RNA–Protein interactions for RNA: ENST00000584966.1

CDH8-213, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-213ENST00000584966 IRS4O14654 1257 aaPredicted RBP7.11□□□□□ -1.27
CDH8-213ENST00000584966 IPO8O15397 1037 aaKnown RBP7.11□□□□□ -1.27
CDH8-213ENST00000584966 CSF1RP07333 972 aa7.11□□□□□ -1.27
CDH8-213ENST00000584966 EPXP11678 715 aa7.11□□□□□ -1.27
CDH8-213ENST00000584966 HOXA10P31260 410 aaPredicted RBP7.11□□□□□ -1.27
CDH8-213ENST00000584966 ST5P78524 1137 aa7.11□□□□□ -1.27
CDH8-213ENST00000584966 FOXO4P98177 505 aa7.11□□□□□ -1.27
CDH8-213ENST00000584966 CTBSQ01459 385 aa7.11□□□□□ -1.27
CDH8-213ENST00000584966 UBAP2LQ14157 1087 aaKnown RBP7.11□□□□□ -1.27
CDH8-213ENST00000584966 SF3B3Q15393 1217 aaKnown RBP7.11□□□□□ -1.27
CDH8-213ENST00000584966 EPHA10Q5JZY3 1008 aa7.11□□□□□ -1.27
CDH8-213ENST00000584966 ARTNQ5T4W7 220 aa7.11□□□□□ -1.27
CDH8-213ENST00000584966 C20orf194Q5TEA3 1177 aa7.11□□□□□ -1.27
CDH8-213ENST00000584966 C2CD5Q86YS7 1000 aa7.11□□□□□ -1.27
CDH8-213ENST00000584966 KRTAP19-1Q8IUB9 90 aa7.11□□□□□ -1.27
CDH8-213ENST00000584966 TMEM57Q8N5G2 664 aa7.11□□□□□ -1.27
CDH8-213ENST00000584966 FRAT1Q92837 279 aaPredicted RBP7.11□□□□□ -1.27
CDH8-213ENST00000584966 PLA2G12BQ9BX93 195 aa7.11□□□□□ -1.27
CDH8-213ENST00000584966 SRCIN1Q9C0H9 1055 aa7.11□□□□□ -1.27
CDH8-213ENST00000584966 PPP1R1BQ9UD71 204 aaPredicted RBP7.11□□□□□ -1.27
CDH8-213ENST00000584966 PDE8AO60658 829 aa7.1□□□□□ -1.27
CDH8-213ENST00000584966 PDE6BP35913 854 aa7.1□□□□□ -1.27
CDH8-213ENST00000584966 CCT4P50991 539 aaKnown RBP7.1□□□□□ -1.27
CDH8-213ENST00000584966 CC2D2BQ6DHV5 1058 aa7.1□□□□□ -1.27
CDH8-213ENST00000584966 UBE3BQ7Z3V4 1068 aa7.1□□□□□ -1.27
CDH8-213ENST00000584966 SLC51AQ86UW1 340 aa7.1□□□□□ -1.27
CDH8-213ENST00000584966 TTLL11Q8NHH1 800 aa7.1□□□□□ -1.27
CDH8-213ENST00000584966 PANK1Q8TE04 598 aa7.1□□□□□ -1.27
CDH8-213ENST00000584966 C7orf43Q8WVR3 580 aa7.1□□□□□ -1.27
CDH8-213ENST00000584966 ABHD17AQ96GS6 310 aa7.1□□□□□ -1.27
CDH8-213ENST00000584966 ARHGEF10LQ9HCE6 1279 aa7.1□□□□□ -1.27
CDH8-213ENST00000584966 SNED1Q8TER0 1413 aa7.1□□□□□ -1.27
CDH8-213ENST00000584966 H0YIN7 160 aa7.09□□□□□ -1.27
CDH8-213ENST00000584966 ZBTB7BO15156 539 aaPredicted RBP7.09□□□□□ -1.27
CDH8-213ENST00000584966 YBX3P16989 372 aaKnown RBP eCLIP7.09□□□□□ -1.27
CDH8-213ENST00000584966 FGFR3P22607 806 aa7.09□□□□□ -1.27
CDH8-213ENST00000584966 GTF2E1P29083 439 aaPredicted RBP7.09□□□□□ -1.27
CDH8-213ENST00000584966 ERVK-9P63128 1117 aa7.09□□□□□ -1.27
CDH8-213ENST00000584966 RABL6Q3YEC7 729 aaPredicted RBP7.09□□□□□ -1.27
CDH8-213ENST00000584966 STYK1Q6J9G0 422 aa7.09□□□□□ -1.27
CDH8-213ENST00000584966 RNF135Q8IUD6 432 aa7.09□□□□□ -1.27
CDH8-213ENST00000584966 DZIP1LQ8IYY4 767 aaKnown RBP7.09□□□□□ -1.27
CDH8-213ENST00000584966 ANKRD44Q8N8A2 993 aa7.09□□□□□ -1.27
CDH8-213ENST00000584966 PNMA1Q8ND90 353 aa7.09□□□□□ -1.27
CDH8-213ENST00000584966 MASTLQ96GX5 879 aa7.09□□□□□ -1.27
CDH8-213ENST00000584966 SUCLG2Q96I99 432 aa7.09□□□□□ -1.27
CDH8-213ENST00000584966 MEIS3Q99687 375 aa7.09□□□□□ -1.27
CDH8-213ENST00000584966 RUBCNLQ9H714 662 aa7.09□□□□□ -1.27
CDH8-213ENST00000584966 TFIP11Q9UBB9 837 aaKnown RBP7.09□□□□□ -1.27
CDH8-213ENST00000584966 ATXN7L1Q9ULK2 861 aaPredicted RBP7.09□□□□□ -1.27
CDH8-213ENST00000584966 RTL9Q8NET4 1388 aa7.08□□□□□ -1.28
CDH8-213ENST00000584966 NPR1P16066 1061 aa7.08□□□□□ -1.28
CDH8-213ENST00000584966 LMOD1P29536 600 aaPredicted RBP7.08□□□□□ -1.28
CDH8-213ENST00000584966 RRP1P56182 461 aaKnown RBP7.08□□□□□ -1.28
CDH8-213ENST00000584966 NR1H3Q13133 447 aa7.08□□□□□ -1.28
CDH8-213ENST00000584966 SEMA3FQ13275 785 aa7.08□□□□□ -1.28
CDH8-213ENST00000584966 PDE3AQ14432 1141 aa7.08□□□□□ -1.28
CDH8-213ENST00000584966 NKAPLQ5M9Q1 402 aa7.08□□□□□ -1.28
CDH8-213ENST00000584966 CYP2U1Q7Z449 544 aa7.08□□□□□ -1.28
CDH8-213ENST00000584966 CELF1Q92879 486 aaKnown RBP7.08□□□□□ -1.28
CDH8-213ENST00000584966 CRAMP1Q96RY5 1269 aa7.08□□□□□ -1.28
CDH8-213ENST00000584966 GREM2Q9H772 168 aa7.08□□□□□ -1.28
CDH8-213ENST00000584966 SEC31BQ9NQW1 1179 aa7.08□□□□□ -1.28
CDH8-213ENST00000584966 RAB6BQ9NRW1 208 aa7.08□□□□□ -1.28
CDH8-213ENST00000584966 C9orf78Q9NZ63 289 aaPredicted RBP7.08□□□□□ -1.28
CDH8-213ENST00000584966 PIM2Q9P1W9 311 aa7.08□□□□□ -1.28
CDH8-213ENST00000584966 MAFBQ9Y5Q3 323 aaPredicted RBP7.08□□□□□ -1.28
CDH8-213ENST00000584966 ZNF646O15015 1829 aaPredicted RBP7.08□□□□□ -1.28
CDH8-213ENST00000584966 PSME4Q14997 1843 aa7.07□□□□□ -1.28
CDH8-213ENST00000584966 A0A1B0GTH6 734 aa7.07□□□□□ -1.28
CDH8-213ENST00000584966 RFX5P48382 616 aaPredicted RBP7.07□□□□□ -1.28
CDH8-213ENST00000584966 CTSWP56202 376 aa7.07□□□□□ -1.28
CDH8-213ENST00000584966 MVPQ14764 893 aaKnown RBP7.07□□□□□ -1.28
CDH8-213ENST00000584966 OLFM4Q6UX06 510 aa7.07□□□□□ -1.28
CDH8-213ENST00000584966 CHSY3Q70JA7 882 aa7.07□□□□□ -1.28
CDH8-213ENST00000584966 PGBD3Q8N328 593 aa7.07□□□□□ -1.28
CDH8-213ENST00000584966 TTLL6Q8N841 843 aa7.07□□□□□ -1.28
CDH8-213ENST00000584966 ZNF622Q969S3 477 aaKnown RBP eCLIP7.07□□□□□ -1.28
CDH8-213ENST00000584966 BICC1Q9H694 974 aaKnown RBP7.07□□□□□ -1.28
CDH8-213ENST00000584966 TPSG1Q9NRR2 321 aa7.07□□□□□ -1.28
CDH8-213ENST00000584966 DUOX1Q9NRD9 1551 aa7.07□□□□□ -1.28
CDH8-213ENST00000584966 NPHP1O15259 732 aa7.06□□□□□ -1.28
CDH8-213ENST00000584966 BNIP3LO60238 219 aa7.06□□□□□ -1.28
CDH8-213ENST00000584966 BBOX1O75936 387 aa7.06□□□□□ -1.28
CDH8-213ENST00000584966 ATG7O95352 703 aa7.06□□□□□ -1.28
CDH8-213ENST00000584966 BRD1O95696 1058 aa7.06□□□□□ -1.28
CDH8-213ENST00000584966 FBXO45P0C2W1 286 aa7.06□□□□□ -1.28
CDH8-213ENST00000584966 ALDH1B1P30837 517 aa7.06□□□□□ -1.28
CDH8-213ENST00000584966 PRELPP51888 382 aa7.06□□□□□ -1.28
CDH8-213ENST00000584966 GRAPQ13588 217 aa7.06□□□□□ -1.28
CDH8-213ENST00000584966 DALRD3Q5D0E6 543 aaKnown RBP7.06□□□□□ -1.28
CDH8-213ENST00000584966 PRPF40BQ6NWY9 871 aaKnown RBP7.06□□□□□ -1.28
CDH8-213ENST00000584966 LMBR1LQ6UX01 489 aa7.06□□□□□ -1.28
CDH8-213ENST00000584966 TBC1D9Q6ZT07 1266 aa7.06□□□□□ -1.28
CDH8-213ENST00000584966 GRAPLQ8TC17 118 aaPredicted RBP7.06□□□□□ -1.28
CDH8-213ENST00000584966 CNKSR1Q969H4 720 aa7.06□□□□□ -1.28
CDH8-213ENST00000584966 RBM17Q96I25 401 aaKnown RBP7.06□□□□□ -1.28
CDH8-213ENST00000584966 CCDC85AQ96PX6 553 aaPredicted RBP7.06□□□□□ -1.28
CDH8-213ENST00000584966 GOLGA2P5Q9HBQ8 144 aa7.06□□□□□ -1.28
CDH8-213ENST00000584966 ZBTB40Q9NUA8 1239 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms