RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 ZKSCAN1P17029 563 aaPredicted RBP22.43■■□□□ 1.18
TOP3A-220ENST00000585031 IRX3P78415 501 aaPredicted RBP22.43■■□□□ 1.18
TOP3A-220ENST00000585031 SPTY2D1Q68D10 685 aaPredicted RBP22.43■■□□□ 1.18
TOP3A-220ENST00000585031 ERICH6Q7L0X2 663 aa22.43■■□□□ 1.18
TOP3A-220ENST00000585031 SOCS4Q8WXH5 440 aa22.43■■□□□ 1.18
TOP3A-220ENST00000585031 DNAJC18Q9H819 358 aa22.43■■□□□ 1.18
TOP3A-220ENST00000585031 FLRT1Q9NZU1 646 aa22.43■■□□□ 1.18
TOP3A-220ENST00000585031 HMG20BQ9P0W2 317 aa22.43■■□□□ 1.18
TOP3A-220ENST00000585031 GPR142Q7Z601 462 aa22.42■■□□□ 1.18
TOP3A-220ENST00000585031 COPRSQ9NQ92 184 aa22.42■■□□□ 1.18
TOP3A-220ENST00000585031 RLFQ13129 1914 aa22.41■■□□□ 1.18
TOP3A-220ENST00000585031 A0A1B0GUL7 405 aa22.41■■□□□ 1.18
TOP3A-220ENST00000585031 UBTFL1P0CB47 393 aaPredicted RBP22.41■■□□□ 1.18
TOP3A-220ENST00000585031 ERVK-9P63128 1117 aa22.41■■□□□ 1.18
TOP3A-220ENST00000585031 ERVK-24P63145 666 aa22.41■■□□□ 1.18
TOP3A-220ENST00000585031 SH3RF3Q8TEJ3 882 aaPredicted RBP22.41■■□□□ 1.18
TOP3A-220ENST00000585031 SYMPKQ92797 1274 aaKnown RBP22.41■■□□□ 1.18
TOP3A-220ENST00000585031 SENP6Q9GZR1 1112 aaPredicted RBP22.41■■□□□ 1.18
TOP3A-220ENST00000585031 MYO5AQ9Y4I1 1855 aaKnown RBP22.41■■□□□ 1.18
TOP3A-220ENST00000585031 MAPK4P31152 587 aa22.4■■□□□ 1.18
TOP3A-220ENST00000585031 TFCP2Q12800 502 aa22.4■■□□□ 1.18
TOP3A-220ENST00000585031 AS3MTQ9HBK9 375 aa22.4■■□□□ 1.18
TOP3A-220ENST00000585031 FOCADQ5VW36 1801 aa22.39■■□□□ 1.17
TOP3A-220ENST00000585031 CNMDO75829 334 aa22.39■■□□□ 1.17
TOP3A-220ENST00000585031 COL9A1P20849 921 aa22.39■■□□□ 1.17
TOP3A-220ENST00000585031 RGS2P41220 211 aa22.39■■□□□ 1.17
TOP3A-220ENST00000585031 ATN1P54259 1190 aaPredicted RBP22.39■■□□□ 1.17
TOP3A-220ENST00000585031 PLEKHH3Q7Z736 793 aa22.39■■□□□ 1.17
TOP3A-220ENST00000585031 TEX11Q8IYF3 940 aa22.39■■□□□ 1.17
TOP3A-220ENST00000585031 PAGR1Q9BTK6 254 aa22.39■■□□□ 1.17
TOP3A-220ENST00000585031 EMILIN3Q9NT22 766 aa22.39■■□□□ 1.17
TOP3A-220ENST00000585031 HERC5Q9UII4 1024 aaKnown RBP22.39■■□□□ 1.17
TOP3A-220ENST00000585031 NDUFB9Q9Y6M9 179 aa22.39■■□□□ 1.17
TOP3A-220ENST00000585031 PDE3AQ14432 1141 aa22.38■■□□□ 1.17
TOP3A-220ENST00000585031 SHHQ15465 462 aa22.38■■□□□ 1.17
TOP3A-220ENST00000585031 C9orf50Q5SZB4 431 aa22.38■■□□□ 1.17
TOP3A-220ENST00000585031 APBA2Q99767 749 aa22.38■■□□□ 1.17
TOP3A-220ENST00000585031 TTYH1Q9H313 450 aaPredicted RBP22.38■■□□□ 1.17
TOP3A-220ENST00000585031 TMOD4Q9NZQ9 345 aa22.38■■□□□ 1.17
TOP3A-220ENST00000585031 GDF11O95390 407 aa22.37■■□□□ 1.17
TOP3A-220ENST00000585031 FAM9BQ8IZU0 186 aa22.37■■□□□ 1.17
TOP3A-220ENST00000585031 TRPV1Q8NER1 839 aa22.37■■□□□ 1.17
TOP3A-220ENST00000585031 MYLIPQ8WY64 445 aa22.37■■□□□ 1.17
TOP3A-220ENST00000585031 USP17L10C9JJH3 530 aa22.36■■□□□ 1.17
TOP3A-220ENST00000585031 MAP4K4O95819 1239 aaPredicted RBP22.36■■□□□ 1.17
TOP3A-220ENST00000585031 LDHCP07864 332 aa22.36■■□□□ 1.17
TOP3A-220ENST00000585031 METTL16Q86W50 562 aaKnown RBP22.36■■□□□ 1.17
TOP3A-220ENST00000585031 SPATA5Q8NB90 893 aa22.36■■□□□ 1.17
TOP3A-220ENST00000585031 PI4KBQ9UBF8 816 aa22.36■■□□□ 1.17
TOP3A-220ENST00000585031 C19orf81C9J6K1 198 aa22.35■■□□□ 1.17
TOP3A-220ENST00000585031 ASNSP08243 561 aa22.35■■□□□ 1.17
TOP3A-220ENST00000585031 RTP1P59025 263 aa22.35■■□□□ 1.17
TOP3A-220ENST00000585031 SMAD3P84022 425 aaKnown RBP22.35■■□□□ 1.17
TOP3A-220ENST00000585031 MAP2K5Q13163 448 aa22.35■■□□□ 1.17
TOP3A-220ENST00000585031 EDC3Q96F86 508 aaKnown RBP22.35■■□□□ 1.17
TOP3A-220ENST00000585031 MEIS3Q99687 375 aa22.35■■□□□ 1.17
TOP3A-220ENST00000585031 RAI14Q9P0K7 980 aa22.35■■□□□ 1.17
TOP3A-220ENST00000585031 IGHA2P01877 340 aa22.34■■□□□ 1.17
TOP3A-220ENST00000585031 MCAMP43121 646 aa22.34■■□□□ 1.17
TOP3A-220ENST00000585031 GSTO1P78417 241 aa22.34■■□□□ 1.17
TOP3A-220ENST00000585031 MVPQ14764 893 aaKnown RBP22.34■■□□□ 1.17
TOP3A-220ENST00000585031 NPLOC4Q8TAT6 608 aa22.34■■□□□ 1.17
TOP3A-220ENST00000585031 NEUROD6Q96NK8 337 aa22.34■■□□□ 1.17
TOP3A-220ENST00000585031 ZBTB21Q9ULJ3 1066 aa22.34■■□□□ 1.17
TOP3A-220ENST00000585031 ADGRA1Q86SQ6 560 aa22.33■■□□□ 1.17
TOP3A-220ENST00000585031 MAPKAPK5Q8IW41 473 aa22.33■■□□□ 1.17
TOP3A-220ENST00000585031 TGFBRAP1Q8WUH2 860 aa22.33■■□□□ 1.17
TOP3A-220ENST00000585031 AATFQ9NY61 560 aaKnown RBP eCLIP22.33■■□□□ 1.17
TOP3A-220ENST00000585031 PRKAG2Q9UGJ0 569 aa22.33■■□□□ 1.17
TOP3A-220ENST00000585031 DDX20Q9UHI6 824 aaKnown RBP22.33■■□□□ 1.17
TOP3A-220ENST00000585031 PALD1Q9ULE6 856 aa22.33■■□□□ 1.17
TOP3A-220ENST00000585031 ARID4AP29374 1257 aaPredicted RBP22.32■■□□□ 1.16
TOP3A-220ENST00000585031 CYP2C19P33261 490 aa22.32■■□□□ 1.16
TOP3A-220ENST00000585031 LPAR1Q92633 364 aa22.32■■□□□ 1.16
TOP3A-220ENST00000585031 GJC2Q5T442 439 aaPredicted RBP22.31■■□□□ 1.16
TOP3A-220ENST00000585031 CCAR1Q8IX12 1150 aaKnown RBP22.31■■□□□ 1.16
TOP3A-220ENST00000585031 DHX36Q9H2U1 1008 aaKnown RBP22.31■■□□□ 1.16
TOP3A-220ENST00000585031 AKAP2Q9Y2D5 859 aa22.31■■□□□ 1.16
TOP3A-220ENST00000585031 ATP11BQ9Y2G3 1177 aa22.31■■□□□ 1.16
TOP3A-220ENST00000585031 FLT1P17948 1338 aa22.31■■□□□ 1.16
TOP3A-220ENST00000585031 MYH1P12882 1939 aa22.3■■□□□ 1.16
TOP3A-220ENST00000585031 TNFRSF10AO00220 468 aa22.3■■□□□ 1.16
TOP3A-220ENST00000585031 DNM1LO00429 736 aa22.3■■□□□ 1.16
TOP3A-220ENST00000585031 FOSL2P15408 326 aa22.3■■□□□ 1.16
TOP3A-220ENST00000585031 PTPREP23469 700 aa22.3■■□□□ 1.16
TOP3A-220ENST00000585031 CNGA1P29973 690 aa22.3■■□□□ 1.16
TOP3A-220ENST00000585031 ALDH1L2Q3SY69 923 aa22.3■■□□□ 1.16
TOP3A-220ENST00000585031 TJAP1Q5JTD0 557 aa22.3■■□□□ 1.16
TOP3A-220ENST00000585031 MFSD14CQ5VZR4 134 aa22.3■■□□□ 1.16
TOP3A-220ENST00000585031 FOXP4Q8IVH2 680 aaPredicted RBP22.3■■□□□ 1.16
TOP3A-220ENST00000585031 SMC4Q9NTJ3 1288 aa22.3■■□□□ 1.16
TOP3A-220ENST00000585031 BTBD7Q9P203 1132 aa22.3■■□□□ 1.16
TOP3A-220ENST00000585031 NOB1Q9ULX3 412 aaKnown RBP22.3■■□□□ 1.16
TOP3A-220ENST00000585031 RABGAP1Q9Y3P9 1069 aa22.3■■□□□ 1.16
TOP3A-220ENST00000585031 SLC15A5A6NIM6 579 aa22.29■■□□□ 1.16
TOP3A-220ENST00000585031 MSCO60682 206 aa22.29■■□□□ 1.16
TOP3A-220ENST00000585031 PPP4CP60510 307 aa22.29■■□□□ 1.16
TOP3A-220ENST00000585031 SLFN5Q08AF3 891 aa22.29■■□□□ 1.16
TOP3A-220ENST00000585031 ZYXQ15942 572 aaKnown RBP22.29■■□□□ 1.16
TOP3A-220ENST00000585031 USP17L2Q6R6M4 530 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms