0.36
SCAMP4-209ENST00000585335 ZKSCAN1P17029 563 aaPredicted RBP17.27■□□□□ 0.36
SCAMP4-209ENST00000585335 RRP12Q5JTH9 1297 aaKnown RBP17.27■□□□□ 0.36
SCAMP4-209ENST00000585335 TMEM179Q6ZVK1 233 aa17.27■□□□□ 0.36
SCAMP4-209ENST00000585335 KRT23Q9C075 422 aa17.27■□□□□ 0.36
SCAMP4-209ENST00000585335 AS3MTQ9HBK9 375 aa17.27■□□□□ 0.36
SCAMP4-209ENST00000585335 ZBTB21Q9ULJ3 1066 aa17.27■□□□□ 0.36
SCAMP4-209ENST00000585335 SPDYE5A6NIY4 337 aa17.26■□□□□ 0.35
SCAMP4-209ENST00000585335 USP17L5A8MUK1 530 aa17.26■□□□□ 0.35
SCAMP4-209ENST00000585335 SMIM22K7EJ46 135 aa17.26■□□□□ 0.35
SCAMP4-209ENST00000585335 RANBP6O60518 1105 aaKnown RBP17.26■□□□□ 0.35
SCAMP4-209ENST00000585335 PRDM1O75626 825 aa17.26■□□□□ 0.35
SCAMP4-209ENST00000585335 CYP21A2P08686 494 aa17.26■□□□□ 0.35
SCAMP4-209ENST00000585335 TSPY3P0CV98 308 aa17.26■□□□□ 0.35
SCAMP4-209ENST00000585335 TSPY8P0CW00 308 aa17.26■□□□□ 0.35
SCAMP4-209ENST00000585335 RASA1P20936 1047 aa17.26■□□□□ 0.35
SCAMP4-209ENST00000585335 PPATQ06203 517 aa17.26■□□□□ 0.35
SCAMP4-209ENST00000585335 RAB3GAP1Q15042 981 aa17.26■□□□□ 0.35
SCAMP4-209ENST00000585335 PPP4R3BQ5MIZ7 849 aa17.26■□□□□ 0.35
SCAMP4-209ENST00000585335 CREB3L3Q68CJ9 461 aa17.26■□□□□ 0.35
SCAMP4-209ENST00000585335 TBC1D10CQ8IV04 446 aa17.26■□□□□ 0.35
SCAMP4-209ENST00000585335 ESR2Q92731 530 aa17.26■□□□□ 0.35
SCAMP4-209ENST00000585335 OPTNQ96CV9 577 aa17.26■□□□□ 0.35
SCAMP4-209ENST00000585335 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.26■□□□□ 0.35
SCAMP4-209ENST00000585335 TSPY2A6NKD2 308 aa17.25■□□□□ 0.35
SCAMP4-209ENST00000585335 SLC27A2O14975 620 aa17.25■□□□□ 0.35
SCAMP4-209ENST00000585335 SLC10A3P09131 477 aa17.25■□□□□ 0.35
SCAMP4-209ENST00000585335 ZBTB48P10074 688 aaPredicted RBP17.25■□□□□ 0.35
SCAMP4-209ENST00000585335 AKR1B1P15121 316 aa17.25■□□□□ 0.35
SCAMP4-209ENST00000585335 PTPRAP18433 802 aa17.25■□□□□ 0.35
SCAMP4-209ENST00000585335 NECTIN1Q15223 517 aa17.25■□□□□ 0.35
SCAMP4-209ENST00000585335 RALYLQ86SE5 291 aaKnown RBP17.25■□□□□ 0.35
SCAMP4-209ENST00000585335 RASAL3Q86YV0 1011 aa17.25■□□□□ 0.35
SCAMP4-209ENST00000585335 OTUD5Q96G74 571 aa17.25■□□□□ 0.35
SCAMP4-209ENST00000585335 WNK4Q96J92 1243 aa17.25■□□□□ 0.35
SCAMP4-209ENST00000585335 ATAD5Q96QE3 1844 aa17.24■□□□□ 0.35
SCAMP4-209ENST00000585335 FGRP09769 529 aa17.24■□□□□ 0.35
SCAMP4-209ENST00000585335 TFAP4Q01664 338 aa17.24■□□□□ 0.35
SCAMP4-209ENST00000585335 GRM1Q13255 1194 aa17.24■□□□□ 0.35
SCAMP4-209ENST00000585335 PPIL2Q13356 520 aa17.24■□□□□ 0.35
SCAMP4-209ENST00000585335 KRT32Q14532 448 aa17.24■□□□□ 0.35
SCAMP4-209ENST00000585335 RRP1BQ14684 758 aaKnown RBP17.24■□□□□ 0.35
SCAMP4-209ENST00000585335 C8orf34Q49A92 452 aa17.24■□□□□ 0.35
SCAMP4-209ENST00000585335 CAPNS2Q96L46 248 aa17.24■□□□□ 0.35
SCAMP4-209ENST00000585335 NBPF3Q9H094 633 aa17.24■□□□□ 0.35
SCAMP4-209ENST00000585335 UPF2Q9HAU5 1272 aaKnown RBP17.24■□□□□ 0.35
SCAMP4-209ENST00000585335 ZHX2Q9Y6X8 837 aa17.24■□□□□ 0.35
SCAMP4-209ENST00000585335 NOGQ13253 232 aa17.23■□□□□ 0.35
SCAMP4-209ENST00000585335 CCDC178Q5BJE1 867 aa17.23■□□□□ 0.35
SCAMP4-209ENST00000585335 SPRYD7Q5W111 196 aa17.23■□□□□ 0.35
SCAMP4-209ENST00000585335 CYP4F22Q6NT55 531 aa17.23■□□□□ 0.35
SCAMP4-209ENST00000585335 NEDD1Q8NHV4 660 aa17.23■□□□□ 0.35
SCAMP4-209ENST00000585335 NCOA7Q8NI08 942 aa17.23■□□□□ 0.35
SCAMP4-209ENST00000585335 SH2D4AQ9H788 454 aa17.23■□□□□ 0.35
SCAMP4-209ENST00000585335 KANSL2Q9H9L4 492 aa17.23■□□□□ 0.35
SCAMP4-209ENST00000585335 ARHGEF10LQ9HCE6 1279 aa17.23■□□□□ 0.35
SCAMP4-209ENST00000585335 PLIN4Q96Q06 1357 aa17.23■□□□□ 0.35
SCAMP4-209ENST00000585335 NEDD4P46934 1319 aa17.22■□□□□ 0.35
SCAMP4-209ENST00000585335 E7EWF7 191 aa17.22■□□□□ 0.35
SCAMP4-209ENST00000585335 HSPA4P34932 840 aa17.22■□□□□ 0.35
SCAMP4-209ENST00000585335 GTF2A2P52657 109 aa17.22■□□□□ 0.35
SCAMP4-209ENST00000585335 HTRA3P83110 453 aa17.22■□□□□ 0.35
SCAMP4-209ENST00000585335 ICA1Q05084 483 aa17.22■□□□□ 0.35
SCAMP4-209ENST00000585335 SNAPC2Q13487 334 aa17.22■□□□□ 0.35
SCAMP4-209ENST00000585335 SEPT2Q15019 361 aa17.22■□□□□ 0.35
SCAMP4-209ENST00000585335 FAM47AQ5JRC9 791 aa17.22■□□□□ 0.35
SCAMP4-209ENST00000585335 IQCA1Q86XH1 822 aa17.22■□□□□ 0.35
SCAMP4-209ENST00000585335 ZNF280CQ8ND82 737 aa17.22■□□□□ 0.35
SCAMP4-209ENST00000585335 FEZ1Q99689 392 aa17.22■□□□□ 0.35
SCAMP4-209ENST00000585335 WDR18Q9BV38 432 aa17.22■□□□□ 0.35
SCAMP4-209ENST00000585335 USP26Q9BXU7 913 aa17.22■□□□□ 0.35
SCAMP4-209ENST00000585335 B4E1Z4 1266 aa17.21■□□□□ 0.35
SCAMP4-209ENST00000585335 CXCL11O14625 94 aa17.21■□□□□ 0.35
SCAMP4-209ENST00000585335 MKRN3Q13064 507 aaKnown RBP17.21■□□□□ 0.35
SCAMP4-209ENST00000585335 INCENPQ9NQS7 918 aa17.21■□□□□ 0.35
SCAMP4-209ENST00000585335 MANSC4A6NHS7 340 aaPredicted RBP17.2■□□□□ 0.34
SCAMP4-209ENST00000585335 TRIM75PA6NK02 468 aa17.2■□□□□ 0.34
SCAMP4-209ENST00000585335 FAM155AB1AL88 458 aaPredicted RBP17.2■□□□□ 0.34
SCAMP4-209ENST00000585335 IRF6O14896 467 aa17.2■□□□□ 0.34
SCAMP4-209ENST00000585335 KDM4AO75164 1064 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms