RNA–Protein interactions for RNA: ENST00000583577.1

MKS1-212, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-212ENST00000583577 PDE8BO95263 885 aa11.82□□□□□ -0.52
MKS1-212ENST00000583577 HSP90AA1P07900 732 aaKnown RBP11.82□□□□□ -0.52
MKS1-212ENST00000583577 CLCN1P35523 988 aa11.82□□□□□ -0.52
MKS1-212ENST00000583577 POLA2Q14181 598 aa11.82□□□□□ -0.52
MKS1-212ENST00000583577 SHHQ15465 462 aa11.82□□□□□ -0.52
MKS1-212ENST00000583577 MFSD14BQ5SR56 506 aa11.82□□□□□ -0.52
MKS1-212ENST00000583577 TTC22Q5TAA0 569 aa11.82□□□□□ -0.52
MKS1-212ENST00000583577 CEP85Q6P2H3 762 aa11.82□□□□□ -0.52
MKS1-212ENST00000583577 ATG9AQ7Z3C6 839 aa11.82□□□□□ -0.52
MKS1-212ENST00000583577 HOOK2Q96ED9 719 aa11.82□□□□□ -0.52
MKS1-212ENST00000583577 UHRF1Q96T88 793 aaPredicted RBP11.82□□□□□ -0.52
MKS1-212ENST00000583577 CEP126Q9P2H0 1117 aa11.82□□□□□ -0.52
MKS1-212ENST00000583577 HCN4Q9Y3Q4 1203 aa11.82□□□□□ -0.52
MKS1-212ENST00000583577 FRMPD3Q5JV73 1810 aa11.81□□□□□ -0.52
MKS1-212ENST00000583577 ST18O60284 1047 aa11.81□□□□□ -0.52
MKS1-212ENST00000583577 XRCC6P12956 609 aaKnown RBP eCLIP11.81□□□□□ -0.52
MKS1-212ENST00000583577 OS9Q13438 667 aaPredicted RBP11.81□□□□□ -0.52
MKS1-212ENST00000583577 C9orf50Q5SZB4 431 aa11.81□□□□□ -0.52
MKS1-212ENST00000583577 GADL1Q6ZQY3 521 aa11.81□□□□□ -0.52
MKS1-212ENST00000583577 SMCR8Q8TEV9 937 aaPredicted RBP11.81□□□□□ -0.52
MKS1-212ENST00000583577 GRPEL1Q9HAV7 217 aa11.81□□□□□ -0.52
MKS1-212ENST00000583577 PLXNB2O15031 1838 aa11.81□□□□□ -0.52
MKS1-212ENST00000583577 SURF6O75683 361 aaKnown RBP11.8□□□□□ -0.52
MKS1-212ENST00000583577 IFIT1P09914 478 aaKnown RBP11.8□□□□□ -0.52
MKS1-212ENST00000583577 COL6A1P12109 1028 aa11.8□□□□□ -0.52
MKS1-212ENST00000583577 PUM3Q15397 648 aaKnown RBP11.8□□□□□ -0.52
MKS1-212ENST00000583577 C15orf52Q6ZUT6 534 aaKnown RBP11.8□□□□□ -0.52
MKS1-212ENST00000583577 ALYREFQ86V81 257 aaKnown RBP11.8□□□□□ -0.52
MKS1-212ENST00000583577 PLEKHM2Q8IWE5 1019 aa11.8□□□□□ -0.52
MKS1-212ENST00000583577 SIRT2Q8IXJ6 389 aa11.8□□□□□ -0.52
MKS1-212ENST00000583577 ANKRD13CQ8N6S4 541 aa11.8□□□□□ -0.52
MKS1-212ENST00000583577 VGLL2Q8N8G2 317 aa11.8□□□□□ -0.52
MKS1-212ENST00000583577 ANP32BQ92688 251 aaKnown RBP11.8□□□□□ -0.52
MKS1-212ENST00000583577 TNPO1Q92973 898 aaKnown RBP11.8□□□□□ -0.52
MKS1-212ENST00000583577 KIF2CQ99661 725 aa11.8□□□□□ -0.52
MKS1-212ENST00000583577 C1QTNF1Q9BXJ1 281 aa11.8□□□□□ -0.52
MKS1-212ENST00000583577 TMOD2Q9NZR1 351 aa11.8□□□□□ -0.52
MKS1-212ENST00000583577 PRKAG2Q9UGJ0 569 aa11.8□□□□□ -0.52
MKS1-212ENST00000583577 XIRP2A4UGR9 3374 aa11.79□□□□□ -0.52
MKS1-212ENST00000583577 CHD9Q3L8U1 2897 aa11.79□□□□□ -0.52
MKS1-212ENST00000583577 SLC5A1P13866 664 aa11.79□□□□□ -0.52
MKS1-212ENST00000583577 SMAD3P84022 425 aaKnown RBP11.79□□□□□ -0.52
MKS1-212ENST00000583577 ATP2B3Q16720 1220 aa11.79□□□□□ -0.52
MKS1-212ENST00000583577 KLHL40Q2TBA0 621 aa11.79□□□□□ -0.52
MKS1-212ENST00000583577 ATXN2LQ8WWM7 1075 aaKnown RBP11.79□□□□□ -0.52
MKS1-212ENST00000583577 ASB2Q96Q27 587 aa11.79□□□□□ -0.52
MKS1-212ENST00000583577 AKAP2Q9Y2D5 859 aa11.79□□□□□ -0.52
MKS1-212ENST00000583577 CXCL11O14625 94 aa11.78□□□□□ -0.52
MKS1-212ENST00000583577 PRKAR2AP13861 404 aaKnown RBP11.78□□□□□ -0.52
MKS1-212ENST00000583577 TFCP2Q12800 502 aa11.78□□□□□ -0.52
MKS1-212ENST00000583577 GRIN2CQ14957 1233 aa11.78□□□□□ -0.52
MKS1-212ENST00000583577 HSP90AB4PQ58FF6 505 aa11.78□□□□□ -0.52
MKS1-212ENST00000583577 CAVIN4Q5BKX8 364 aa11.78□□□□□ -0.52
MKS1-212ENST00000583577 FASTKD5Q7L8L6 764 aaKnown RBP11.78□□□□□ -0.52
MKS1-212ENST00000583577 VPS37DQ86XT2 251 aa11.78□□□□□ -0.52
MKS1-212ENST00000583577 LPIN2Q92539 896 aa11.78□□□□□ -0.52
MKS1-212ENST00000583577 IL17RAQ96F46 866 aa11.78□□□□□ -0.52
MKS1-212ENST00000583577 THEGQ9P2T0 379 aa11.78□□□□□ -0.52
MKS1-212ENST00000583577 ARIH1Q9Y4X5 557 aaPredicted RBP11.78□□□□□ -0.52
MKS1-212ENST00000583577 PHIPQ8WWQ0 1821 aa11.77□□□□□ -0.52
MKS1-212ENST00000583577 FGFR2P21802 821 aa11.77□□□□□ -0.53
MKS1-212ENST00000583577 HIBADHP31937 336 aaKnown RBP11.77□□□□□ -0.53
MKS1-212ENST00000583577 ATN1P54259 1190 aaPredicted RBP11.77□□□□□ -0.53
MKS1-212ENST00000583577 ANAPC15P60006 121 aa11.77□□□□□ -0.53
MKS1-212ENST00000583577 CCDC173Q0VFZ6 552 aa11.77□□□□□ -0.53
MKS1-212ENST00000583577 GRIK5Q16478 980 aa11.77□□□□□ -0.53
MKS1-212ENST00000583577 HS1BP3Q53T59 392 aa11.77□□□□□ -0.53
MKS1-212ENST00000583577 FAM83AQ86UY5 434 aa11.77□□□□□ -0.53
MKS1-212ENST00000583577 ERC1Q8IUD2 1116 aa11.77□□□□□ -0.53
MKS1-212ENST00000583577 TRIB2Q92519 343 aa11.77□□□□□ -0.53
MKS1-212ENST00000583577 USP26Q9BXU7 913 aa11.77□□□□□ -0.53
MKS1-212ENST00000583577 SENP6Q9GZR1 1112 aaPredicted RBP11.77□□□□□ -0.53
MKS1-212ENST00000583577 A0A0G2JLL6 359 aaPredicted RBP11.76□□□□□ -0.53
MKS1-212ENST00000583577 MCCP23508 829 aa11.76□□□□□ -0.53
MKS1-212ENST00000583577 GYG1P46976 350 aa11.76□□□□□ -0.53
MKS1-212ENST00000583577 MRPS5P82675 430 aaKnown RBP11.76□□□□□ -0.53
MKS1-212ENST00000583577 PRRT2Q7Z6L0 340 aaPredicted RBP11.76□□□□□ -0.53
MKS1-212ENST00000583577 FAM84BQ96KN1 310 aaPredicted RBP11.76□□□□□ -0.53
MKS1-212ENST00000583577 NECAB3Q96P71 396 aaPredicted RBP11.76□□□□□ -0.53
MKS1-212ENST00000583577 LRFN3Q9BTN0 628 aa11.76□□□□□ -0.53
MKS1-212ENST00000583577 ZNF112Q9UJU3 913 aa11.76□□□□□ -0.53
MKS1-212ENST00000583577 EXOC6BQ9Y2D4 811 aa11.76□□□□□ -0.53
MKS1-212ENST00000583577 PLXNA1Q9UIW2 1896 aa11.76□□□□□ -0.53
MKS1-212ENST00000583577 ZDBF2Q9HCK1 2354 aa11.76□□□□□ -0.53
MKS1-212ENST00000583577 WDFY4Q6ZS81 3184 aa11.75□□□□□ -0.53
MKS1-212ENST00000583577 CHD7Q9P2D1 2997 aa11.75□□□□□ -0.53
MKS1-212ENST00000583577 ERC2O15083 957 aa11.75□□□□□ -0.53
MKS1-212ENST00000583577 CYP2B6P20813 491 aa11.75□□□□□ -0.53
MKS1-212ENST00000583577 ZNF445P59923 1031 aa11.75□□□□□ -0.53
MKS1-212ENST00000583577 NOL9Q5SY16 702 aaKnown RBP11.75□□□□□ -0.53
MKS1-212ENST00000583577 FBXO33Q7Z6M2 555 aa11.75□□□□□ -0.53
MKS1-212ENST00000583577 TEKT1Q969V4 418 aa11.75□□□□□ -0.53
MKS1-212ENST00000583577 TRIM44Q96DX7 344 aaPredicted RBP11.75□□□□□ -0.53
MKS1-212ENST00000583577 NEUROD6Q96NK8 337 aa11.75□□□□□ -0.53
MKS1-212ENST00000583577 GPR108Q9NPR9 543 aa11.75□□□□□ -0.53
MKS1-212ENST00000583577 GJD2Q9UKL4 321 aa11.75□□□□□ -0.53
MKS1-212ENST00000583577 ZHX2Q9Y6X8 837 aa11.75□□□□□ -0.53
MKS1-212ENST00000583577 RLFQ13129 1914 aa11.75□□□□□ -0.53
MKS1-212ENST00000583577 A0A1B0GUL7 405 aa11.74□□□□□ -0.53
MKS1-212ENST00000583577 RAB11FIP3O75154 756 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms