RNA–Protein interactions for RNA: ENST00000583475.1

VAPA-206, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-206ENST00000583475 TMEM87BQ96K49 555 aa6.22□□□□□ -1.41
VAPA-206ENST00000583475 MKNK2Q9HBH9 465 aa6.22□□□□□ -1.41
VAPA-206ENST00000583475 BSDC1Q9NW68 430 aaPredicted RBP6.22□□□□□ -1.41
VAPA-206ENST00000583475 KIAA1522Q9P206 1035 aaPredicted RBP6.22□□□□□ -1.41
VAPA-206ENST00000583475 CCDC39Q9UFE4 941 aa6.22□□□□□ -1.41
VAPA-206ENST00000583475 ADAM30Q9UKF2 790 aa6.22□□□□□ -1.41
VAPA-206ENST00000583475 POLR3KQ9Y2Y1 108 aaPredicted RBP6.22□□□□□ -1.41
VAPA-206ENST00000583475 UPK3BL1B0FP48 263 aa6.21□□□□□ -1.42
VAPA-206ENST00000583475 UPK3BL2E5RIL1 263 aa6.21□□□□□ -1.42
VAPA-206ENST00000583475 RBAK-RBAKDNI3L0D1 243 aa6.21□□□□□ -1.42
VAPA-206ENST00000583475 RECKO95980 971 aa6.21□□□□□ -1.42
VAPA-206ENST00000583475 MPP2Q14168 576 aa6.21□□□□□ -1.42
VAPA-206ENST00000583475 TMEM201Q5SNT2 666 aa6.21□□□□□ -1.42
VAPA-206ENST00000583475 REC114Q7Z4M0 266 aa6.21□□□□□ -1.42
VAPA-206ENST00000583475 METTL5Q9NRN9 209 aaKnown RBP6.21□□□□□ -1.42
VAPA-206ENST00000583475 PLAGL2Q9UPG8 496 aa6.21□□□□□ -1.42
VAPA-206ENST00000583475 CCDC9Q9Y3X0 531 aaKnown RBP6.21□□□□□ -1.42
VAPA-206ENST00000583475 SUPT16HQ9Y5B9 1047 aaKnown RBP6.21□□□□□ -1.42
VAPA-206ENST00000583475 TLR3O15455 904 aaKnown RBP6.2□□□□□ -1.42
VAPA-206ENST00000583475 GRIN3BO60391 1043 aa6.2□□□□□ -1.42
VAPA-206ENST00000583475 PLCG1P19174 1290 aa6.2□□□□□ -1.42
VAPA-206ENST00000583475 CRKP46108 304 aa6.2□□□□□ -1.42
VAPA-206ENST00000583475 NETO1Q8TDF5 533 aa6.2□□□□□ -1.42
VAPA-206ENST00000583475 XAGE3Q8WTP9 111 aa6.2□□□□□ -1.42
VAPA-206ENST00000583475 MRRFQ96E11 262 aaKnown RBP6.2□□□□□ -1.42
VAPA-206ENST00000583475 MIPEPQ99797 713 aa6.2□□□□□ -1.42
VAPA-206ENST00000583475 GTF2IRD1Q9UHL9 959 aa6.2□□□□□ -1.42
VAPA-206ENST00000583475 GP2P55259 537 aaKnown RBP6.19□□□□□ -1.42
VAPA-206ENST00000583475 LETMD1Q6P1Q0 360 aa6.19□□□□□ -1.42
VAPA-206ENST00000583475 RNF34Q969K3 372 aa6.19□□□□□ -1.42
VAPA-206ENST00000583475 DPH2Q9BQC3 489 aaPredicted RBP6.19□□□□□ -1.42
VAPA-206ENST00000583475 LRRC3Q9BY71 257 aa6.19□□□□□ -1.42
VAPA-206ENST00000583475 UBP1Q9NZI7 540 aa6.19□□□□□ -1.42
VAPA-206ENST00000583475 REV1Q9UBZ9 1251 aa6.19□□□□□ -1.42
VAPA-206ENST00000583475 OAS3Q9Y6K5 1087 aaKnown RBP6.19□□□□□ -1.42
VAPA-206ENST00000583475 SCAMP3O14828 347 aaKnown RBP6.18□□□□□ -1.42
VAPA-206ENST00000583475 HTR3BO95264 441 aa6.18□□□□□ -1.42
VAPA-206ENST00000583475 CEACAM5P06731 702 aa6.18□□□□□ -1.42
VAPA-206ENST00000583475 BNIP3Q12983 259 aa6.18□□□□□ -1.42
VAPA-206ENST00000583475 NKPD1Q17RQ9 610 aa6.18□□□□□ -1.42
VAPA-206ENST00000583475 SPRED2Q7Z698 418 aa6.18□□□□□ -1.42
VAPA-206ENST00000583475 CDH24Q86UP0 819 aa6.18□□□□□ -1.42
VAPA-206ENST00000583475 VSIG10LQ86VR7 867 aa6.18□□□□□ -1.42
VAPA-206ENST00000583475 METTL16Q86W50 562 aaKnown RBP6.18□□□□□ -1.42
VAPA-206ENST00000583475 WFDC3Q8IUB2 231 aa6.18□□□□□ -1.42
VAPA-206ENST00000583475 BCL7CQ8WUZ0 217 aaPredicted RBP6.18□□□□□ -1.42
VAPA-206ENST00000583475 EAF1Q96JC9 268 aaPredicted RBP6.18□□□□□ -1.42
VAPA-206ENST00000583475 NT5C1AQ9BXI3 368 aa6.18□□□□□ -1.42
VAPA-206ENST00000583475 TNKS2Q9H2K2 1166 aa6.18□□□□□ -1.42
VAPA-206ENST00000583475 BRMS1Q9HCU9 246 aa6.18□□□□□ -1.42
VAPA-206ENST00000583475 PRDM5Q9NQX1 630 aaPredicted RBP6.18□□□□□ -1.42
VAPA-206ENST00000583475 PRR33A8MZF0 331 aa6.17□□□□□ -1.42
VAPA-206ENST00000583475 CHURC1-FNTBB4DL54 471 aa6.17□□□□□ -1.42
VAPA-206ENST00000583475 DNAJA2O60884 412 aa6.17□□□□□ -1.42
VAPA-206ENST00000583475 ATE1O95260 518 aa6.17□□□□□ -1.42
VAPA-206ENST00000583475 RACK1P63244 317 aaKnown RBP6.17□□□□□ -1.42
VAPA-206ENST00000583475 IFI16Q16666 785 aaKnown RBP6.17□□□□□ -1.42
VAPA-206ENST00000583475 CWF19L2Q2TBE0 894 aaKnown RBP6.17□□□□□ -1.42
VAPA-206ENST00000583475 ZNF394Q53GI3 561 aa6.17□□□□□ -1.42
VAPA-206ENST00000583475 ARHGAP27Q6ZUM4 889 aa6.17□□□□□ -1.42
VAPA-206ENST00000583475 USP48Q86UV5 1035 aa6.17□□□□□ -1.42
VAPA-206ENST00000583475 DNAJB8Q8NHS0 232 aa6.17□□□□□ -1.42
VAPA-206ENST00000583475 PPP1R13LQ8WUF5 828 aa6.17□□□□□ -1.42
VAPA-206ENST00000583475 DDX41Q9UJV9 622 aaKnown RBP6.17□□□□□ -1.42
VAPA-206ENST00000583475 VAV3Q9UKW4 847 aa6.17□□□□□ -1.42
VAPA-206ENST00000583475 TPX2Q9ULW0 747 aaKnown RBP6.17□□□□□ -1.42
VAPA-206ENST00000583475 MAPK8IP1Q9UQF2 711 aa6.17□□□□□ -1.42
VAPA-206ENST00000583475 PCDHGB7Q9Y5F8 929 aa6.17□□□□□ -1.42
VAPA-206ENST00000583475 TMEM265A0A087WTH1 108 aa6.16□□□□□ -1.42
VAPA-206ENST00000583475 ITIH2P19823 946 aa6.16□□□□□ -1.42
VAPA-206ENST00000583475 PRKCQQ04759 706 aa6.16□□□□□ -1.42
VAPA-206ENST00000583475 SEZ6Q53EL9 994 aa6.16□□□□□ -1.42
VAPA-206ENST00000583475 SFRP5Q5T4F7 317 aa6.16□□□□□ -1.42
VAPA-206ENST00000583475 C22orf34Q6ZV56 151 aa6.16□□□□□ -1.42
VAPA-206ENST00000583475 SLITRK4Q8IW52 837 aa6.16□□□□□ -1.42
VAPA-206ENST00000583475 SPACA3Q8IXA5 215 aa6.16□□□□□ -1.42
VAPA-206ENST00000583475 SLFN12Q8IYM2 578 aa6.16□□□□□ -1.42
VAPA-206ENST00000583475 FAM13CQ8NE31 585 aa6.16□□□□□ -1.42
VAPA-206ENST00000583475 MISP3Q96FF7 219 aa6.16□□□□□ -1.42
VAPA-206ENST00000583475 FBXL18Q96ME1 805 aa6.16□□□□□ -1.42
VAPA-206ENST00000583475 SPON2Q9BUD6 331 aa6.16□□□□□ -1.42
VAPA-206ENST00000583475 KRTAP4-8Q9BYQ9 185 aa6.16□□□□□ -1.42
VAPA-206ENST00000583475 EHMT1Q9H9B1 1298 aa6.16□□□□□ -1.42
VAPA-206ENST00000583475 PAK6Q9NQU5 681 aaPredicted RBP6.16□□□□□ -1.42
VAPA-206ENST00000583475 ANGEL1Q9UNK9 670 aaKnown RBP6.16□□□□□ -1.42
VAPA-206ENST00000583475 CEP131Q9UPN4 1083 aa6.16□□□□□ -1.42
VAPA-206ENST00000583475 SLC5A6Q9Y289 635 aa6.16□□□□□ -1.42
VAPA-206ENST00000583475 PCDHB14Q9Y5E9 798 aa6.16□□□□□ -1.42
VAPA-206ENST00000583475 SNX11Q9Y5W9 270 aa6.16□□□□□ -1.42
VAPA-206ENST00000583475 SLC22A31A6NKX4 558 aa6.15□□□□□ -1.42
VAPA-206ENST00000583475 ZNF865P0CJ78 1059 aaPredicted RBP6.15□□□□□ -1.42
VAPA-206ENST00000583475 YARSP54577 528 aaKnown RBP6.15□□□□□ -1.42
VAPA-206ENST00000583475 APOBRQ0VD83 1088 aa6.15□□□□□ -1.42
VAPA-206ENST00000583475 AOC3Q16853 763 aa6.15□□□□□ -1.42
VAPA-206ENST00000583475 ZNF574Q6ZN55 896 aaPredicted RBP6.15□□□□□ -1.42
VAPA-206ENST00000583475 KIAA0825Q8IV33 1275 aa6.15□□□□□ -1.42
VAPA-206ENST00000583475 STK11IPQ8N1F8 1099 aa6.15□□□□□ -1.42
VAPA-206ENST00000583475 NKD1Q969G9 470 aa6.15□□□□□ -1.42
VAPA-206ENST00000583475 GNAT3A8MTJ3 354 aa6.14□□□□□ -1.43
VAPA-206ENST00000583475 CD8BP10966 210 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms