RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 JAK2O60674 1132 aa6.61□□□□□ -1.35
RTTN-209ENST00000583043 SIK1P57059 783 aa6.61□□□□□ -1.35
RTTN-209ENST00000583043 LRRC24Q50LG9 513 aa6.61□□□□□ -1.35
RTTN-209ENST00000583043 SPECC1LQ69YQ0 1117 aa6.61□□□□□ -1.35
RTTN-209ENST00000583043 ZNF589Q86UQ0 364 aaPredicted RBP6.61□□□□□ -1.35
RTTN-209ENST00000583043 LARP6Q9BRS8 491 aaKnown RBP6.61□□□□□ -1.35
RTTN-209ENST00000583043 NT5C3AQ9H0P0 336 aa6.61□□□□□ -1.35
RTTN-209ENST00000583043 CTAGE9A4FU28 777 aa6.61□□□□□ -1.35
RTTN-209ENST00000583043 GNG11P61952 73 aa6.61□□□□□ -1.35
RTTN-209ENST00000583043 PKP1Q13835 747 aa6.61□□□□□ -1.35
RTTN-209ENST00000583043 RBM43Q6ZSC3 357 aaKnown RBP6.61□□□□□ -1.35
RTTN-209ENST00000583043 CNBD1Q8NA66 436 aa6.61□□□□□ -1.35
RTTN-209ENST00000583043 ARFGAP3Q9NP61 516 aa6.61□□□□□ -1.35
RTTN-209ENST00000583043 MCM9Q9NXL9 1143 aa6.61□□□□□ -1.35
RTTN-209ENST00000583043 MED1Q15648 1581 aaPredicted RBP6.61□□□□□ -1.35
RTTN-209ENST00000583043 KDM3AQ9Y4C1 1321 aa6.61□□□□□ -1.35
RTTN-209ENST00000583043 TACC1O75410 805 aa6.61□□□□□ -1.35
RTTN-209ENST00000583043 NAPAP54920 295 aa6.61□□□□□ -1.35
RTTN-209ENST00000583043 NAP1L1P55209 391 aaKnown RBP6.61□□□□□ -1.35
RTTN-209ENST00000583043 SPATA1Q5VX52 437 aa6.61□□□□□ -1.35
RTTN-209ENST00000583043 HAUS3Q68CZ6 603 aa6.61□□□□□ -1.35
RTTN-209ENST00000583043 CACNA2D4Q7Z3S7 1137 aa6.61□□□□□ -1.35
RTTN-209ENST00000583043 KCTD17Q8N5Z5 321 aa6.61□□□□□ -1.35
RTTN-209ENST00000583043 STRBPQ96SI9 672 aaKnown RBP6.61□□□□□ -1.35
RTTN-209ENST00000583043 DNAI2Q9GZS0 605 aa6.61□□□□□ -1.35
RTTN-209ENST00000583043 OSBPL5Q9H0X9 879 aaPredicted RBP6.61□□□□□ -1.35
RTTN-209ENST00000583043 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.61□□□□□ -1.35
RTTN-209ENST00000583043 SWAP70Q9UH65 585 aa6.61□□□□□ -1.35
RTTN-209ENST00000583043 LUC7L2Q9Y383 392 aaKnown RBP6.61□□□□□ -1.35
RTTN-209ENST00000583043 MORC2Q9Y6X9 1032 aaPredicted RBP6.61□□□□□ -1.35
RTTN-209ENST00000583043 A0A1B0GVL5 298 aa6.6□□□□□ -1.35
RTTN-209ENST00000583043 POTEJP0CG39 1038 aa6.6□□□□□ -1.35
RTTN-209ENST00000583043 RPL13P26373 211 aaKnown RBP6.6□□□□□ -1.35
RTTN-209ENST00000583043 TNNT3P45378 269 aaPredicted RBP6.6□□□□□ -1.35
RTTN-209ENST00000583043 IKQ13123 557 aaPredicted RBP6.6□□□□□ -1.35
RTTN-209ENST00000583043 BICDL1Q6ZP65 573 aa6.6□□□□□ -1.35
RTTN-209ENST00000583043 ATG9AQ7Z3C6 839 aa6.6□□□□□ -1.35
RTTN-209ENST00000583043 CRACR2AQ9BSW2 395 aa6.6□□□□□ -1.35
RTTN-209ENST00000583043 NFAT5O94916 1531 aa6.6□□□□□ -1.35
RTTN-209ENST00000583043 NUTM2BA6NNL0 878 aaPredicted RBP6.6□□□□□ -1.35
RTTN-209ENST00000583043 NUTM2EB1AL46 878 aaPredicted RBP6.6□□□□□ -1.35
RTTN-209ENST00000583043 LIG1P18858 919 aa6.6□□□□□ -1.35
RTTN-209ENST00000583043 CETN2P41208 172 aa6.6□□□□□ -1.35
RTTN-209ENST00000583043 ZNF594Q96JF6 807 aaPredicted RBP6.6□□□□□ -1.35
RTTN-209ENST00000583043 CCDC17Q96LX7 622 aa6.6□□□□□ -1.35
RTTN-209ENST00000583043 ARMT1Q9H993 441 aa6.6□□□□□ -1.35
RTTN-209ENST00000583043 AATFQ9NY61 560 aaKnown RBP eCLIP6.6□□□□□ -1.35
RTTN-209ENST00000583043 TLR7Q9NYK1 1049 aaKnown RBP6.6□□□□□ -1.35
RTTN-209ENST00000583043 GGA1Q9UJY5 639 aa6.6□□□□□ -1.35
RTTN-209ENST00000583043 PHLPP2Q6ZVD8 1323 aa6.6□□□□□ -1.35
RTTN-209ENST00000583043 MMP1P03956 469 aa6.6□□□□□ -1.35
RTTN-209ENST00000583043 GCFC2P16383 781 aaKnown RBP6.6□□□□□ -1.35
RTTN-209ENST00000583043 USP8P40818 1118 aa6.6□□□□□ -1.35
RTTN-209ENST00000583043 PAK1Q13153 545 aa6.6□□□□□ -1.35
RTTN-209ENST00000583043 SLFNL1Q499Z3 407 aa6.6□□□□□ -1.35
RTTN-209ENST00000583043 PPP1R18Q6NYC8 613 aa6.6□□□□□ -1.35
RTTN-209ENST00000583043 JARID2Q92833 1246 aaPredicted RBP6.6□□□□□ -1.35
RTTN-209ENST00000583043 PODXL2Q9NZ53 605 aa6.6□□□□□ -1.35
RTTN-209ENST00000583043 HDAC9Q9UKV0 1011 aa6.6□□□□□ -1.35
RTTN-209ENST00000583043 SUGT1Q9Y2Z0 365 aa6.6□□□□□ -1.35
RTTN-209ENST00000583043 SRPRBQ9Y5M8 271 aaKnown RBP6.6□□□□□ -1.35
RTTN-209ENST00000583043 MYO5BQ9ULV0 1848 aa6.6□□□□□ -1.35
RTTN-209ENST00000583043 ORC4O43929 436 aa6.6□□□□□ -1.35
RTTN-209ENST00000583043 BBOX1O75936 387 aa6.6□□□□□ -1.35
RTTN-209ENST00000583043 EEF1GP26641 437 aaKnown RBP6.6□□□□□ -1.35
RTTN-209ENST00000583043 MARCKSP29966 332 aaPredicted RBP6.6□□□□□ -1.35
RTTN-209ENST00000583043 ZNF76P36508 570 aa6.6□□□□□ -1.35
RTTN-209ENST00000583043 RBM26Q5T8P6 1007 aaKnown RBP6.6□□□□□ -1.35
RTTN-209ENST00000583043 SV2BQ7L1I2 683 aa6.6□□□□□ -1.35
RTTN-209ENST00000583043 CROCCP2Q86T23 111 aa6.6□□□□□ -1.35
RTTN-209ENST00000583043 OSBP2Q969R2 916 aa6.6□□□□□ -1.35
RTTN-209ENST00000583043 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.6□□□□□ -1.35
RTTN-209ENST00000583043 XDHP47989 1333 aa6.6□□□□□ -1.35
RTTN-209ENST00000583043 SYNRGQ9UMZ2 1314 aa6.6□□□□□ -1.35
RTTN-209ENST00000583043 CACNA1FO60840 1977 aa6.6□□□□□ -1.35
RTTN-209ENST00000583043 SLFN14P0C7P3 912 aa6.6□□□□□ -1.35
RTTN-209ENST00000583043 CYP19A1P11511 503 aaPredicted RBP6.6□□□□□ -1.35
RTTN-209ENST00000583043 SCG2P13521 617 aa6.6□□□□□ -1.35
RTTN-209ENST00000583043 LRRC8AQ8IWT6 810 aa6.6□□□□□ -1.35
RTTN-209ENST00000583043 CCDC155Q8N6L0 562 aa6.6□□□□□ -1.35
RTTN-209ENST00000583043 PIGBQ92521 554 aa6.6□□□□□ -1.35
RTTN-209ENST00000583043 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.6□□□□□ -1.35
RTTN-209ENST00000583043 TANGO6Q9C0B7 1094 aa6.6□□□□□ -1.35
RTTN-209ENST00000583043 DAAM1Q9Y4D1 1078 aa6.6□□□□□ -1.35
RTTN-209ENST00000583043 SMARCA1P28370 1054 aa6.59□□□□□ -1.35
RTTN-209ENST00000583043 CHRNDQ07001 517 aa6.59□□□□□ -1.35
RTTN-209ENST00000583043 BARGINQ6ZT62 677 aa6.59□□□□□ -1.35
RTTN-209ENST00000583043 GREM2Q9H772 168 aa6.59□□□□□ -1.35
RTTN-209ENST00000583043 BIN1O00499 593 aa6.59□□□□□ -1.35
RTTN-209ENST00000583043 IVLP07476 585 aa6.59□□□□□ -1.35
RTTN-209ENST00000583043 ALDH1B1P30837 517 aa6.59□□□□□ -1.35
RTTN-209ENST00000583043 BRD3Q15059 726 aa6.59□□□□□ -1.35
RTTN-209ENST00000583043 WHAMMP3Q1A5X7 153 aa6.59□□□□□ -1.35
RTTN-209ENST00000583043 EPHA10Q5JZY3 1008 aa6.59□□□□□ -1.35
RTTN-209ENST00000583043 ZNF34Q8IZ26 560 aa6.59□□□□□ -1.35
RTTN-209ENST00000583043 PLVAPQ9BX97 442 aa6.59□□□□□ -1.35
RTTN-209ENST00000583043 RIPOR2Q9Y4F9 1068 aa6.59□□□□□ -1.35
RTTN-209ENST00000583043 NR1I2O75469 434 aa6.59□□□□□ -1.35
RTTN-209ENST00000583043 CRKLP46109 303 aaKnown RBP6.59□□□□□ -1.35
RTTN-209ENST00000583043 CC2D2BQ6DHV5 1058 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms