RNA–Protein interactions for RNA: ENST00000580898.5

PGAP3-207, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 4

Gene PGAP3, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-207ENST00000580898 RHPN1Q8TCX5 695 aa16.52■□□□□ 0.24
PGAP3-207ENST00000580898 GTF3C2Q8WUA4 911 aaPredicted RBP16.52■□□□□ 0.24
PGAP3-207ENST00000580898 KIF1BPQ96EK5 621 aa16.52■□□□□ 0.24
PGAP3-207ENST00000580898 SAP30BPQ9UHR5 308 aaKnown RBP16.52■□□□□ 0.24
PGAP3-207ENST00000580898 MGAMO43451 1857 aa16.52■□□□□ 0.23
PGAP3-207ENST00000580898 INHAP05111 366 aa16.51■□□□□ 0.23
PGAP3-207ENST00000580898 DYNLL1P63167 89 aaKnown RBP16.51■□□□□ 0.23
PGAP3-207ENST00000580898 RRP1BQ14684 758 aaKnown RBP16.51■□□□□ 0.23
PGAP3-207ENST00000580898 HABP4Q5JVS0 413 aaKnown RBP16.51■□□□□ 0.23
PGAP3-207ENST00000580898 MIGA1Q8NAN2 632 aa16.51■□□□□ 0.23
PGAP3-207ENST00000580898 U2AF1L4Q8WU68 220 aaKnown RBP16.51■□□□□ 0.23
PGAP3-207ENST00000580898 SHISA4Q96DD7 197 aa16.51■□□□□ 0.23
PGAP3-207ENST00000580898 DNAJC18Q9H819 358 aa16.51■□□□□ 0.23
PGAP3-207ENST00000580898 ZBTB21Q9ULJ3 1066 aa16.51■□□□□ 0.23
PGAP3-207ENST00000580898 FOCADQ5VW36 1801 aa16.5■□□□□ 0.23
PGAP3-207ENST00000580898 GDF11O95390 407 aa16.5■□□□□ 0.23
PGAP3-207ENST00000580898 IFIT2P09913 472 aaKnown RBP16.5■□□□□ 0.23
PGAP3-207ENST00000580898 ELNP15502 786 aa16.5■□□□□ 0.23
PGAP3-207ENST00000580898 HOXA7P31268 230 aaPredicted RBP16.5■□□□□ 0.23
PGAP3-207ENST00000580898 DPF3Q92784 378 aa16.5■□□□□ 0.23
PGAP3-207ENST00000580898 EHD4Q9H223 541 aa16.5■□□□□ 0.23
PGAP3-207ENST00000580898 MORF4L1Q9UBU8 362 aa16.5■□□□□ 0.23
PGAP3-207ENST00000580898 SERPINB13Q9UIV8 391 aa16.5■□□□□ 0.23
PGAP3-207ENST00000580898 KIAA0100Q14667 2235 aaKnown RBP16.5■□□□□ 0.23
PGAP3-207ENST00000580898 RAB11FIP3O75154 756 aa16.49■□□□□ 0.23
PGAP3-207ENST00000580898 SGPL1O95470 568 aa16.49■□□□□ 0.23
PGAP3-207ENST00000580898 USP17L2Q6R6M4 530 aa16.49■□□□□ 0.23
PGAP3-207ENST00000580898 CCAR1Q8IX12 1150 aaKnown RBP16.49■□□□□ 0.23
PGAP3-207ENST00000580898 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.49■□□□□ 0.23
PGAP3-207ENST00000580898 FEZ1Q99689 392 aa16.49■□□□□ 0.23
PGAP3-207ENST00000580898 UNC93B1Q9H1C4 597 aa16.49■□□□□ 0.23
PGAP3-207ENST00000580898 IL1RAPL2Q9NP60 686 aa16.49■□□□□ 0.23
PGAP3-207ENST00000580898 CABP5Q9NP86 173 aa16.49■□□□□ 0.23
PGAP3-207ENST00000580898 BRCA2P51587 3418 aa16.48■□□□□ 0.23
PGAP3-207ENST00000580898 SIPA1L1O43166 1804 aa16.48■□□□□ 0.23
PGAP3-207ENST00000580898 MAGEB6P1A0A0J9YX57 407 aa16.48■□□□□ 0.23
PGAP3-207ENST00000580898 FARP2O94887 1054 aaPredicted RBP16.48■□□□□ 0.23
PGAP3-207ENST00000580898 HMGCRP04035 888 aa16.48■□□□□ 0.23
PGAP3-207ENST00000580898 USP14P54578 494 aa16.48■□□□□ 0.23
PGAP3-207ENST00000580898 GPRC5AQ8NFJ5 357 aa16.48■□□□□ 0.23
PGAP3-207ENST00000580898 CRNKL1Q9BZJ0 848 aaKnown RBP16.48■□□□□ 0.23
PGAP3-207ENST00000580898 ANTXR1Q9H6X2 564 aa16.48■□□□□ 0.23
PGAP3-207ENST00000580898 GH2P01242 217 aa16.47■□□□□ 0.23
PGAP3-207ENST00000580898 TFRCP02786 760 aaKnown RBP16.47■□□□□ 0.23
PGAP3-207ENST00000580898 POLR3DP05423 398 aaPredicted RBP16.47■□□□□ 0.23
PGAP3-207ENST00000580898 MAPK4P31152 587 aa16.47■□□□□ 0.23
PGAP3-207ENST00000580898 HERVK_113P62684 666 aa16.47■□□□□ 0.23
PGAP3-207ENST00000580898 PDE3AQ14432 1141 aa16.47■□□□□ 0.23
PGAP3-207ENST00000580898 CERKLQ49MI3 558 aaPredicted RBP16.47■□□□□ 0.23
PGAP3-207ENST00000580898 SLC9C2Q5TAH2 1124 aa16.47■□□□□ 0.23
PGAP3-207ENST00000580898 TATDN1Q6P1N9 297 aa16.47■□□□□ 0.23
PGAP3-207ENST00000580898 SOCS4Q8WXH5 440 aa16.47■□□□□ 0.23
PGAP3-207ENST00000580898 CWC22Q9HCG8 908 aaKnown RBP16.47■□□□□ 0.23
PGAP3-207ENST00000580898 COG6Q9Y2V7 657 aa16.47■□□□□ 0.23
PGAP3-207ENST00000580898 NR2E3Q9Y5X4 410 aa16.47■□□□□ 0.23
PGAP3-207ENST00000580898 NDUFB9Q9Y6M9 179 aa16.47■□□□□ 0.23
PGAP3-207ENST00000580898 CDK5RAP2Q96SN8 1893 aa16.46■□□□□ 0.23
PGAP3-207ENST00000580898 APBB1O00213 710 aa16.46■□□□□ 0.23
PGAP3-207ENST00000580898 RAB3GAP1Q15042 981 aa16.46■□□□□ 0.23
PGAP3-207ENST00000580898 ABCB5Q2M3G0 1257 aa16.46■□□□□ 0.23
PGAP3-207ENST00000580898 TRMT44Q8IYL2 757 aaKnown RBP16.46■□□□□ 0.23
PGAP3-207ENST00000580898 DEFB118Q96PH6 123 aa16.46■□□□□ 0.23
PGAP3-207ENST00000580898 DNAJC2Q99543 621 aaKnown RBP16.46■□□□□ 0.23
PGAP3-207ENST00000580898 P2RX7Q99572 595 aaKnown RBP16.46■□□□□ 0.23
PGAP3-207ENST00000580898 NUDT12Q9BQG2 462 aa16.46■□□□□ 0.23
PGAP3-207ENST00000580898 PAK6Q9NQU5 681 aaPredicted RBP16.46■□□□□ 0.23
PGAP3-207ENST00000580898 ZBTB40Q9NUA8 1239 aa16.46■□□□□ 0.23
PGAP3-207ENST00000580898 MKI67P46013 3256 aaKnown RBP16.46■□□□□ 0.22
PGAP3-207ENST00000580898 H0YGN5 161 aa16.45■□□□□ 0.22
PGAP3-207ENST00000580898 JAG1P78504 1218 aa16.45■□□□□ 0.22
PGAP3-207ENST00000580898 UBE2Q1Q7Z7E8 422 aa16.45■□□□□ 0.22
PGAP3-207ENST00000580898 C12orf42Q96LP6 360 aa16.45■□□□□ 0.22
PGAP3-207ENST00000580898 RIOK1Q9BRS2 568 aaKnown RBP16.45■□□□□ 0.22
PGAP3-207ENST00000580898 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.45■□□□□ 0.22
PGAP3-207ENST00000580898 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.45■□□□□ 0.22
PGAP3-207ENST00000580898 HMX1Q9NP08 348 aaPredicted RBP16.45■□□□□ 0.22
PGAP3-207ENST00000580898 RCAN3Q9UKA8 241 aa16.45■□□□□ 0.22
PGAP3-207ENST00000580898 USP17L15C9J2P7 530 aa16.44■□□□□ 0.22
PGAP3-207ENST00000580898 USP17L13C9JLJ4 530 aa16.44■□□□□ 0.22
PGAP3-207ENST00000580898 USP17L11C9JVI0 530 aa16.44■□□□□ 0.22
PGAP3-207ENST00000580898 USP17L18D6R9N7 530 aa16.44■□□□□ 0.22
PGAP3-207ENST00000580898 USP17L22D6RA61 530 aa16.44■□□□□ 0.22
PGAP3-207ENST00000580898 USP17L17D6RBQ6 530 aa16.44■□□□□ 0.22
PGAP3-207ENST00000580898 USP17L19D6RCP7 530 aa16.44■□□□□ 0.22
PGAP3-207ENST00000580898 USP17L20D6RJB6 530 aa16.44■□□□□ 0.22
PGAP3-207ENST00000580898 GOLIM4O00461 696 aa16.44■□□□□ 0.22
PGAP3-207ENST00000580898 PDE6AP16499 860 aa16.44■□□□□ 0.22
PGAP3-207ENST00000580898 ERVK-9P63128 1117 aa16.44■□□□□ 0.22
PGAP3-207ENST00000580898 ERVK-24P63145 666 aa16.44■□□□□ 0.22
PGAP3-207ENST00000580898 CCNA1P78396 465 aa16.44■□□□□ 0.22
PGAP3-207ENST00000580898 USP17L24Q0WX57 530 aa16.44■□□□□ 0.22
PGAP3-207ENST00000580898 AMOTL1Q8IY63 956 aa16.44■□□□□ 0.22
PGAP3-207ENST00000580898 EMILIN3Q9NT22 766 aa16.44■□□□□ 0.22
PGAP3-207ENST00000580898 MYO5AQ9Y4I1 1855 aaKnown RBP16.44■□□□□ 0.22
PGAP3-207ENST00000580898 RPTORQ8N122 1335 aa16.44■□□□□ 0.22
PGAP3-207ENST00000580898 ZNF532Q9HCE3 1301 aa16.44■□□□□ 0.22
PGAP3-207ENST00000580898 MYH1P12882 1939 aa16.43■□□□□ 0.22
PGAP3-207ENST00000580898 GLRX3O76003 335 aaKnown RBP16.43■□□□□ 0.22
PGAP3-207ENST00000580898 ZYXQ15942 572 aaKnown RBP16.43■□□□□ 0.22
PGAP3-207ENST00000580898 ANKLE1Q8NAG6 615 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms