RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 TMEM39AQ9NV64 488 aa2.76□□□□□ -1.97
SMCHD1-211ENST00000584897 LMCD1Q9NZU5 365 aa2.76□□□□□ -1.97
SMCHD1-211ENST00000584897 PZPP20742 1482 aa2.76□□□□□ -1.97
SMCHD1-211ENST00000584897 PRDM15P57071 1507 aaPredicted RBP2.76□□□□□ -1.97
SMCHD1-211ENST00000584897 CASZ1Q86V15 1759 aa2.76□□□□□ -1.97
SMCHD1-211ENST00000584897 BRWD3Q6RI45 1802 aa2.76□□□□□ -1.97
SMCHD1-211ENST00000584897 SHANK3Q9BYB0 1731 aa2.76□□□□□ -1.97
SMCHD1-211ENST00000584897 ATRNO75882 1429 aa2.76□□□□□ -1.97
SMCHD1-211ENST00000584897 CASKIN1Q8WXD9 1431 aa2.76□□□□□ -1.97
SMCHD1-211ENST00000584897 FAM155AB1AL88 458 aaPredicted RBP2.76□□□□□ -1.97
SMCHD1-211ENST00000584897 CDC25BP30305 580 aa2.76□□□□□ -1.97
SMCHD1-211ENST00000584897 GSTT1P30711 240 aa2.76□□□□□ -1.97
SMCHD1-211ENST00000584897 PRELPP51888 382 aa2.76□□□□□ -1.97
SMCHD1-211ENST00000584897 PDE4BQ07343 736 aa2.76□□□□□ -1.97
SMCHD1-211ENST00000584897 PLCL1Q15111 1095 aa2.76□□□□□ -1.97
SMCHD1-211ENST00000584897 SHISA2Q6UWI4 295 aa2.76□□□□□ -1.97
SMCHD1-211ENST00000584897 ARMC5Q96C12 935 aa2.76□□□□□ -1.97
SMCHD1-211ENST00000584897 KLHDC7BQ96G42 594 aa2.76□□□□□ -1.97
SMCHD1-211ENST00000584897 C8orf37Q96NL8 207 aa2.76□□□□□ -1.97
SMCHD1-211ENST00000584897 POLIQ9UNA4 740 aa2.76□□□□□ -1.97
SMCHD1-211ENST00000584897 EHBP1L1Q8N3D4 1523 aa2.75□□□□□ -1.97
SMCHD1-211ENST00000584897 ZBTB42B2RXF5 422 aa2.75□□□□□ -1.97
SMCHD1-211ENST00000584897 ICMTO60725 284 aa2.75□□□□□ -1.97
SMCHD1-211ENST00000584897 ETV3P41162 512 aa2.75□□□□□ -1.97
SMCHD1-211ENST00000584897 IFI16Q16666 785 aaKnown RBP2.75□□□□□ -1.97
SMCHD1-211ENST00000584897 TRIM42Q8IWZ5 723 aa2.75□□□□□ -1.97
SMCHD1-211ENST00000584897 TMEM40Q8WWA1 233 aa2.75□□□□□ -1.97
SMCHD1-211ENST00000584897 HRASLS5Q96KN8 279 aa2.75□□□□□ -1.97
SMCHD1-211ENST00000584897 TRIT1Q9H3H1 467 aaKnown RBP2.75□□□□□ -1.97
SMCHD1-211ENST00000584897 CDC42BPBQ9Y5S2 1711 aa2.75□□□□□ -1.97
SMCHD1-211ENST00000584897 SOWAHDA6NJG2 315 aa2.75□□□□□ -1.97
SMCHD1-211ENST00000584897 PRNPP04156 253 aa2.75□□□□□ -1.97
SMCHD1-211ENST00000584897 TAL1P17542 331 aaPredicted RBP2.75□□□□□ -1.97
SMCHD1-211ENST00000584897 KIAA1211Q6ZU35 1233 aa2.75□□□□□ -1.97
SMCHD1-211ENST00000584897 ZAR1Q86SH2 424 aa2.75□□□□□ -1.97
SMCHD1-211ENST00000584897 SH2B1Q9NRF2 756 aaPredicted RBP2.75□□□□□ -1.97
SMCHD1-211ENST00000584897 KCNH3Q9ULD8 1083 aa2.75□□□□□ -1.97
SMCHD1-211ENST00000584897 NUP188Q5SRE5 1749 aa2.75□□□□□ -1.97
SMCHD1-211ENST00000584897 SETD5Q9C0A6 1442 aa2.75□□□□□ -1.97
SMCHD1-211ENST00000584897 ZMYM3Q14202 1370 aa2.75□□□□□ -1.97
SMCHD1-211ENST00000584897 TMEM62Q0P6H9 643 aa2.75□□□□□ -1.97
SMCHD1-211ENST00000584897 COL9A3Q14050 684 aaPredicted RBP2.75□□□□□ -1.97
SMCHD1-211ENST00000584897 PHF6Q8IWS0 365 aaKnown RBP eCLIP2.75□□□□□ -1.97
SMCHD1-211ENST00000584897 ETFBKMTQ8IXQ9 262 aa2.75□□□□□ -1.97
SMCHD1-211ENST00000584897 ELMO3Q96BJ8 720 aa2.75□□□□□ -1.97
SMCHD1-211ENST00000584897 POP1Q99575 1024 aaKnown RBP2.75□□□□□ -1.97
SMCHD1-211ENST00000584897 BCS1LQ9Y276 419 aa2.75□□□□□ -1.97
SMCHD1-211ENST00000584897 CHD2O14647 1828 aaKnown RBP2.75□□□□□ -1.97
SMCHD1-211ENST00000584897 TET3O43151 1660 aa2.75□□□□□ -1.97
SMCHD1-211ENST00000584897 USP32Q8NFA0 1604 aa2.75□□□□□ -1.97
SMCHD1-211ENST00000584897 TMEM238LA0A1B0GVL6 79 aa2.74□□□□□ -1.97
SMCHD1-211ENST00000584897 TNFRSF21O75509 655 aa2.74□□□□□ -1.97
SMCHD1-211ENST00000584897 ESRRAP11474 423 aaPredicted RBP2.74□□□□□ -1.97
SMCHD1-211ENST00000584897 MPSTP25325 297 aa2.74□□□□□ -1.97
SMCHD1-211ENST00000584897 PRKCQQ04759 706 aa2.74□□□□□ -1.97
SMCHD1-211ENST00000584897 PWP1Q13610 501 aa2.74□□□□□ -1.97
SMCHD1-211ENST00000584897 CAPN12Q6ZSI9 719 aa2.74□□□□□ -1.97
SMCHD1-211ENST00000584897 HDXQ7Z353 690 aa2.74□□□□□ -1.97
SMCHD1-211ENST00000584897 FBXL6Q8N531 539 aa2.74□□□□□ -1.97
SMCHD1-211ENST00000584897 FMNL2Q96PY5 1086 aa2.74□□□□□ -1.97
SMCHD1-211ENST00000584897 FOXQ1Q9C009 403 aa2.74□□□□□ -1.97
SMCHD1-211ENST00000584897 NAGPAQ9UK23 515 aa2.74□□□□□ -1.97
SMCHD1-211ENST00000584897 RAB6AP20340 208 aa2.74□□□□□ -1.97
SMCHD1-211ENST00000584897 PRPF40BQ6NWY9 871 aaKnown RBP2.74□□□□□ -1.97
SMCHD1-211ENST00000584897 OGFOD3Q6PK18 319 aa2.74□□□□□ -1.97
SMCHD1-211ENST00000584897 POLR3GLQ9BT43 218 aa2.74□□□□□ -1.97
SMCHD1-211ENST00000584897 CARD10Q9BWT7 1032 aa2.74□□□□□ -1.97
SMCHD1-211ENST00000584897 CYP8B1Q9UNU6 501 aa2.74□□□□□ -1.97
SMCHD1-211ENST00000584897 NUP153P49790 1475 aaKnown RBP2.74□□□□□ -1.97
SMCHD1-211ENST00000584897 SCAPERQ9BY12 1400 aa2.74□□□□□ -1.97
SMCHD1-211ENST00000584897 IGF2BP3O00425 579 aaKnown RBP eCLIP2.74□□□□□ -1.97
SMCHD1-211ENST00000584897 DEAF1O75398 565 aaPredicted RBP2.74□□□□□ -1.97
SMCHD1-211ENST00000584897 TMEM151BQ8IW70 566 aa2.74□□□□□ -1.97
SMCHD1-211ENST00000584897 GIPC2Q8TF65 315 aa2.74□□□□□ -1.97
SMCHD1-211ENST00000584897 CSRNP1Q96S65 589 aa2.74□□□□□ -1.97
SMCHD1-211ENST00000584897 TMPRSS13Q9BYE2 586 aa2.74□□□□□ -1.97
SMCHD1-211ENST00000584897 CBX8Q9HC52 389 aa2.74□□□□□ -1.97
SMCHD1-211ENST00000584897 ADGRB2O60241 1585 aa2.74□□□□□ -1.97
SMCHD1-211ENST00000584897 AATKQ6ZMQ8 1374 aa2.74□□□□□ -1.97
SMCHD1-211ENST00000584897 SSU72P8A0A1W2PR75 194 aa2.74□□□□□ -1.97
SMCHD1-211ENST00000584897 TNFRSF10BO14763 440 aa2.74□□□□□ -1.97
SMCHD1-211ENST00000584897 RECKO95980 971 aa2.74□□□□□ -1.97
SMCHD1-211ENST00000584897 ARNTP27540 789 aa2.74□□□□□ -1.97
SMCHD1-211ENST00000584897 CLCN7P51798 805 aa2.74□□□□□ -1.97
SMCHD1-211ENST00000584897 RBM6P78332 1123 aaKnown RBP2.74□□□□□ -1.97
SMCHD1-211ENST00000584897 ATP11AP98196 1134 aa2.74□□□□□ -1.97
SMCHD1-211ENST00000584897 ZDHHC13Q8IUH4 622 aa2.74□□□□□ -1.97
SMCHD1-211ENST00000584897 CCNJLQ8IV13 435 aa2.74□□□□□ -1.97
SMCHD1-211ENST00000584897 C1orf127Q8N9H9 656 aa2.74□□□□□ -1.97
SMCHD1-211ENST00000584897 EZH1Q92800 747 aaPredicted RBP2.74□□□□□ -1.97
SMCHD1-211ENST00000584897 KCNB2Q92953 911 aa2.74□□□□□ -1.97
SMCHD1-211ENST00000584897 MFSD14AQ96MC6 490 aa2.74□□□□□ -1.97
SMCHD1-211ENST00000584897 BRINP2Q9C0B6 783 aa2.74□□□□□ -1.97
SMCHD1-211ENST00000584897 DCTN4Q9UJW0 460 aa2.74□□□□□ -1.97
SMCHD1-211ENST00000584897 LRFN2Q9ULH4 789 aa2.74□□□□□ -1.97
SMCHD1-211ENST00000584897 MIA2Q96PC5 1412 aa2.74□□□□□ -1.97
SMCHD1-211ENST00000584897 KIAA1107Q9UPP5 1409 aa2.74□□□□□ -1.97
SMCHD1-211ENST00000584897 RFXAPO00287 272 aa2.73□□□□□ -1.97
SMCHD1-211ENST00000584897 NFIBO00712 420 aa2.73□□□□□ -1.97
SMCHD1-211ENST00000584897 TMEM253P0C7T8 217 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms