RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 SGPL1O95470 568 aa19.13■□□□□ 0.65
SKA2-209ENST00000583976 SH3D19Q5HYK7 790 aa19.13■□□□□ 0.65
SKA2-209ENST00000583976 DIS3LQ8TF46 1054 aaKnown RBP19.13■□□□□ 0.65
SKA2-209ENST00000583976 COA7Q96BR5 231 aa19.13■□□□□ 0.65
SKA2-209ENST00000583976 CRBNQ96SW2 442 aa19.13■□□□□ 0.65
SKA2-209ENST00000583976 ZBTB40Q9NUA8 1239 aa19.13■□□□□ 0.65
SKA2-209ENST00000583976 PI4KBQ9UBF8 816 aa19.13■□□□□ 0.65
SKA2-209ENST00000583976 PALD1Q9ULE6 856 aa19.13■□□□□ 0.65
SKA2-209ENST00000583976 ATP8B2P98198 1209 aa19.12■□□□□ 0.65
SKA2-209ENST00000583976 CCDC158Q5M9N0 1113 aa19.12■□□□□ 0.65
SKA2-209ENST00000583976 HTATIP2Q9BUP3 242 aa19.12■□□□□ 0.65
SKA2-209ENST00000583976 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.12■□□□□ 0.65
SKA2-209ENST00000583976 CCDC8Q9H0W5 538 aaPredicted RBP19.12■□□□□ 0.65
SKA2-209ENST00000583976 CHMP4BQ9H444 224 aaKnown RBP19.12■□□□□ 0.65
SKA2-209ENST00000583976 ZBTB21Q9ULJ3 1066 aa19.12■□□□□ 0.65
SKA2-209ENST00000583976 BAG3O95817 575 aa19.11■□□□□ 0.65
SKA2-209ENST00000583976 GCLCP48506 637 aaPredicted RBP19.11■□□□□ 0.65
SKA2-209ENST00000583976 PPP4CP60510 307 aa19.11■□□□□ 0.65
SKA2-209ENST00000583976 CRACR2BQ8N4Y2 399 aaPredicted RBP19.11■□□□□ 0.65
SKA2-209ENST00000583976 MIGA1Q8NAN2 632 aa19.11■□□□□ 0.65
SKA2-209ENST00000583976 EAF2Q96CJ1 260 aaPredicted RBP19.11■□□□□ 0.65
SKA2-209ENST00000583976 TBC1D2Q9BYX2 928 aa19.11■□□□□ 0.65
SKA2-209ENST00000583976 DHX36Q9H2U1 1008 aaKnown RBP19.11■□□□□ 0.65
SKA2-209ENST00000583976 AS3MTQ9HBK9 375 aa19.11■□□□□ 0.65
SKA2-209ENST00000583976 TXNRD2Q9NNW7 524 aa19.11■□□□□ 0.65
SKA2-209ENST00000583976 ASNSP08243 561 aa19.1■□□□□ 0.65
SKA2-209ENST00000583976 PLCG2P16885 1265 aa19.1■□□□□ 0.65
SKA2-209ENST00000583976 IRX3P78415 501 aaPredicted RBP19.1■□□□□ 0.65
SKA2-209ENST00000583976 WDR18Q9BV38 432 aa19.1■□□□□ 0.65
SKA2-209ENST00000583976 PRO3102Q9H379 93 aa19.1■□□□□ 0.65
SKA2-209ENST00000583976 IDH1O75874 414 aaKnown RBP19.09■□□□□ 0.65
SKA2-209ENST00000583976 TFRCP02786 760 aaKnown RBP19.09■□□□□ 0.65
SKA2-209ENST00000583976 HMGCRP04035 888 aa19.09■□□□□ 0.65
SKA2-209ENST00000583976 CYP7A1P22680 504 aa19.09■□□□□ 0.65
SKA2-209ENST00000583976 BACE1P56817 501 aa19.09■□□□□ 0.65
SKA2-209ENST00000583976 PABPC4Q13310 644 aaKnown RBP eCLIP19.09■□□□□ 0.65
SKA2-209ENST00000583976 CEP85Q6P2H3 762 aa19.09■□□□□ 0.65
SKA2-209ENST00000583976 METTL16Q86W50 562 aaKnown RBP19.09■□□□□ 0.65
SKA2-209ENST00000583976 TRIB2Q92519 343 aa19.09■□□□□ 0.65
SKA2-209ENST00000583976 ZNF512BQ96KM6 892 aaPredicted RBP19.09■□□□□ 0.65
SKA2-209ENST00000583976 CRISPLD2Q9H0B8 497 aa19.09■□□□□ 0.65
SKA2-209ENST00000583976 ANTXR1Q9H6X2 564 aa19.09■□□□□ 0.65
SKA2-209ENST00000583976 MORF4L1Q9UBU8 362 aa19.09■□□□□ 0.65
SKA2-209ENST00000583976 GJD2Q9UKL4 321 aa19.09■□□□□ 0.65
SKA2-209ENST00000583976 NOP58Q9Y2X3 529 aaKnown RBP19.09■□□□□ 0.65
SKA2-209ENST00000583976 IRX6P78412 446 aaPredicted RBP19.08■□□□□ 0.64
SKA2-209ENST00000583976 POTEEQ6S8J3 1075 aa19.08■□□□□ 0.64
SKA2-209ENST00000583976 PAWRQ96IZ0 340 aaKnown RBP19.08■□□□□ 0.64
SKA2-209ENST00000583976 TRIM34Q9BYJ4 488 aa19.08■□□□□ 0.64
SKA2-209ENST00000583976 TMOD4Q9NZQ9 345 aa19.08■□□□□ 0.64
SKA2-209ENST00000583976 EXOC6BQ9Y2D4 811 aa19.08■□□□□ 0.64
SKA2-209ENST00000583976 FRMPD3Q5JV73 1810 aa19.07■□□□□ 0.64
SKA2-209ENST00000583976 HERVK_113P62684 666 aa19.07■□□□□ 0.64
SKA2-209ENST00000583976 ZYXQ15942 572 aaKnown RBP19.07■□□□□ 0.64
SKA2-209ENST00000583976 MAGEB6Q8N7X4 407 aa19.07■□□□□ 0.64
SKA2-209ENST00000583976 P2RX7Q99572 595 aaKnown RBP19.07■□□□□ 0.64
SKA2-209ENST00000583976 GH2P01242 217 aa19.06■□□□□ 0.64
SKA2-209ENST00000583976 CYP2B6P20813 491 aa19.06■□□□□ 0.64
SKA2-209ENST00000583976 PORCNQ9H237 461 aa19.06■□□□□ 0.64
SKA2-209ENST00000583976 EVI5O60447 810 aa19.05■□□□□ 0.64
SKA2-209ENST00000583976 HLA-DOAP06340 250 aa19.05■□□□□ 0.64
SKA2-209ENST00000583976 HOXA7P31268 230 aaPredicted RBP19.05■□□□□ 0.64
SKA2-209ENST00000583976 EVX2Q03828 476 aa19.05■□□□□ 0.64
SKA2-209ENST00000583976 PAGR1Q9BTK6 254 aa19.05■□□□□ 0.64
SKA2-209ENST00000583976 EMILIN3Q9NT22 766 aa19.05■□□□□ 0.64
SKA2-209ENST00000583976 NR2E3Q9Y5X4 410 aa19.05■□□□□ 0.64
SKA2-209ENST00000583976 USP17L10C9JJH3 530 aa19.04■□□□□ 0.64
SKA2-209ENST00000583976 PRKAR2AP13861 404 aaKnown RBP19.04■□□□□ 0.64
SKA2-209ENST00000583976 USP5P45974 858 aa19.04■□□□□ 0.64
SKA2-209ENST00000583976 MNX1P50219 401 aaPredicted RBP19.04■□□□□ 0.64
SKA2-209ENST00000583976 AACSQ86V21 672 aa19.04■□□□□ 0.64
SKA2-209ENST00000583976 FOXP4Q8IVH2 680 aaPredicted RBP19.04■□□□□ 0.64
SKA2-209ENST00000583976 SIRT2Q8IXJ6 389 aa19.04■□□□□ 0.64
SKA2-209ENST00000583976 RPAP2Q8IXW5 612 aaPredicted RBP19.04■□□□□ 0.64
SKA2-209ENST00000583976 IL1RAPL2Q9NP60 686 aa19.04■□□□□ 0.64
SKA2-209ENST00000583976 C7orf61Q8IZ16 206 aa19.03■□□□□ 0.64
SKA2-209ENST00000583976 EXOC6Q8TAG9 804 aa19.03■□□□□ 0.64
SKA2-209ENST00000583976 FEZ1Q99689 392 aa19.03■□□□□ 0.64
SKA2-209ENST00000583976 RBPJLQ9UBG7 517 aa19.03■□□□□ 0.64
SKA2-209ENST00000583976 COL6A3P12111 3177 aa19.03■□□□□ 0.64
SKA2-209ENST00000583976 RPTORQ8N122 1335 aa19.02■□□□□ 0.64
SKA2-209ENST00000583976 C19orf81C9J6K1 198 aa19.02■□□□□ 0.64
SKA2-209ENST00000583976 SOX1O00570 391 aaPredicted RBP19.02■□□□□ 0.64
SKA2-209ENST00000583976 CENPBP07199 599 aaPredicted RBP19.02■□□□□ 0.64
SKA2-209ENST00000583976 ERVK-9P63128 1117 aa19.02■□□□□ 0.64
SKA2-209ENST00000583976 ERVK-24P63145 666 aa19.02■□□□□ 0.64
SKA2-209ENST00000583976 CCL14Q16627 93 aa19.02■□□□□ 0.64
SKA2-209ENST00000583976 Q3C1V9 767 aa19.02■□□□□ 0.64
SKA2-209ENST00000583976 MAP3K21Q5TCX8 1036 aa19.02■□□□□ 0.64
SKA2-209ENST00000583976 NECAB2Q7Z6G3 386 aa19.02■□□□□ 0.64
SKA2-209ENST00000583976 GPRC5AQ8NFJ5 357 aa19.02■□□□□ 0.64
SKA2-209ENST00000583976 SOCS4Q8WXH5 440 aa19.02■□□□□ 0.64
SKA2-209ENST00000583976 RIOK1Q9BRS2 568 aaKnown RBP19.02■□□□□ 0.64
SKA2-209ENST00000583976 HMX1Q9NP08 348 aaPredicted RBP19.02■□□□□ 0.64
SKA2-209ENST00000583976 ZMYND8Q9ULU4 1186 aaPredicted RBP19.02■□□□□ 0.64
SKA2-209ENST00000583976 A0A0G2JMZ2 1700 aa19.01■□□□□ 0.63
SKA2-209ENST00000583976 CNMDO75829 334 aa19.01■□□□□ 0.63
SKA2-209ENST00000583976 TATDN1Q6P1N9 297 aa19.01■□□□□ 0.63
SKA2-209ENST00000583976 ACER1Q8TDN7 264 aa19.01■□□□□ 0.63
SKA2-209ENST00000583976 STAP2Q9UGK3 403 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms