RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 CASTP20810 708 aaKnown RBP11.27□□□□□ -0.61
RFFL-210ENST00000582308 ANTXR2P58335 489 aa11.27□□□□□ -0.61
RFFL-210ENST00000582308 JAG1P78504 1218 aa11.27□□□□□ -0.61
RFFL-210ENST00000582308 TRDNQ13061 729 aa11.27□□□□□ -0.61
RFFL-210ENST00000582308 SHROOM1Q2M3G4 852 aaPredicted RBP11.27□□□□□ -0.61
RFFL-210ENST00000582308 CERKLQ49MI3 558 aaPredicted RBP11.27□□□□□ -0.61
RFFL-210ENST00000582308 DCAF15Q66K64 600 aa11.27□□□□□ -0.61
RFFL-210ENST00000582308 ZNF444Q8N0Y2 327 aaPredicted RBP11.27□□□□□ -0.61
RFFL-210ENST00000582308 HOOK2Q96ED9 719 aa11.27□□□□□ -0.61
RFFL-210ENST00000582308 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.27□□□□□ -0.61
RFFL-210ENST00000582308 ZNF287Q9HBT7 754 aa11.27□□□□□ -0.61
RFFL-210ENST00000582308 ZNF112Q9UJU3 913 aa11.27□□□□□ -0.61
RFFL-210ENST00000582308 PHIPQ8WWQ0 1821 aa11.26□□□□□ -0.61
RFFL-210ENST00000582308 RPS6KB1P23443 525 aa11.26□□□□□ -0.61
RFFL-210ENST00000582308 PSMA5P28066 241 aa11.26□□□□□ -0.61
RFFL-210ENST00000582308 TFAP4Q01664 338 aa11.26□□□□□ -0.61
RFFL-210ENST00000582308 EXOSC10Q01780 885 aaKnown RBP11.26□□□□□ -0.61
RFFL-210ENST00000582308 PRKG1Q13976 671 aa11.26□□□□□ -0.61
RFFL-210ENST00000582308 BLOC1S2Q6QNY1 142 aa11.26□□□□□ -0.61
RFFL-210ENST00000582308 RUFY3Q7L099 469 aa11.26□□□□□ -0.61
RFFL-210ENST00000582308 DHX32Q7L7V1 743 aaKnown RBP11.26□□□□□ -0.61
RFFL-210ENST00000582308 CHST3Q7LGC8 479 aa11.26□□□□□ -0.61
RFFL-210ENST00000582308 RALYLQ86SE5 291 aaKnown RBP11.26□□□□□ -0.61
RFFL-210ENST00000582308 ESR2Q92731 530 aa11.26□□□□□ -0.61
RFFL-210ENST00000582308 KLRG1Q96E93 195 aa11.26□□□□□ -0.61
RFFL-210ENST00000582308 CCDC17Q96LX7 622 aa11.26□□□□□ -0.61
RFFL-210ENST00000582308 ZNF341Q9BYN7 854 aa11.26□□□□□ -0.61
RFFL-210ENST00000582308 UPF3BQ9BZI7 483 aaKnown RBP11.26□□□□□ -0.61
RFFL-210ENST00000582308 PRC1O43663 620 aa11.25□□□□□ -0.61
RFFL-210ENST00000582308 NMT2O60551 498 aa11.25□□□□□ -0.61
RFFL-210ENST00000582308 GDF11O95390 407 aa11.25□□□□□ -0.61
RFFL-210ENST00000582308 HMGB1P09429 215 aaKnown RBP11.25□□□□□ -0.61
RFFL-210ENST00000582308 INPP5BP32019 993 aa11.25□□□□□ -0.61
RFFL-210ENST00000582308 GUCY1A2P33402 732 aa11.25□□□□□ -0.61
RFFL-210ENST00000582308 MCM5P33992 734 aa11.25□□□□□ -0.61
RFFL-210ENST00000582308 NF2P35240 595 aa11.25□□□□□ -0.61
RFFL-210ENST00000582308 CAP2P40123 477 aa11.25□□□□□ -0.61
RFFL-210ENST00000582308 MOB2Q70IA6 237 aa11.25□□□□□ -0.61
RFFL-210ENST00000582308 NEDD1Q8NHV4 660 aa11.25□□□□□ -0.61
RFFL-210ENST00000582308 RBM46Q8TBY0 533 aaKnown RBP11.25□□□□□ -0.61
RFFL-210ENST00000582308 TCEANC2Q96MN5 208 aa11.25□□□□□ -0.61
RFFL-210ENST00000582308 LRRC2Q9BYS8 371 aa11.25□□□□□ -0.61
RFFL-210ENST00000582308 GPHNQ9NQX3 736 aaPredicted RBP11.25□□□□□ -0.61
RFFL-210ENST00000582308 IL17RBQ9NRM6 502 aa11.25□□□□□ -0.61
RFFL-210ENST00000582308 CYP46A1Q9Y6A2 500 aa11.25□□□□□ -0.61
RFFL-210ENST00000582308 IGKV6D-41A0A0C4DH26 115 aa11.24□□□□□ -0.61
RFFL-210ENST00000582308 TSPY2A6NKD2 308 aa11.24□□□□□ -0.61
RFFL-210ENST00000582308 MPHOSPH10O00566 681 aaKnown RBP11.24□□□□□ -0.61
RFFL-210ENST00000582308 PPP1R12BO60237 982 aaPredicted RBP11.24□□□□□ -0.61
RFFL-210ENST00000582308 CTNND1O60716 968 aaKnown RBP11.24□□□□□ -0.61
RFFL-210ENST00000582308 TOMM70O94826 608 aa11.24□□□□□ -0.61
RFFL-210ENST00000582308 GH2P01242 217 aa11.24□□□□□ -0.61
RFFL-210ENST00000582308 TSPY3P0CV98 308 aa11.24□□□□□ -0.61
RFFL-210ENST00000582308 TSPY8P0CW00 308 aa11.24□□□□□ -0.61
RFFL-210ENST00000582308 NT5C2P49902 561 aa11.24□□□□□ -0.61
RFFL-210ENST00000582308 NEK4P51957 841 aa11.24□□□□□ -0.61
RFFL-210ENST00000582308 RABEP1Q15276 862 aa11.24□□□□□ -0.61
RFFL-210ENST00000582308 ABCB5Q2M3G0 1257 aa11.24□□□□□ -0.61
RFFL-210ENST00000582308 CST9Q5W186 159 aa11.24□□□□□ -0.61
RFFL-210ENST00000582308 SMC1BQ8NDV3 1235 aa11.24□□□□□ -0.61
RFFL-210ENST00000582308 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.24□□□□□ -0.61
RFFL-210ENST00000582308 IGDCC4Q8TDY8 1250 aa11.24□□□□□ -0.61
RFFL-210ENST00000582308 ZKSCAN4Q969J2 545 aaPredicted RBP11.24□□□□□ -0.61
RFFL-210ENST00000582308 TTC14Q96N46 770 aa11.24□□□□□ -0.61
RFFL-210ENST00000582308 WRNIP1Q96S55 665 aa11.24□□□□□ -0.61
RFFL-210ENST00000582308 ZKSCAN3Q9BRR0 538 aa11.24□□□□□ -0.61
RFFL-210ENST00000582308 ZNF408Q9H9D4 720 aa11.24□□□□□ -0.61
RFFL-210ENST00000582308 TSHZ2Q9NRE2 1034 aa11.24□□□□□ -0.61
RFFL-210ENST00000582308 TCP11L1Q9NUJ3 509 aa11.24□□□□□ -0.61
RFFL-210ENST00000582308 ANGEL1Q9UNK9 670 aaKnown RBP11.24□□□□□ -0.61
RFFL-210ENST00000582308 WDR19Q8NEZ3 1342 aa11.24□□□□□ -0.61
RFFL-210ENST00000582308 PLIN4Q96Q06 1357 aa11.24□□□□□ -0.61
RFFL-210ENST00000582308 PTPRFP10586 1907 aa11.23□□□□□ -0.61
RFFL-210ENST00000582308 UBE2Q2LH0YL09 131 aa11.23□□□□□ -0.61
RFFL-210ENST00000582308 CELF2O95319 508 aaKnown RBP11.23□□□□□ -0.61
RFFL-210ENST00000582308 MAP3K9P80192 1104 aa11.23□□□□□ -0.61
RFFL-210ENST00000582308 SEPT2Q15019 361 aa11.23□□□□□ -0.61
RFFL-210ENST00000582308 SEC23AQ15436 765 aa11.23□□□□□ -0.61
RFFL-210ENST00000582308 MAP3K11Q16584 847 aa11.23□□□□□ -0.61
RFFL-210ENST00000582308 RCSD1Q6JBY9 416 aa11.23□□□□□ -0.61
RFFL-210ENST00000582308 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.23□□□□□ -0.61
RFFL-210ENST00000582308 TMEM179Q6ZVK1 233 aa11.23□□□□□ -0.61
RFFL-210ENST00000582308 CLEC10AQ8IUN9 316 aa11.23□□□□□ -0.61
RFFL-210ENST00000582308 SIAH1Q8IUQ4 282 aa11.23□□□□□ -0.61
RFFL-210ENST00000582308 ENAHQ8N8S7 591 aaPredicted RBP11.23□□□□□ -0.61
RFFL-210ENST00000582308 CEP95Q96GE4 821 aa11.23□□□□□ -0.61
RFFL-210ENST00000582308 ZSCAN10Q96SZ4 725 aaPredicted RBP11.23□□□□□ -0.61
RFFL-210ENST00000582308 SENP2Q9HC62 589 aa11.23□□□□□ -0.61
RFFL-210ENST00000582308 PDRG1Q9NUG6 133 aa11.23□□□□□ -0.61
RFFL-210ENST00000582308 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.23□□□□□ -0.61
RFFL-210ENST00000582308 ZBTB21Q9ULJ3 1066 aa11.23□□□□□ -0.61
RFFL-210ENST00000582308 PASKQ96RG2 1323 aa11.23□□□□□ -0.61
RFFL-210ENST00000582308 SH2B2O14492 632 aaPredicted RBP11.22□□□□□ -0.61
RFFL-210ENST00000582308 IFIT3O14879 490 aaKnown RBP11.22□□□□□ -0.61
RFFL-210ENST00000582308 ASNSP08243 561 aa11.22□□□□□ -0.61
RFFL-210ENST00000582308 IREB2P48200 963 aaKnown RBP11.22□□□□□ -0.61
RFFL-210ENST00000582308 NOVP48745 357 aa11.22□□□□□ -0.61
RFFL-210ENST00000582308 TOB2Q14106 344 aaPredicted RBP11.22□□□□□ -0.61
RFFL-210ENST00000582308 TTLL12Q14166 644 aaPredicted RBP11.22□□□□□ -0.61
RFFL-210ENST00000582308 TMEM67Q5HYA8 995 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms