RNA–Protein interactions for RNA: ENST00000581835.1

PPP4R1-220, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 379 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-220ENST00000581835 GINM1Q9NU53 330 aa12.37□□□□□ -0.43
PPP4R1-220ENST00000581835 STAP2Q9UGK3 403 aa12.37□□□□□ -0.43
PPP4R1-220ENST00000581835 LOC285556D6RIA3 1793 aa12.37□□□□□ -0.43
PPP4R1-220ENST00000581835 ZFYP08048 801 aaPredicted RBP12.36□□□□□ -0.43
PPP4R1-220ENST00000581835 PDE1AP54750 535 aa12.36□□□□□ -0.43
PPP4R1-220ENST00000581835 CAP1Q01518 475 aa12.36□□□□□ -0.43
PPP4R1-220ENST00000581835 EVX2Q03828 476 aa12.36□□□□□ -0.43
PPP4R1-220ENST00000581835 B4GALNT3Q6L9W6 998 aa12.36□□□□□ -0.43
PPP4R1-220ENST00000581835 C17orf99Q6UX52 265 aa12.36□□□□□ -0.43
PPP4R1-220ENST00000581835 OTOP1Q7RTM1 612 aa12.36□□□□□ -0.43
PPP4R1-220ENST00000581835 APPBP2Q92624 585 aa12.36□□□□□ -0.43
PPP4R1-220ENST00000581835 OSBP2Q969R2 916 aa12.36□□□□□ -0.43
PPP4R1-220ENST00000581835 STRBPQ96SI9 672 aaKnown RBP12.36□□□□□ -0.43
PPP4R1-220ENST00000581835 WDR18Q9BV38 432 aa12.36□□□□□ -0.43
PPP4R1-220ENST00000581835 LNPKQ9C0E8 428 aa12.36□□□□□ -0.43
PPP4R1-220ENST00000581835 AS3MTQ9HBK9 375 aa12.36□□□□□ -0.43
PPP4R1-220ENST00000581835 ZBTB21Q9ULJ3 1066 aa12.36□□□□□ -0.43
PPP4R1-220ENST00000581835 SLC45A1Q9Y2W3 748 aa12.36□□□□□ -0.43
PPP4R1-220ENST00000581835 SLC4A4Q9Y6R1 1079 aa12.36□□□□□ -0.43
PPP4R1-220ENST00000581835 CENPFP49454 3210 aa12.36□□□□□ -0.43
PPP4R1-220ENST00000581835 HTTP42858 3142 aa12.36□□□□□ -0.43
PPP4R1-220ENST00000581835 ADGRA2Q96PE1 1338 aa12.36□□□□□ -0.43
PPP4R1-220ENST00000581835 ZSWIM8A7E2V4 1837 aa12.35□□□□□ -0.43
PPP4R1-220ENST00000581835 GH2P01242 217 aa12.35□□□□□ -0.43
PPP4R1-220ENST00000581835 CYP2C8P10632 490 aa12.35□□□□□ -0.43
PPP4R1-220ENST00000581835 CYP2D6P10635 497 aa12.35□□□□□ -0.43
PPP4R1-220ENST00000581835 SHMT1P34896 483 aa12.35□□□□□ -0.43
PPP4R1-220ENST00000581835 HMGCS2P54868 508 aa12.35□□□□□ -0.43
PPP4R1-220ENST00000581835 IRX6P78412 446 aaPredicted RBP12.35□□□□□ -0.43
PPP4R1-220ENST00000581835 CERKLQ49MI3 558 aaPredicted RBP12.35□□□□□ -0.43
PPP4R1-220ENST00000581835 SH3D19Q5HYK7 790 aa12.35□□□□□ -0.43
PPP4R1-220ENST00000581835 PROCA1Q8NCQ7 364 aaPredicted RBP12.35□□□□□ -0.43
PPP4R1-220ENST00000581835 PARK7Q99497 189 aaKnown RBP12.35□□□□□ -0.43
PPP4R1-220ENST00000581835 AGTPBP1Q9UPW5 1226 aa12.35□□□□□ -0.43
PPP4R1-220ENST00000581835 TRIM17Q9Y577 477 aa12.35□□□□□ -0.43
PPP4R1-220ENST00000581835 DOCK3Q8IZD9 2030 aa12.35□□□□□ -0.43
PPP4R1-220ENST00000581835 CCDC85CA6NKD9 419 aa12.34□□□□□ -0.43
PPP4R1-220ENST00000581835 USP17L12C9JPN9 530 aa12.34□□□□□ -0.43
PPP4R1-220ENST00000581835 USP17L21D6R901 530 aa12.34□□□□□ -0.43
PPP4R1-220ENST00000581835 BACE1P56817 501 aa12.34□□□□□ -0.43
PPP4R1-220ENST00000581835 LRRFIP1Q32MZ4 808 aaKnown RBP12.34□□□□□ -0.43
PPP4R1-220ENST00000581835 TREML2Q5T2D2 321 aa12.34□□□□□ -0.43
PPP4R1-220ENST00000581835 FBXO46Q6PJ61 603 aaPredicted RBP12.34□□□□□ -0.43
PPP4R1-220ENST00000581835 CHD1LQ86WJ1 897 aa12.34□□□□□ -0.43
PPP4R1-220ENST00000581835 FSD1Q9BTV5 496 aa12.34□□□□□ -0.43
PPP4R1-220ENST00000581835 EFCC1Q9HA90 598 aa12.34□□□□□ -0.43
PPP4R1-220ENST00000581835 CPA4Q9UI42 421 aa12.34□□□□□ -0.43
PPP4R1-220ENST00000581835 HPS5Q9UPZ3 1129 aa12.34□□□□□ -0.43
PPP4R1-220ENST00000581835 MGAMO43451 1857 aa12.34□□□□□ -0.43
PPP4R1-220ENST00000581835 KIAA0100Q14667 2235 aaKnown RBP12.33□□□□□ -0.44
PPP4R1-220ENST00000581835 GSG1L2A8MUP6 293 aa12.33□□□□□ -0.44
PPP4R1-220ENST00000581835 C19orf81C9J6K1 198 aa12.33□□□□□ -0.44
PPP4R1-220ENST00000581835 USP17L10C9JJH3 530 aa12.33□□□□□ -0.44
PPP4R1-220ENST00000581835 SMIM22K7EJ46 135 aa12.33□□□□□ -0.44
PPP4R1-220ENST00000581835 M0R2C6 588 aa12.33□□□□□ -0.44
PPP4R1-220ENST00000581835 GPAA1O43292 621 aa12.33□□□□□ -0.44
PPP4R1-220ENST00000581835 LACTBP83111 547 aaPredicted RBP12.33□□□□□ -0.44
PPP4R1-220ENST00000581835 NUCB1Q02818 461 aa12.33□□□□□ -0.44
PPP4R1-220ENST00000581835 MTMR2Q13614 643 aa12.33□□□□□ -0.44
PPP4R1-220ENST00000581835 ABCB5Q2M3G0 1257 aa12.33□□□□□ -0.44
PPP4R1-220ENST00000581835 C12orf60Q5U649 245 aa12.33□□□□□ -0.44
PPP4R1-220ENST00000581835 CTR9Q6PD62 1173 aa12.33□□□□□ -0.44
PPP4R1-220ENST00000581835 DYNLL2Q96FJ2 89 aa12.33□□□□□ -0.44
PPP4R1-220ENST00000581835 DDRGK1Q96HY6 314 aa12.33□□□□□ -0.44
PPP4R1-220ENST00000581835 SEC62Q99442 399 aaKnown RBP12.33□□□□□ -0.44
PPP4R1-220ENST00000581835 SWAP70Q9UH65 585 aa12.33□□□□□ -0.44
PPP4R1-220ENST00000581835 TAOK2Q9UL54 1235 aa12.33□□□□□ -0.44
PPP4R1-220ENST00000581835 CYP2D7A0A087X1C5 515 aa12.32□□□□□ -0.44
PPP4R1-220ENST00000581835 BCRP11274 1271 aa12.32□□□□□ -0.44
PPP4R1-220ENST00000581835 GUCY1A2P33402 732 aa12.32□□□□□ -0.44
PPP4R1-220ENST00000581835 RAB3GAP1Q15042 981 aa12.32□□□□□ -0.44
PPP4R1-220ENST00000581835 ARHGEF6Q15052 776 aa12.32□□□□□ -0.44
PPP4R1-220ENST00000581835 ZMYM1Q5SVZ6 1142 aa12.32□□□□□ -0.44
PPP4R1-220ENST00000581835 GIMAP6Q6P9H5 292 aa12.32□□□□□ -0.44
PPP4R1-220ENST00000581835 AMOTL1Q8IY63 956 aa12.32□□□□□ -0.44
PPP4R1-220ENST00000581835 SLC44A5Q8NCS7 719 aa12.32□□□□□ -0.44
PPP4R1-220ENST00000581835 EVI5LQ96CN4 794 aa12.32□□□□□ -0.44
PPP4R1-220ENST00000581835 ARHGAP39Q9C0H5 1083 aa12.32□□□□□ -0.44
PPP4R1-220ENST00000581835 CABP5Q9NP86 173 aa12.32□□□□□ -0.44
PPP4R1-220ENST00000581835 PNMA3Q9UL41 463 aa12.32□□□□□ -0.44
PPP4R1-220ENST00000581835 PTPN22Q9Y2R2 807 aa12.32□□□□□ -0.44
PPP4R1-220ENST00000581835 PATL2C9JE40 543 aaKnown RBP12.31□□□□□ -0.44
PPP4R1-220ENST00000581835 GNAT2P19087 354 aa12.31□□□□□ -0.44
PPP4R1-220ENST00000581835 CTGFP29279 349 aa12.31□□□□□ -0.44
PPP4R1-220ENST00000581835 CDK8P49336 464 aa12.31□□□□□ -0.44
PPP4R1-220ENST00000581835 PABPC4Q13310 644 aaKnown RBP eCLIP12.31□□□□□ -0.44
PPP4R1-220ENST00000581835 KIF22Q14807 665 aa12.31□□□□□ -0.44
PPP4R1-220ENST00000581835 SEPT2Q15019 361 aa12.31□□□□□ -0.44
PPP4R1-220ENST00000581835 SBK1Q52WX2 424 aa12.31□□□□□ -0.44
PPP4R1-220ENST00000581835 C16orf86Q6ZW13 317 aa12.31□□□□□ -0.44
PPP4R1-220ENST00000581835 PLEKHM2Q8IWE5 1019 aa12.31□□□□□ -0.44
PPP4R1-220ENST00000581835 OSBPL3Q9H4L5 887 aa12.31□□□□□ -0.44
PPP4R1-220ENST00000581835 EPB41L4AQ9HCS5 686 aaPredicted RBP12.31□□□□□ -0.44
PPP4R1-220ENST00000581835 EMILIN3Q9NT22 766 aa12.31□□□□□ -0.44
PPP4R1-220ENST00000581835 TMOD4Q9NZQ9 345 aa12.31□□□□□ -0.44
PPP4R1-220ENST00000581835 ARPP21Q9UBL0 812 aaPredicted RBP12.31□□□□□ -0.44
PPP4R1-220ENST00000581835 MPHOSPH10O00566 681 aaKnown RBP12.3□□□□□ -0.44
PPP4R1-220ENST00000581835 HOXA7P31268 230 aaPredicted RBP12.3□□□□□ -0.44
PPP4R1-220ENST00000581835 USP17L2Q6R6M4 530 aa12.3□□□□□ -0.44
PPP4R1-220ENST00000581835 ACER1Q8TDN7 264 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms