RNA–Protein interactions for RNA: ENST00000581068.5

SKA2-206, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-206ENST00000581068 ZSCAN29Q8IWY8 852 aaPredicted RBP12.96□□□□□ -0.33
SKA2-206ENST00000581068 ZFPM1Q8IX07 1006 aa12.96□□□□□ -0.33
SKA2-206ENST00000581068 FAM151AQ8WW52 585 aa12.96□□□□□ -0.33
SKA2-206ENST00000581068 ZKSCAN3Q9BRR0 538 aa12.96□□□□□ -0.33
SKA2-206ENST00000581068 PI4KBQ9UBF8 816 aa12.96□□□□□ -0.33
SKA2-206ENST00000581068 SERPINB13Q9UIV8 391 aa12.96□□□□□ -0.33
SKA2-206ENST00000581068 BRPF3Q9ULD4 1205 aa12.96□□□□□ -0.33
SKA2-206ENST00000581068 SMC3Q9UQE7 1217 aa12.96□□□□□ -0.33
SKA2-206ENST00000581068 COL2A1P02458 1487 aaPredicted RBP12.96□□□□□ -0.34
SKA2-206ENST00000581068 SHTN1A0MZ66 631 aa12.95□□□□□ -0.34
SKA2-206ENST00000581068 TCP10L2B9ZVM9 353 aa12.95□□□□□ -0.34
SKA2-206ENST00000581068 WNT10BO00744 389 aa12.95□□□□□ -0.34
SKA2-206ENST00000581068 RASA1P20936 1047 aa12.95□□□□□ -0.34
SKA2-206ENST00000581068 SEC23AQ15436 765 aa12.95□□□□□ -0.34
SKA2-206ENST00000581068 RBM26Q5T8P6 1007 aaKnown RBP12.95□□□□□ -0.34
SKA2-206ENST00000581068 SLC44A5Q8NCS7 719 aa12.95□□□□□ -0.34
SKA2-206ENST00000581068 GTF3C6Q969F1 213 aa12.95□□□□□ -0.34
SKA2-206ENST00000581068 TCP11L1Q9NUJ3 509 aa12.95□□□□□ -0.34
SKA2-206ENST00000581068 SBF1O95248 1867 aa12.95□□□□□ -0.34
SKA2-206ENST00000581068 TNKSO95271 1327 aa12.94□□□□□ -0.34
SKA2-206ENST00000581068 DDTLA6NHG4 134 aaPredicted RBP12.94□□□□□ -0.34
SKA2-206ENST00000581068 GOLGA8BA8MQT2 603 aa12.94□□□□□ -0.34
SKA2-206ENST00000581068 TSPY3P0CV98 308 aa12.94□□□□□ -0.34
SKA2-206ENST00000581068 TSPY8P0CW00 308 aa12.94□□□□□ -0.34
SKA2-206ENST00000581068 TNNI2P48788 182 aa12.94□□□□□ -0.34
SKA2-206ENST00000581068 ST3GAL1Q11201 340 aa12.94□□□□□ -0.34
SKA2-206ENST00000581068 SCRN1Q12765 414 aa12.94□□□□□ -0.34
SKA2-206ENST00000581068 NBPF9Q3BBW0 867 aa12.94□□□□□ -0.34
SKA2-206ENST00000581068 SH3BP5LQ7L8J4 393 aa12.94□□□□□ -0.34
SKA2-206ENST00000581068 FAM83AQ86UY5 434 aa12.94□□□□□ -0.34
SKA2-206ENST00000581068 CRACR2BQ8N4Y2 399 aaPredicted RBP12.94□□□□□ -0.34
SKA2-206ENST00000581068 NEDD1Q8NHV4 660 aa12.94□□□□□ -0.34
SKA2-206ENST00000581068 LLPHQ9BRT6 129 aaKnown RBP12.94□□□□□ -0.34
SKA2-206ENST00000581068 TRIM34Q9BYJ4 488 aa12.94□□□□□ -0.34
SKA2-206ENST00000581068 VEZTQ9HBM0 779 aa12.94□□□□□ -0.34
SKA2-206ENST00000581068 GPRC5DQ9NZD1 345 aa12.94□□□□□ -0.34
SKA2-206ENST00000581068 SLC12A7Q9Y666 1083 aa12.94□□□□□ -0.34
SKA2-206ENST00000581068 ATRNL1Q5VV63 1379 aa12.94□□□□□ -0.34
SKA2-206ENST00000581068 ZBTB43O43298 467 aa12.93□□□□□ -0.34
SKA2-206ENST00000581068 DHX16O60231 1041 aaKnown RBP12.93□□□□□ -0.34
SKA2-206ENST00000581068 RCAN1P53805 252 aa12.93□□□□□ -0.34
SKA2-206ENST00000581068 CCT2P78371 535 aaKnown RBP12.93□□□□□ -0.34
SKA2-206ENST00000581068 KIF4BQ2VIQ3 1234 aa12.93□□□□□ -0.34
SKA2-206ENST00000581068 TBC1D10BQ4KMP7 808 aaPredicted RBP12.93□□□□□ -0.34
SKA2-206ENST00000581068 IFIT1BQ5T764 474 aaKnown RBP12.93□□□□□ -0.34
SKA2-206ENST00000581068 APOA5Q6Q788 366 aa12.93□□□□□ -0.34
SKA2-206ENST00000581068 SAMD7Q7Z3H4 446 aa12.93□□□□□ -0.34
SKA2-206ENST00000581068 DGKHQ86XP1 1220 aa12.93□□□□□ -0.34
SKA2-206ENST00000581068 ENAHQ8N8S7 591 aaPredicted RBP12.93□□□□□ -0.34
SKA2-206ENST00000581068 ANKS1AQ92625 1134 aa12.93□□□□□ -0.34
SKA2-206ENST00000581068 CCDC17Q96LX7 622 aa12.93□□□□□ -0.34
SKA2-206ENST00000581068 SENP2Q9HC62 589 aa12.93□□□□□ -0.34
SKA2-206ENST00000581068 HPS5Q9UPZ3 1129 aa12.93□□□□□ -0.34
SKA2-206ENST00000581068 DDNO94850 711 aaPredicted RBP12.92□□□□□ -0.34
SKA2-206ENST00000581068 MYCNP04198 464 aaPredicted RBP12.92□□□□□ -0.34
SKA2-206ENST00000581068 LMOD1P29536 600 aaPredicted RBP12.92□□□□□ -0.34
SKA2-206ENST00000581068 SHMT1P34896 483 aa12.92□□□□□ -0.34
SKA2-206ENST00000581068 METAP2P50579 478 aaKnown RBP eCLIP12.92□□□□□ -0.34
SKA2-206ENST00000581068 NUCB2P80303 420 aa12.92□□□□□ -0.34
SKA2-206ENST00000581068 TNFAIP1Q13829 316 aa12.92□□□□□ -0.34
SKA2-206ENST00000581068 DPY19L2Q6NUT2 758 aa12.92□□□□□ -0.34
SKA2-206ENST00000581068 CATIPQ7Z7H3 387 aa12.92□□□□□ -0.34
SKA2-206ENST00000581068 METTL16Q86W50 562 aaKnown RBP12.92□□□□□ -0.34
SKA2-206ENST00000581068 CNTNAP1P78357 1384 aa12.92□□□□□ -0.34
SKA2-206ENST00000581068 ZC3H4Q9UPT8 1303 aaKnown RBP12.91□□□□□ -0.34
SKA2-206ENST00000581068 GOLGA8AA7E2F4 631 aa12.91□□□□□ -0.34
SKA2-206ENST00000581068 NMT2O60551 498 aa12.91□□□□□ -0.34
SKA2-206ENST00000581068 EGFRP00533 1210 aa12.91□□□□□ -0.34
SKA2-206ENST00000581068 CALM1P0DP23 149 aa12.91□□□□□ -0.34
SKA2-206ENST00000581068 CALM2P0DP24 149 aa12.91□□□□□ -0.34
SKA2-206ENST00000581068 CALM3P0DP25 149 aa12.91□□□□□ -0.34
SKA2-206ENST00000581068 GJB2P29033 226 aa12.91□□□□□ -0.34
SKA2-206ENST00000581068 PPP2R5BQ15173 497 aa12.91□□□□□ -0.34
SKA2-206ENST00000581068 CPLX2Q6PUV4 134 aaKnown RBP12.91□□□□□ -0.34
SKA2-206ENST00000581068 ZNF654Q8IZM8 581 aa12.91□□□□□ -0.34
SKA2-206ENST00000581068 CSRNP1Q96S65 589 aa12.91□□□□□ -0.34
SKA2-206ENST00000581068 NCOA5Q9HCD5 579 aaKnown RBP12.91□□□□□ -0.34
SKA2-206ENST00000581068 IL17RBQ9NRM6 502 aa12.91□□□□□ -0.34
SKA2-206ENST00000581068 HERC5Q9UII4 1024 aaKnown RBP12.91□□□□□ -0.34
SKA2-206ENST00000581068 CCDC196A0A1B0GTZ2 297 aa12.9□□□□□ -0.34
SKA2-206ENST00000581068 CPLX1O14810 134 aa12.9□□□□□ -0.34
SKA2-206ENST00000581068 DDAH1O94760 285 aa12.9□□□□□ -0.34
SKA2-206ENST00000581068 PDIA4P13667 645 aaKnown RBP12.9□□□□□ -0.34
SKA2-206ENST00000581068 AKR1B1P15121 316 aa12.9□□□□□ -0.34
SKA2-206ENST00000581068 EPS15P42566 896 aa12.9□□□□□ -0.34
SKA2-206ENST00000581068 HMGN5P82970 282 aaKnown RBP12.9□□□□□ -0.34
SKA2-206ENST00000581068 CERKLQ49MI3 558 aaPredicted RBP12.9□□□□□ -0.34
SKA2-206ENST00000581068 PPP4R3BQ5MIZ7 849 aa12.9□□□□□ -0.34
SKA2-206ENST00000581068 RCSD1Q6JBY9 416 aa12.9□□□□□ -0.34
SKA2-206ENST00000581068 TATDN1Q6P1N9 297 aa12.9□□□□□ -0.34
SKA2-206ENST00000581068 MICU3Q86XE3 530 aa12.9□□□□□ -0.34
SKA2-206ENST00000581068 RAB11FIP4Q86YS3 637 aa12.9□□□□□ -0.34
SKA2-206ENST00000581068 NSUN7Q8NE18 718 aaKnown RBP12.9□□□□□ -0.34
SKA2-206ENST00000581068 SMARCC2Q8TAQ2 1214 aa12.9□□□□□ -0.34
SKA2-206ENST00000581068 KAT14Q9H8E8 782 aa12.9□□□□□ -0.34
SKA2-206ENST00000581068 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.9□□□□□ -0.34
SKA2-206ENST00000581068 HACL1Q9UJ83 578 aa12.9□□□□□ -0.34
SKA2-206ENST00000581068 NID2Q14112 1375 aa12.9□□□□□ -0.34
SKA2-206ENST00000581068 PLIN4Q96Q06 1357 aa12.9□□□□□ -0.34
SKA2-206ENST00000581068 TBC1D12O60347 775 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms