RNA–Protein interactions for RNA: ENST00000580972.1

RNU4ATAC-201, Transcript of RNA, U4atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU4ATAC, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC-201ENST00000580972 PRAMEF18Q5VWM3 479 aa7.22□□□□□ -1.25
RNU4ATAC-201ENST00000580972 CDC37L1Q7L3B6 337 aa7.22□□□□□ -1.25
RNU4ATAC-201ENST00000580972 SGMS1Q86VZ5 419 aa7.22□□□□□ -1.25
RNU4ATAC-201ENST00000580972 ZSCAN29Q8IWY8 852 aaPredicted RBP7.22□□□□□ -1.25
RNU4ATAC-201ENST00000580972 ZNF654Q8IZM8 581 aa7.22□□□□□ -1.25
RNU4ATAC-201ENST00000580972 FBXL16Q8N461 479 aa7.22□□□□□ -1.25
RNU4ATAC-201ENST00000580972 SMARCC2Q8TAQ2 1214 aa7.22□□□□□ -1.25
RNU4ATAC-201ENST00000580972 PHKBQ93100 1093 aa7.22□□□□□ -1.25
RNU4ATAC-201ENST00000580972 ZNF274Q96GC6 653 aaPredicted RBP7.22□□□□□ -1.25
RNU4ATAC-201ENST00000580972 TMEM87BQ96K49 555 aa7.22□□□□□ -1.25
RNU4ATAC-201ENST00000580972 MRIQ9BWK5 157 aa7.22□□□□□ -1.25
RNU4ATAC-201ENST00000580972 IDI2Q9BXS1 227 aa7.22□□□□□ -1.25
RNU4ATAC-201ENST00000580972 MKNK2Q9HBH9 465 aa7.22□□□□□ -1.25
RNU4ATAC-201ENST00000580972 MYOZ2Q9NPC6 264 aa7.22□□□□□ -1.25
RNU4ATAC-201ENST00000580972 HDAC9Q9UKV0 1011 aa7.22□□□□□ -1.25
RNU4ATAC-201ENST00000580972 CIZ1Q9ULV3 898 aaPredicted RBP7.22□□□□□ -1.25
RNU4ATAC-201ENST00000580972 MTMR6Q9Y217 621 aa7.22□□□□□ -1.25
RNU4ATAC-201ENST00000580972 MAST2Q6P0Q8 1798 aa7.22□□□□□ -1.25
RNU4ATAC-201ENST00000580972 MYO3BQ8WXR4 1341 aa7.22□□□□□ -1.25
RNU4ATAC-201ENST00000580972 KIF13BQ9NQT8 1826 aa7.22□□□□□ -1.25
RNU4ATAC-201ENST00000580972 DLEC1Q9Y238 1755 aa7.21□□□□□ -1.25
RNU4ATAC-201ENST00000580972 SCN9AQ15858 1988 aa7.21□□□□□ -1.26
RNU4ATAC-201ENST00000580972 VPS37CA5D8V6 355 aaPredicted RBP7.21□□□□□ -1.26
RNU4ATAC-201ENST00000580972 CCDC69A6NI79 296 aa7.21□□□□□ -1.26
RNU4ATAC-201ENST00000580972 ZBTB43O43298 467 aa7.21□□□□□ -1.26
RNU4ATAC-201ENST00000580972 SLC3A2P08195 630 aaKnown RBP7.21□□□□□ -1.26
RNU4ATAC-201ENST00000580972 LIFRP42702 1097 aa7.21□□□□□ -1.26
RNU4ATAC-201ENST00000580972 METAP2P50579 478 aaKnown RBP eCLIP7.21□□□□□ -1.26
RNU4ATAC-201ENST00000580972 HIRAP54198 1017 aaPredicted RBP7.21□□□□□ -1.26
RNU4ATAC-201ENST00000580972 PDE4BQ07343 736 aa7.21□□□□□ -1.26
RNU4ATAC-201ENST00000580972 TNIP1Q15025 636 aa7.21□□□□□ -1.26
RNU4ATAC-201ENST00000580972 IFIT1BQ5T764 474 aaKnown RBP7.21□□□□□ -1.26
RNU4ATAC-201ENST00000580972 FAM173BQ6P4H8 233 aa7.21□□□□□ -1.26
RNU4ATAC-201ENST00000580972 CCDC84Q86UT8 332 aaPredicted RBP7.21□□□□□ -1.26
RNU4ATAC-201ENST00000580972 FERMT3Q86UX7 667 aa7.21□□□□□ -1.26
RNU4ATAC-201ENST00000580972 CERS3Q8IU89 383 aa7.21□□□□□ -1.26
RNU4ATAC-201ENST00000580972 AMOTL1Q8IY63 956 aa7.21□□□□□ -1.26
RNU4ATAC-201ENST00000580972 LRRC47Q8N1G4 583 aaKnown RBP7.21□□□□□ -1.26
RNU4ATAC-201ENST00000580972 CCDC82Q8N4S0 544 aa7.21□□□□□ -1.26
RNU4ATAC-201ENST00000580972 PIBF1Q8WXW3 757 aa7.21□□□□□ -1.26
RNU4ATAC-201ENST00000580972 SHISA4Q96DD7 197 aa7.21□□□□□ -1.26
RNU4ATAC-201ENST00000580972 CEP95Q96GE4 821 aa7.21□□□□□ -1.26
RNU4ATAC-201ENST00000580972 CPVLQ9H3G5 476 aa7.21□□□□□ -1.26
RNU4ATAC-201ENST00000580972 CWC22Q9HCG8 908 aaKnown RBP7.21□□□□□ -1.26
RNU4ATAC-201ENST00000580972 CNOT7Q9UIV1 285 aaKnown RBP7.21□□□□□ -1.26
RNU4ATAC-201ENST00000580972 FZD1Q9UP38 647 aa7.21□□□□□ -1.26
RNU4ATAC-201ENST00000580972 SLC12A7Q9Y666 1083 aa7.21□□□□□ -1.26
RNU4ATAC-201ENST00000580972 MYO5AQ9Y4I1 1855 aaKnown RBP7.21□□□□□ -1.26
RNU4ATAC-201ENST00000580972 IGKV6D-41A0A0C4DH26 115 aa7.2□□□□□ -1.26
RNU4ATAC-201ENST00000580972 MPHOSPH10O00566 681 aaKnown RBP7.2□□□□□ -1.26
RNU4ATAC-201ENST00000580972 HLA-DOAP06340 250 aa7.2□□□□□ -1.26
RNU4ATAC-201ENST00000580972 TSPY3P0CV98 308 aa7.2□□□□□ -1.26
RNU4ATAC-201ENST00000580972 TSPY8P0CW00 308 aa7.2□□□□□ -1.26
RNU4ATAC-201ENST00000580972 VEGFAP15692 232 aaPredicted RBP7.2□□□□□ -1.26
RNU4ATAC-201ENST00000580972 FUT2Q10981 343 aa7.2□□□□□ -1.26
RNU4ATAC-201ENST00000580972 NTRK3Q16288 839 aa7.2□□□□□ -1.26
RNU4ATAC-201ENST00000580972 GPR162Q16538 588 aa7.2□□□□□ -1.26
RNU4ATAC-201ENST00000580972 RTN1Q16799 776 aa7.2□□□□□ -1.26
RNU4ATAC-201ENST00000580972 KIF4BQ2VIQ3 1234 aa7.2□□□□□ -1.26
RNU4ATAC-201ENST00000580972 MIGA2Q7L4E1 593 aa7.2□□□□□ -1.26
RNU4ATAC-201ENST00000580972 NBPF11Q86T75 865 aa7.2□□□□□ -1.26
RNU4ATAC-201ENST00000580972 TTC6Q86TZ1 520 aa7.2□□□□□ -1.26
RNU4ATAC-201ENST00000580972 ZNF444Q8N0Y2 327 aaPredicted RBP7.2□□□□□ -1.26
RNU4ATAC-201ENST00000580972 STAG2Q8N3U4 1231 aa7.2□□□□□ -1.26
RNU4ATAC-201ENST00000580972 OGFOD1Q8N543 542 aa7.2□□□□□ -1.26
RNU4ATAC-201ENST00000580972 MTMR14Q8NCE2 650 aa7.2□□□□□ -1.26
RNU4ATAC-201ENST00000580972 NEDD1Q8NHV4 660 aa7.2□□□□□ -1.26
RNU4ATAC-201ENST00000580972 CSRNP1Q96S65 589 aa7.2□□□□□ -1.26
RNU4ATAC-201ENST00000580972 TMEM47Q9BQJ4 181 aa7.2□□□□□ -1.26
RNU4ATAC-201ENST00000580972 ORC3Q9UBD5 711 aaPredicted RBP7.2□□□□□ -1.26
RNU4ATAC-201ENST00000580972 PGAP2Q9UHJ9 254 aa7.2□□□□□ -1.26
RNU4ATAC-201ENST00000580972 SERPINB13Q9UIV8 391 aa7.2□□□□□ -1.26
RNU4ATAC-201ENST00000580972 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.2□□□□□ -1.26
RNU4ATAC-201ENST00000580972 ATRNL1Q5VV63 1379 aa7.2□□□□□ -1.26
RNU4ATAC-201ENST00000580972 ERICH2A1L162 156 aa7.19□□□□□ -1.26
RNU4ATAC-201ENST00000580972 KIF28PB7ZC32 967 aa7.19□□□□□ -1.26
RNU4ATAC-201ENST00000580972 ADAMTS3O15072 1205 aa7.19□□□□□ -1.26
RNU4ATAC-201ENST00000580972 STX6O43752 255 aa7.19□□□□□ -1.26
RNU4ATAC-201ENST00000580972 ENTPD3O75355 529 aa7.19□□□□□ -1.26
RNU4ATAC-201ENST00000580972 BAG4O95429 457 aaKnown RBP7.19□□□□□ -1.26
RNU4ATAC-201ENST00000580972 GOLGA8HP0CJ92 632 aa7.19□□□□□ -1.26
RNU4ATAC-201ENST00000580972 ZSCAN22P10073 491 aaPredicted RBP7.19□□□□□ -1.26
RNU4ATAC-201ENST00000580972 PCP11498 1178 aaKnown RBP7.19□□□□□ -1.26
RNU4ATAC-201ENST00000580972 RPS12P25398 132 aaKnown RBP7.19□□□□□ -1.26
RNU4ATAC-201ENST00000580972 ATP2B2Q01814 1243 aa7.19□□□□□ -1.26
RNU4ATAC-201ENST00000580972 TROAPQ12815 778 aa7.19□□□□□ -1.26
RNU4ATAC-201ENST00000580972 RESTQ13127 1097 aa7.19□□□□□ -1.26
RNU4ATAC-201ENST00000580972 RASA3Q14644 834 aa7.19□□□□□ -1.26
RNU4ATAC-201ENST00000580972 SEPT2Q15019 361 aa7.19□□□□□ -1.26
RNU4ATAC-201ENST00000580972 SART3Q15020 963 aaKnown RBP7.19□□□□□ -1.26
RNU4ATAC-201ENST00000580972 LARP1BQ659C4 914 aaKnown RBP7.19□□□□□ -1.26
RNU4ATAC-201ENST00000580972 IQCA1Q86XH1 822 aa7.19□□□□□ -1.26
RNU4ATAC-201ENST00000580972 SIAH1Q8IUQ4 282 aa7.19□□□□□ -1.26
RNU4ATAC-201ENST00000580972 CRACR2BQ8N4Y2 399 aaPredicted RBP7.19□□□□□ -1.26
RNU4ATAC-201ENST00000580972 SRBD1Q8N5C6 995 aaKnown RBP7.19□□□□□ -1.26
RNU4ATAC-201ENST00000580972 FAM151AQ8WW52 585 aa7.19□□□□□ -1.26
RNU4ATAC-201ENST00000580972 SLC26A6Q9BXS9 759 aa7.19□□□□□ -1.26
RNU4ATAC-201ENST00000580972 GDPD2Q9HCC8 539 aa7.19□□□□□ -1.26
RNU4ATAC-201ENST00000580972 GPRC5DQ9NZD1 345 aa7.19□□□□□ -1.26
RNU4ATAC-201ENST00000580972 TMOD2Q9NZR1 351 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms