RNA–Protein interactions for RNA: ENST00000582376.1

GGA3-212, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-212ENST00000582376 TACC3Q9Y6A5 838 aa11.59□□□□□ -0.55
GGA3-212ENST00000582376 MYBBP1AQ9BQG0 1328 aaKnown RBP11.59□□□□□ -0.55
GGA3-212ENST00000582376 RFX7Q2KHR2 1363 aa11.58□□□□□ -0.56
GGA3-212ENST00000582376 TCF20Q9UGU0 1960 aaKnown RBP11.58□□□□□ -0.56
GGA3-212ENST00000582376 RAG1P15918 1043 aa11.58□□□□□ -0.56
GGA3-212ENST00000582376 ITGB8P26012 769 aa11.58□□□□□ -0.56
GGA3-212ENST00000582376 ATP2B2Q01814 1243 aa11.58□□□□□ -0.56
GGA3-212ENST00000582376 FPGSQ05932 587 aa11.58□□□□□ -0.56
GGA3-212ENST00000582376 PICALMQ13492 652 aa11.58□□□□□ -0.56
GGA3-212ENST00000582376 ADGRE1Q14246 886 aa11.58□□□□□ -0.56
GGA3-212ENST00000582376 AAK1Q2M2I8 961 aa11.58□□□□□ -0.56
GGA3-212ENST00000582376 C1orf53Q5VUE5 145 aa11.58□□□□□ -0.56
GGA3-212ENST00000582376 TSR2Q969E8 191 aaKnown RBP11.58□□□□□ -0.56
GGA3-212ENST00000582376 PAGR1Q9BTK6 254 aa11.58□□□□□ -0.56
GGA3-212ENST00000582376 DDX4Q9NQI0 724 aaKnown RBP11.58□□□□□ -0.56
GGA3-212ENST00000582376 C9orf78Q9NZ63 289 aaPredicted RBP11.58□□□□□ -0.56
GGA3-212ENST00000582376 FAM196BA6NMK8 535 aa11.57□□□□□ -0.56
GGA3-212ENST00000582376 F6X3S4 739 aa11.57□□□□□ -0.56
GGA3-212ENST00000582376 APAF1O14727 1248 aa11.57□□□□□ -0.56
GGA3-212ENST00000582376 GPR37L1O60883 481 aa11.57□□□□□ -0.56
GGA3-212ENST00000582376 GLRX3O76003 335 aaKnown RBP11.57□□□□□ -0.56
GGA3-212ENST00000582376 MYCNP04198 464 aaPredicted RBP11.57□□□□□ -0.56
GGA3-212ENST00000582376 CLTBP09497 229 aa11.57□□□□□ -0.56
GGA3-212ENST00000582376 TLE2Q04725 743 aa11.57□□□□□ -0.56
GGA3-212ENST00000582376 MTMR2Q13614 643 aa11.57□□□□□ -0.56
GGA3-212ENST00000582376 PUM3Q15397 648 aaKnown RBP11.57□□□□□ -0.56
GGA3-212ENST00000582376 CCDC129Q6ZRS4 1044 aa11.57□□□□□ -0.56
GGA3-212ENST00000582376 BDP1A6H8Y1 2624 aa11.56□□□□□ -0.56
GGA3-212ENST00000582376 MYH13Q9UKX3 1938 aa11.56□□□□□ -0.56
GGA3-212ENST00000582376 MUC6Q6W4X9 2439 aa11.56□□□□□ -0.56
GGA3-212ENST00000582376 SLC15A5A6NIM6 579 aa11.56□□□□□ -0.56
GGA3-212ENST00000582376 KIAA0355O15063 1070 aa11.56□□□□□ -0.56
GGA3-212ENST00000582376 FGFR2P21802 821 aa11.56□□□□□ -0.56
GGA3-212ENST00000582376 CYP2C19P33261 490 aa11.56□□□□□ -0.56
GGA3-212ENST00000582376 CAP2P40123 477 aa11.56□□□□□ -0.56
GGA3-212ENST00000582376 PBX2P40425 430 aa11.56□□□□□ -0.56
GGA3-212ENST00000582376 ADCYAP1R1P41586 468 aa11.56□□□□□ -0.56
GGA3-212ENST00000582376 MRE11P49959 708 aa11.56□□□□□ -0.56
GGA3-212ENST00000582376 BACE1P56817 501 aa11.56□□□□□ -0.56
GGA3-212ENST00000582376 TRPV1Q8NER1 839 aa11.56□□□□□ -0.56
GGA3-212ENST00000582376 FERMT2Q96AC1 680 aa11.56□□□□□ -0.56
GGA3-212ENST00000582376 SUCLG2Q96I99 432 aa11.56□□□□□ -0.56
GGA3-212ENST00000582376 PBX4Q9BYU1 374 aa11.56□□□□□ -0.56
GGA3-212ENST00000582376 GAKO14976 1311 aa11.56□□□□□ -0.56
GGA3-212ENST00000582376 CYBAP13498 195 aa11.55□□□□□ -0.56
GGA3-212ENST00000582376 SLC5A1P13866 664 aa11.55□□□□□ -0.56
GGA3-212ENST00000582376 CCNA1P78396 465 aa11.55□□□□□ -0.56
GGA3-212ENST00000582376 TFF2Q03403 129 aa11.55□□□□□ -0.56
GGA3-212ENST00000582376 WDR78Q5VTH9 848 aa11.55□□□□□ -0.56
GGA3-212ENST00000582376 WDR18Q9BV38 432 aa11.55□□□□□ -0.56
GGA3-212ENST00000582376 NDUFB9Q9Y6M9 179 aa11.55□□□□□ -0.56
GGA3-212ENST00000582376 MYO9BQ13459 2157 aa11.55□□□□□ -0.56
GGA3-212ENST00000582376 SALL1Q9NSC2 1324 aa11.55□□□□□ -0.56
GGA3-212ENST00000582376 C19orf81C9J6K1 198 aa11.54□□□□□ -0.56
GGA3-212ENST00000582376 HOXC6P09630 235 aa11.54□□□□□ -0.56
GGA3-212ENST00000582376 PTPREP23469 700 aa11.54□□□□□ -0.56
GGA3-212ENST00000582376 KCNQ1P51787 676 aa11.54□□□□□ -0.56
GGA3-212ENST00000582376 ANO1Q5XXA6 986 aa11.54□□□□□ -0.56
GGA3-212ENST00000582376 SLF2Q8IX21 1173 aa11.54□□□□□ -0.56
GGA3-212ENST00000582376 NPLOC4Q8TAT6 608 aa11.54□□□□□ -0.56
GGA3-212ENST00000582376 LPIN2Q92539 896 aa11.54□□□□□ -0.56
GGA3-212ENST00000582376 KAZALD1Q96I82 304 aa11.54□□□□□ -0.56
GGA3-212ENST00000582376 TMEM39AQ9NV64 488 aa11.54□□□□□ -0.56
GGA3-212ENST00000582376 IVNS1ABPQ9Y6Y0 642 aa11.54□□□□□ -0.56
GGA3-212ENST00000582376 ATAD5Q96QE3 1844 aa11.53□□□□□ -0.56
GGA3-212ENST00000582376 FAM86C2PA6NEL3 165 aa11.53□□□□□ -0.56
GGA3-212ENST00000582376 GRXCR1A8MXD5 290 aa11.53□□□□□ -0.56
GGA3-212ENST00000582376 SEPT4O43236 478 aa11.53□□□□□ -0.56
GGA3-212ENST00000582376 ALDH1L1O75891 902 aa11.53□□□□□ -0.56
GGA3-212ENST00000582376 BTDP43251 543 aa11.53□□□□□ -0.56
GGA3-212ENST00000582376 RRP1BQ14684 758 aaKnown RBP11.53□□□□□ -0.56
GGA3-212ENST00000582376 LRRC41Q15345 812 aa11.53□□□□□ -0.56
GGA3-212ENST00000582376 NCBP3Q53F19 620 aaKnown RBP11.53□□□□□ -0.56
GGA3-212ENST00000582376 DZIP1Q86YF9 867 aaKnown RBP11.53□□□□□ -0.56
GGA3-212ENST00000582376 MICALL1Q8N3F8 863 aa11.53□□□□□ -0.56
GGA3-212ENST00000582376 ZGPATQ8N5A5 531 aaKnown RBP11.53□□□□□ -0.56
GGA3-212ENST00000582376 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.53□□□□□ -0.567e-7■■■■□ 21.6
GGA3-212ENST00000582376 C11orf16Q9NQ32 467 aa11.53□□□□□ -0.56
GGA3-212ENST00000582376 GNL3LQ9NVN8 582 aaKnown RBP11.53□□□□□ -0.56
GGA3-212ENST00000582376 MSRAQ9UJ68 235 aa11.53□□□□□ -0.56
GGA3-212ENST00000582376 RABGAP1Q9Y3P9 1069 aa11.53□□□□□ -0.56
GGA3-212ENST00000582376 MYH2Q9UKX2 1941 aa11.52□□□□□ -0.56
GGA3-212ENST00000582376 PQBP1O60828 265 aaKnown RBP11.52□□□□□ -0.57
GGA3-212ENST00000582376 NPM3O75607 178 aaKnown RBP11.52□□□□□ -0.57
GGA3-212ENST00000582376 GRB14Q14449 540 aa11.52□□□□□ -0.57
GGA3-212ENST00000582376 SKIV2LQ15477 1246 aaKnown RBP11.52□□□□□ -0.57
GGA3-212ENST00000582376 RAB30Q15771 203 aa11.52□□□□□ -0.57
GGA3-212ENST00000582376 CCDC174Q6PII3 467 aa11.52□□□□□ -0.57
GGA3-212ENST00000582376 FAM163AQ96GL9 167 aaPredicted RBP11.52□□□□□ -0.57
GGA3-212ENST00000582376 BICC1Q9H694 974 aaKnown RBP11.52□□□□□ -0.57
GGA3-212ENST00000582376 DENND2AQ9ULE3 1009 aa11.52□□□□□ -0.57
GGA3-212ENST00000582376 PHF24Q9UPV7 400 aa11.52□□□□□ -0.57
GGA3-212ENST00000582376 PLXNA1Q9UIW2 1896 aa11.52□□□□□ -0.57
GGA3-212ENST00000582376 CACNA1FO60840 1977 aa11.51□□□□□ -0.57
GGA3-212ENST00000582376 USP17L10C9JJH3 530 aa11.51□□□□□ -0.57
GGA3-212ENST00000582376 SMIM22K7EJ46 135 aa11.51□□□□□ -0.57
GGA3-212ENST00000582376 ERC2O15083 957 aa11.51□□□□□ -0.57
GGA3-212ENST00000582376 CNMDO75829 334 aa11.51□□□□□ -0.57
GGA3-212ENST00000582376 IGHA2P01877 340 aa11.51□□□□□ -0.57
GGA3-212ENST00000582376 ASNSP08243 561 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms