RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 RNF34Q969K3 372 aa6.55□□□□□ -1.36
PPP4R1-227ENST00000583988 MIR1-1HGQ9H1L0 117 aa6.55□□□□□ -1.36
PPP4R1-227ENST00000583988 COPRSQ9NQ92 184 aa6.55□□□□□ -1.36
PPP4R1-227ENST00000583988 KBTBD4Q9NVX7 518 aa6.55□□□□□ -1.36
PPP4R1-227ENST00000583988 GGT7Q9UJ14 662 aa6.55□□□□□ -1.36
PPP4R1-227ENST00000583988 GNAT3A8MTJ3 354 aa6.54□□□□□ -1.36
PPP4R1-227ENST00000583988 LRIG2O94898 1065 aa6.54□□□□□ -1.36
PPP4R1-227ENST00000583988 GBP2P32456 591 aaPredicted RBP6.54□□□□□ -1.36
PPP4R1-227ENST00000583988 LMNB2Q03252 620 aa6.54□□□□□ -1.36
PPP4R1-227ENST00000583988 CAMK2GQ13555 558 aaPredicted RBP6.54□□□□□ -1.36
PPP4R1-227ENST00000583988 NKG7Q16617 165 aa6.54□□□□□ -1.36
PPP4R1-227ENST00000583988 FAM214BQ7L5A3 538 aa6.54□□□□□ -1.36
PPP4R1-227ENST00000583988 RHOVQ96L33 236 aa6.54□□□□□ -1.36
PPP4R1-227ENST00000583988 FMNL2Q96PY5 1086 aa6.54□□□□□ -1.36
PPP4R1-227ENST00000583988 WNT10AQ9GZT5 417 aa6.54□□□□□ -1.36
PPP4R1-227ENST00000583988 PRDM5Q9NQX1 630 aaPredicted RBP6.54□□□□□ -1.36
PPP4R1-227ENST00000583988 SNCAIPQ9Y6H5 919 aa6.54□□□□□ -1.36
PPP4R1-227ENST00000583988 MINDY4BA8MYZ0 360 aa6.53□□□□□ -1.36
PPP4R1-227ENST00000583988 F6X3S4 739 aa6.53□□□□□ -1.36
PPP4R1-227ENST00000583988 SLITRK5O94991 958 aa6.53□□□□□ -1.36
PPP4R1-227ENST00000583988 EOMESO95936 686 aa6.53□□□□□ -1.36
PPP4R1-227ENST00000583988 PF4P02776 101 aa6.53□□□□□ -1.36
PPP4R1-227ENST00000583988 FUT4P22083 530 aa6.53□□□□□ -1.36
PPP4R1-227ENST00000583988 GRK4P32298 578 aa6.53□□□□□ -1.36
PPP4R1-227ENST00000583988 SLBPQ14493 270 aaKnown RBP eCLIP6.53□□□□□ -1.36
PPP4R1-227ENST00000583988 PI4K2BQ8TCG2 481 aa6.53□□□□□ -1.36
PPP4R1-227ENST00000583988 MIPEPQ99797 713 aa6.53□□□□□ -1.36
PPP4R1-227ENST00000583988 KRTAP4-12Q9BQ66 201 aa6.53□□□□□ -1.36
PPP4R1-227ENST00000583988 FOXQ1Q9C009 403 aa6.53□□□□□ -1.36
PPP4R1-227ENST00000583988 KCNQ5Q9NR82 932 aa6.53□□□□□ -1.36
PPP4R1-227ENST00000583988 TPX2Q9ULW0 747 aaKnown RBP6.53□□□□□ -1.36
PPP4R1-227ENST00000583988 IGF2BP3O00425 579 aaKnown RBP eCLIP6.52□□□□□ -1.37
PPP4R1-227ENST00000583988 GFRA2O00451 464 aa6.52□□□□□ -1.37
PPP4R1-227ENST00000583988 TCF3P15923 654 aa6.52□□□□□ -1.37
PPP4R1-227ENST00000583988 METTL16Q86W50 562 aaKnown RBP6.52□□□□□ -1.37
PPP4R1-227ENST00000583988 SPACA3Q8IXA5 215 aa6.52□□□□□ -1.37
PPP4R1-227ENST00000583988 XAGE3Q8WTP9 111 aa6.52□□□□□ -1.37
PPP4R1-227ENST00000583988 JARID2Q92833 1246 aaPredicted RBP6.52□□□□□ -1.37
PPP4R1-227ENST00000583988 ASIC4Q96FT7 647 aa6.52□□□□□ -1.37
PPP4R1-227ENST00000583988 TNKS2Q9H2K2 1166 aa6.52□□□□□ -1.37
PPP4R1-227ENST00000583988 RC3H2Q9HBD1 1191 aaKnown RBP6.52□□□□□ -1.37
PPP4R1-227ENST00000583988 GOLGA2P5Q9HBQ8 144 aa6.52□□□□□ -1.37
PPP4R1-227ENST00000583988 ADAMTS6Q9UKP5 1117 aa6.52□□□□□ -1.37
PPP4R1-227ENST00000583988 FAM221AA4D161 298 aa6.51□□□□□ -1.37
PPP4R1-227ENST00000583988 GREM1O60565 184 aa6.51□□□□□ -1.37
PPP4R1-227ENST00000583988 RNASE1P07998 156 aaKnown RBP6.51□□□□□ -1.37
PPP4R1-227ENST00000583988 ITGB5P18084 799 aa6.51□□□□□ -1.37
PPP4R1-227ENST00000583988 GARTP22102 1010 aa6.51□□□□□ -1.37
PPP4R1-227ENST00000583988 EIF4A3P38919 411 aaKnown RBP6.51□□□□□ -1.37
PPP4R1-227ENST00000583988 IKZF1Q13422 519 aa6.51□□□□□ -1.37
PPP4R1-227ENST00000583988 NKPD1Q17RQ9 610 aa6.51□□□□□ -1.37
PPP4R1-227ENST00000583988 ANGEL2Q5VTE6 544 aaKnown RBP6.51□□□□□ -1.37
PPP4R1-227ENST00000583988 PRAMEF13Q5VWM6 474 aa6.51□□□□□ -1.37
PPP4R1-227ENST00000583988 FBXL19Q6PCT2 694 aa6.51□□□□□ -1.37
PPP4R1-227ENST00000583988 HID1Q8IV36 788 aa6.51□□□□□ -1.37
PPP4R1-227ENST00000583988 GATAD2BQ8WXI9 593 aa6.51□□□□□ -1.37
PPP4R1-227ENST00000583988 PRDM7Q9NQW5 492 aa6.51□□□□□ -1.37
PPP4R1-227ENST00000583988 MBNL3Q9NUK0 354 aaKnown RBP6.51□□□□□ -1.37
PPP4R1-227ENST00000583988 SNX11Q9Y5W9 270 aa6.51□□□□□ -1.37
PPP4R1-227ENST00000583988 ROBO2Q9HCK4 1378 aa6.5□□□□□ -1.37
PPP4R1-227ENST00000583988 FAM155AB1AL88 458 aaPredicted RBP6.5□□□□□ -1.37
PPP4R1-227ENST00000583988 CILPO75339 1184 aa6.5□□□□□ -1.37
PPP4R1-227ENST00000583988 JUNBP17275 347 aaPredicted RBP6.5□□□□□ -1.37
PPP4R1-227ENST00000583988 HDLBPQ00341 1268 aaKnown RBP6.5□□□□□ -1.37
PPP4R1-227ENST00000583988 RPL6Q02878 288 aaKnown RBP6.5□□□□□ -1.37
PPP4R1-227ENST00000583988 DIEXFQ68CQ4 756 aaKnown RBP6.5□□□□□ -1.37
PPP4R1-227ENST00000583988 LETMD1Q6P1Q0 360 aa6.5□□□□□ -1.37
PPP4R1-227ENST00000583988 BNC2Q6ZN30 1099 aaPredicted RBP6.5□□□□□ -1.37
PPP4R1-227ENST00000583988 MFSD2AQ8NA29 543 aa6.5□□□□□ -1.37
PPP4R1-227ENST00000583988 GOLM1Q8NBJ4 401 aa6.5□□□□□ -1.37
PPP4R1-227ENST00000583988 RIN3Q8TB24 985 aa6.5□□□□□ -1.37
PPP4R1-227ENST00000583988 ZNF296Q8WUU4 475 aaPredicted RBP6.5□□□□□ -1.37
PPP4R1-227ENST00000583988 ASB11Q8WXH4 323 aa6.5□□□□□ -1.37
PPP4R1-227ENST00000583988 DPH2Q9BQC3 489 aaPredicted RBP6.5□□□□□ -1.37
PPP4R1-227ENST00000583988 DDX41Q9UJV9 622 aaKnown RBP6.5□□□□□ -1.37
PPP4R1-227ENST00000583988 MAPK8IP1Q9UQF2 711 aa6.5□□□□□ -1.37
PPP4R1-227ENST00000583988 TACC3Q9Y6A5 838 aa6.5□□□□□ -1.37
PPP4R1-227ENST00000583988 CNTNAP4Q9C0A0 1308 aa6.5□□□□□ -1.37
PPP4R1-227ENST00000583988 PRR33A8MZF0 331 aa6.49□□□□□ -1.37
PPP4R1-227ENST00000583988 BIN1O00499 593 aa6.49□□□□□ -1.37
PPP4R1-227ENST00000583988 PAPLNO95428 1278 aa6.49□□□□□ -1.37
PPP4R1-227ENST00000583988 F13A1P00488 732 aa6.49□□□□□ -1.37
PPP4R1-227ENST00000583988 PGRP06401 933 aa6.49□□□□□ -1.37
PPP4R1-227ENST00000583988 FAM160A1Q05DH4 1040 aa6.49□□□□□ -1.37
PPP4R1-227ENST00000583988 CDKAL1Q5VV42 579 aa6.49□□□□□ -1.37
PPP4R1-227ENST00000583988 USP48Q86UV5 1035 aa6.49□□□□□ -1.37
PPP4R1-227ENST00000583988 ADAMTS1Q9UHI8 967 aa6.49□□□□□ -1.37
PPP4R1-227ENST00000583988 CBX7O95931 251 aa6.48□□□□□ -1.37
PPP4R1-227ENST00000583988 CST3P01034 146 aaPredicted RBP6.48□□□□□ -1.37
PPP4R1-227ENST00000583988 CAP2P40123 477 aa6.48□□□□□ -1.37
PPP4R1-227ENST00000583988 RACK1P63244 317 aaKnown RBP6.48□□□□□ -1.37
PPP4R1-227ENST00000583988 ZP2Q05996 745 aa6.48□□□□□ -1.37
PPP4R1-227ENST00000583988 ZNF394Q53GI3 561 aa6.48□□□□□ -1.37
PPP4R1-227ENST00000583988 SNAP47Q5SQN1 464 aa6.48□□□□□ -1.37
PPP4R1-227ENST00000583988 SFRP5Q5T4F7 317 aa6.48□□□□□ -1.37
PPP4R1-227ENST00000583988 FAM196AQ6ZSG2 479 aa6.48□□□□□ -1.37
PPP4R1-227ENST00000583988 KRTAP19-1Q8IUB9 90 aa6.48□□□□□ -1.37
PPP4R1-227ENST00000583988 LRRN4CLQ8ND94 238 aa6.48□□□□□ -1.37
PPP4R1-227ENST00000583988 HSPA12BQ96MM6 686 aa6.48□□□□□ -1.37
PPP4R1-227ENST00000583988 TGIF2Q9GZN2 237 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms