RNA–Protein interactions for RNA: ENST00000581108.5

CSNK1D-216, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-216ENST00000581108 MYPNQ86TC9 1320 aa25.84■■□□□ 1.73
CSNK1D-216ENST00000581108 RAET1EQ8TD07 263 aa25.83■■□□□ 1.73
CSNK1D-216ENST00000581108 PNMA3Q9UL41 463 aa25.83■■□□□ 1.73
CSNK1D-216ENST00000581108 DOCK3Q8IZD9 2030 aa25.83■■□□□ 1.73
CSNK1D-216ENST00000581108 ZNF532Q9HCE3 1301 aa25.83■■□□□ 1.73
CSNK1D-216ENST00000581108 SMARCA5O60264 1052 aaPredicted RBP25.82■■□□□ 1.72
CSNK1D-216ENST00000581108 ATP5JP18859 108 aa25.82■■□□□ 1.72
CSNK1D-216ENST00000581108 BACE1P56817 501 aa25.82■■□□□ 1.72
CSNK1D-216ENST00000581108 PRKCZQ05513 592 aa25.82■■□□□ 1.72
CSNK1D-216ENST00000581108 MTMR2Q13614 643 aa25.82■■□□□ 1.72
CSNK1D-216ENST00000581108 ANKRD13CQ8N6S4 541 aa25.82■■□□□ 1.72
CSNK1D-216ENST00000581108 LRRCC1Q9C099 1032 aa25.82■■□□□ 1.72
CSNK1D-216ENST00000581108 ZBTB21Q9ULJ3 1066 aa25.82■■□□□ 1.72
CSNK1D-216ENST00000581108 GABRQQ9UN88 632 aa25.82■■□□□ 1.72
CSNK1D-216ENST00000581108 TCRBV5S4A2TA0A5A2 114 aa25.81■■□□□ 1.72
CSNK1D-216ENST00000581108 TTC6Q86TZ1 520 aa25.81■■□□□ 1.72
CSNK1D-216ENST00000581108 GINM1Q9NU53 330 aa25.81■■□□□ 1.72
CSNK1D-216ENST00000581108 PAG1Q9NWQ8 432 aa25.81■■□□□ 1.72
CSNK1D-216ENST00000581108 SERPINB13Q9UIV8 391 aa25.81■■□□□ 1.72
CSNK1D-216ENST00000581108 GRK4P32298 578 aa25.8■■□□□ 1.72
CSNK1D-216ENST00000581108 PABPC4Q13310 644 aaKnown RBP eCLIP25.8■■□□□ 1.72
CSNK1D-216ENST00000581108 TATDN1Q6P1N9 297 aa25.8■■□□□ 1.72
CSNK1D-216ENST00000581108 ASCC2Q9H1I8 757 aaPredicted RBP25.8■■□□□ 1.72
CSNK1D-216ENST00000581108 EHD4Q9H223 541 aa25.8■■□□□ 1.72
CSNK1D-216ENST00000581108 GH2P01242 217 aa25.79■■□□□ 1.72
CSNK1D-216ENST00000581108 PLCD1P51178 756 aa25.79■■□□□ 1.72
CSNK1D-216ENST00000581108 SLFNL1Q499Z3 407 aa25.79■■□□□ 1.72
CSNK1D-216ENST00000581108 HAUS7Q99871 368 aa25.79■■□□□ 1.72
CSNK1D-216ENST00000581108 CRNKL1Q9BZJ0 848 aaKnown RBP25.79■■□□□ 1.72
CSNK1D-216ENST00000581108 TMOD4Q9NZQ9 345 aa25.79■■□□□ 1.72
CSNK1D-216ENST00000581108 NAV1Q8NEY1 1877 aa25.79■■□□□ 1.72
CSNK1D-216ENST00000581108 C19orf81C9J6K1 198 aa25.78■■□□□ 1.72
CSNK1D-216ENST00000581108 USP17L10C9JJH3 530 aa25.78■■□□□ 1.72
CSNK1D-216ENST00000581108 MTFR1Q15390 333 aa25.78■■□□□ 1.72
CSNK1D-216ENST00000581108 DDX60LQ5H9U9 1706 aaKnown RBP25.77■■□□□ 1.72
CSNK1D-216ENST00000581108 TNPO2O14787 897 aaKnown RBP25.77■■□□□ 1.72
CSNK1D-216ENST00000581108 POLR3DP05423 398 aaPredicted RBP25.77■■□□□ 1.72
CSNK1D-216ENST00000581108 GCLCP48506 637 aaPredicted RBP25.77■■□□□ 1.72
CSNK1D-216ENST00000581108 FAM110CQ1W6H9 321 aa25.77■■□□□ 1.72
CSNK1D-216ENST00000581108 LCORLQ8N3X6 602 aa25.77■■□□□ 1.72
CSNK1D-216ENST00000581108 ADD2P35612 726 aa25.76■■□□□ 1.71
CSNK1D-216ENST00000581108 FLT3LGP49771 235 aa25.76■■□□□ 1.71
CSNK1D-216ENST00000581108 EVX2Q03828 476 aa25.76■■□□□ 1.71
CSNK1D-216ENST00000581108 CERKLQ49MI3 558 aaPredicted RBP25.76■■□□□ 1.71
CSNK1D-216ENST00000581108 PRPF38BQ5VTL8 546 aaKnown RBP25.76■■□□□ 1.71
CSNK1D-216ENST00000581108 SDR42E1Q8WUS8 393 aa25.76■■□□□ 1.71
CSNK1D-216ENST00000581108 DCTPP1Q9H773 170 aa25.76■■□□□ 1.71
CSNK1D-216ENST00000581108 ARMT1Q9H993 441 aa25.76■■□□□ 1.71
CSNK1D-216ENST00000581108 MCM9Q9NXL9 1143 aa25.76■■□□□ 1.71
CSNK1D-216ENST00000581108 MYH7P12883 1935 aa25.76■■□□□ 1.71
CSNK1D-216ENST00000581108 HOXA7P31268 230 aaPredicted RBP25.75■■□□□ 1.71
CSNK1D-216ENST00000581108 P2RX7Q99572 595 aaKnown RBP25.75■■□□□ 1.71
CSNK1D-216ENST00000581108 EMILIN3Q9NT22 766 aa25.75■■□□□ 1.71
CSNK1D-216ENST00000581108 BIN2Q9UBW5 565 aaPredicted RBP25.75■■□□□ 1.71
CSNK1D-216ENST00000581108 CHGBP05060 677 aa25.74■■□□□ 1.71
CSNK1D-216ENST00000581108 SHMT1P34896 483 aa25.74■■□□□ 1.71
CSNK1D-216ENST00000581108 IRX3P78415 501 aaPredicted RBP25.74■■□□□ 1.71
CSNK1D-216ENST00000581108 ABCB5Q2M3G0 1257 aa25.74■■□□□ 1.71
CSNK1D-216ENST00000581108 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.74■■□□□ 1.71
CSNK1D-216ENST00000581108 DCP1AQ9NPI6 582 aaPredicted RBP25.74■■□□□ 1.71
CSNK1D-216ENST00000581108 PRKAB2O43741 272 aa25.73■■□□□ 1.71
CSNK1D-216ENST00000581108 ADCY3O60266 1144 aa25.73■■□□□ 1.71
CSNK1D-216ENST00000581108 RAB3GAP1Q15042 981 aa25.73■■□□□ 1.71
CSNK1D-216ENST00000581108 SLAIN1Q8ND83 568 aa25.73■■□□□ 1.71
CSNK1D-216ENST00000581108 COA7Q96BR5 231 aa25.73■■□□□ 1.71
CSNK1D-216ENST00000581108 BAZ2AQ9UIF9 1905 aaKnown RBP25.73■■□□□ 1.71
CSNK1D-216ENST00000581108 MBD4O95243 580 aa25.72■■□□□ 1.71
CSNK1D-216ENST00000581108 ELNP15502 786 aa25.72■■□□□ 1.71
CSNK1D-216ENST00000581108 GABPAQ06546 454 aa25.72■■□□□ 1.71
CSNK1D-216ENST00000581108 USP17L2Q6R6M4 530 aa25.72■■□□□ 1.71
CSNK1D-216ENST00000581108 PEX10O60683 326 aa25.71■■□□□ 1.71
CSNK1D-216ENST00000581108 CYP2D6P10635 497 aa25.71■■□□□ 1.71
CSNK1D-216ENST00000581108 CCL5P13501 91 aa25.71■■□□□ 1.71
CSNK1D-216ENST00000581108 ZYXQ15942 572 aaKnown RBP25.71■■□□□ 1.71
CSNK1D-216ENST00000581108 CABP5Q9NP86 173 aa25.71■■□□□ 1.71
CSNK1D-216ENST00000581108 ECHDC1Q9NTX5 307 aa25.71■■□□□ 1.71
CSNK1D-216ENST00000581108 MORF4L1Q9UBU8 362 aa25.71■■□□□ 1.71
CSNK1D-216ENST00000581108 PCDHB15Q9Y5E8 787 aa25.71■■□□□ 1.71
CSNK1D-216ENST00000581108 HERVK_113P62684 666 aa25.7■■□□□ 1.7
CSNK1D-216ENST00000581108 UBXN2AP68543 259 aa25.7■■□□□ 1.7
CSNK1D-216ENST00000581108 IRF5Q13568 498 aa25.7■■□□□ 1.7
CSNK1D-216ENST00000581108 UBE3CQ15386 1083 aa25.7■■□□□ 1.7
CSNK1D-216ENST00000581108 ACER1Q8TDN7 264 aa25.7■■□□□ 1.7
CSNK1D-216ENST00000581108 RNF208Q9H0X6 261 aa25.7■■□□□ 1.7
CSNK1D-216ENST00000581108 TAOK2Q9UL54 1235 aa25.7■■□□□ 1.7
CSNK1D-216ENST00000581108 GUCY1A2P33402 732 aa25.69■■□□□ 1.7
CSNK1D-216ENST00000581108 PXYLP1Q8TE99 480 aa25.69■■□□□ 1.7
CSNK1D-216ENST00000581108 FEZ1Q99689 392 aa25.69■■□□□ 1.7
CSNK1D-216ENST00000581108 TXNRD2Q9NNW7 524 aa25.69■■□□□ 1.7
CSNK1D-216ENST00000581108 RBPJLQ9UBG7 517 aa25.69■■□□□ 1.7
CSNK1D-216ENST00000581108 C12orf42Q96LP6 360 aa25.68■■□□□ 1.7
CSNK1D-216ENST00000581108 ATP8A2Q9NTI2 1148 aa25.68■■□□□ 1.7
CSNK1D-216ENST00000581108 MYH8P13535 1937 aa25.68■■□□□ 1.7
CSNK1D-216ENST00000581108 GJB1P08034 283 aa25.67■■□□□ 1.7
CSNK1D-216ENST00000581108 RRP1P56182 461 aaKnown RBP25.67■■□□□ 1.7
CSNK1D-216ENST00000581108 SEPT2Q15019 361 aa25.67■■□□□ 1.7
CSNK1D-216ENST00000581108 TSHZ3Q63HK5 1081 aa25.67■■□□□ 1.7
CSNK1D-216ENST00000581108 ZSCAN25Q6NSZ9 544 aa25.67■■□□□ 1.7
CSNK1D-216ENST00000581108 POTEEQ6S8J3 1075 aa25.67■■□□□ 1.7
CSNK1D-216ENST00000581108 SLC44A5Q8NCS7 719 aa25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms