RNA–Protein interactions for RNA: ENST00000580565.1

CSNK1D-214, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-214ENST00000580565 TMOD4Q9NZQ9 345 aa21.3■■□□□ 1
CSNK1D-214ENST00000580565 ZBTB21Q9ULJ3 1066 aa21.3■■□□□ 1
CSNK1D-214ENST00000580565 DDX19BQ9UMR2 479 aa21.3■■□□□ 1
CSNK1D-214ENST00000580565 COG6Q9Y2V7 657 aa21.3■■□□□ 1
CSNK1D-214ENST00000580565 MAST2Q6P0Q8 1798 aa21.3■■□□□ 1
CSNK1D-214ENST00000580565 C19orf81C9J6K1 198 aa21.29■■□□□ 1
CSNK1D-214ENST00000580565 SIRT2Q8IXJ6 389 aa21.29■■□□□ 1
CSNK1D-214ENST00000580565 CLASRPQ8N2M8 674 aaKnown RBP21.29■■□□□ 1
CSNK1D-214ENST00000580565 UNC93B1Q9H1C4 597 aa21.29■■□□□ 1
CSNK1D-214ENST00000580565 USP17L10C9JJH3 530 aa21.28■■□□□ 1
CSNK1D-214ENST00000580565 APBB1O00213 710 aa21.28■■□□□ 1
CSNK1D-214ENST00000580565 HMMRO75330 724 aa21.28■■□□□ 1
CSNK1D-214ENST00000580565 INHAP05111 366 aa21.28■■□□□ 1
CSNK1D-214ENST00000580565 HOXA7P31268 230 aaPredicted RBP21.28■■□□□ 1
CSNK1D-214ENST00000580565 TTF1Q15361 905 aaPredicted RBP21.28■■□□□ 1
CSNK1D-214ENST00000580565 KIF1BPQ96EK5 621 aa21.28■■□□□ 1
CSNK1D-214ENST00000580565 TAOK2Q9UL54 1235 aa21.28■■□□□ 1
CSNK1D-214ENST00000580565 IRX3P78415 501 aaPredicted RBP21.27■■□□□ 1
CSNK1D-214ENST00000580565 HABP4Q5JVS0 413 aaKnown RBP21.27■■□□□ 1
CSNK1D-214ENST00000580565 TATDN1Q6P1N9 297 aa21.27■■□□□ 1
CSNK1D-214ENST00000580565 U2AF1L4Q8WU68 220 aaKnown RBP21.27■■□□□ 1
CSNK1D-214ENST00000580565 P2RX7Q99572 595 aaKnown RBP21.27■■□□□ 1
CSNK1D-214ENST00000580565 MORF4L1Q9UBU8 362 aa21.27■■□□□ 1
CSNK1D-214ENST00000580565 PTPRFP10586 1907 aa21.26■□□□□ 0.99
CSNK1D-214ENST00000580565 GH2P01242 217 aa21.26■□□□□ 0.99
CSNK1D-214ENST00000580565 IFIT2P09913 472 aaKnown RBP21.26■□□□□ 0.99
CSNK1D-214ENST00000580565 UBE2Q1Q7Z7E8 422 aa21.26■□□□□ 0.99
CSNK1D-214ENST00000580565 TTC6Q86TZ1 520 aa21.26■□□□□ 0.99
CSNK1D-214ENST00000580565 RIOK1Q9BRS2 568 aaKnown RBP21.26■□□□□ 0.99
CSNK1D-214ENST00000580565 EHD4Q9H223 541 aa21.26■□□□□ 0.99
CSNK1D-214ENST00000580565 SERPINB13Q9UIV8 391 aa21.26■□□□□ 0.99
CSNK1D-214ENST00000580565 RCAN3Q9UKA8 241 aa21.26■□□□□ 0.99
CSNK1D-214ENST00000580565 MAGEB6P1A0A0J9YX57 407 aa21.25■□□□□ 0.99
CSNK1D-214ENST00000580565 RAB11FIP3O75154 756 aa21.25■□□□□ 0.99
CSNK1D-214ENST00000580565 SGPL1O95470 568 aa21.25■□□□□ 0.99
CSNK1D-214ENST00000580565 SLC9C2Q5TAH2 1124 aa21.25■□□□□ 0.99
CSNK1D-214ENST00000580565 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.25■□□□□ 0.99
CSNK1D-214ENST00000580565 CHMP4BQ9H444 224 aaKnown RBP21.25■□□□□ 0.99
CSNK1D-214ENST00000580565 EMILIN3Q9NT22 766 aa21.25■□□□□ 0.99
CSNK1D-214ENST00000580565 GJD2Q9UKL4 321 aa21.25■□□□□ 0.99
CSNK1D-214ENST00000580565 SIPA1L1O43166 1804 aa21.25■□□□□ 0.99
CSNK1D-214ENST00000580565 LOC285556D6RIA3 1793 aa21.24■□□□□ 0.99
CSNK1D-214ENST00000580565 H0YGN5 161 aa21.24■□□□□ 0.99
CSNK1D-214ENST00000580565 PDE6AP16499 860 aa21.24■□□□□ 0.99
CSNK1D-214ENST00000580565 HERVK_113P62684 666 aa21.24■□□□□ 0.99
CSNK1D-214ENST00000580565 USP17L2Q6R6M4 530 aa21.24■□□□□ 0.99
CSNK1D-214ENST00000580565 BCL11AQ9H165 835 aa21.24■□□□□ 0.99
CSNK1D-214ENST00000580565 GOLIM4O00461 696 aa21.23■□□□□ 0.99
CSNK1D-214ENST00000580565 CERKLQ49MI3 558 aaPredicted RBP21.23■□□□□ 0.99
CSNK1D-214ENST00000580565 GPRC5AQ8NFJ5 357 aa21.23■□□□□ 0.99
CSNK1D-214ENST00000580565 DPF3Q92784 378 aa21.23■□□□□ 0.99
CSNK1D-214ENST00000580565 DNAJC2Q99543 621 aaKnown RBP21.23■□□□□ 0.99
CSNK1D-214ENST00000580565 TFRCP02786 760 aaKnown RBP21.22■□□□□ 0.99
CSNK1D-214ENST00000580565 CAPN2P17655 700 aa21.22■□□□□ 0.99
CSNK1D-214ENST00000580565 PLCD1P51178 756 aa21.22■□□□□ 0.99
CSNK1D-214ENST00000580565 DEFB118Q96PH6 123 aa21.22■□□□□ 0.99
CSNK1D-214ENST00000580565 CRNKL1Q9BZJ0 848 aaKnown RBP21.22■□□□□ 0.99
CSNK1D-214ENST00000580565 TXNRD2Q9NNW7 524 aa21.22■□□□□ 0.99
CSNK1D-214ENST00000580565 PAK6Q9NQU5 681 aaPredicted RBP21.22■□□□□ 0.99
CSNK1D-214ENST00000580565 PCDH10Q9P2E7 1040 aa21.22■□□□□ 0.99
CSNK1D-214ENST00000580565 RBPJLQ9UBG7 517 aa21.22■□□□□ 0.99
CSNK1D-214ENST00000580565 ZNF532Q9HCE3 1301 aa21.22■□□□□ 0.99
CSNK1D-214ENST00000580565 PEX10O60683 326 aa21.21■□□□□ 0.99
CSNK1D-214ENST00000580565 FARP2O94887 1054 aaPredicted RBP21.21■□□□□ 0.99
CSNK1D-214ENST00000580565 POLR3DP05423 398 aaPredicted RBP21.21■□□□□ 0.99
CSNK1D-214ENST00000580565 RAB3GAP1Q15042 981 aa21.21■□□□□ 0.99
CSNK1D-214ENST00000580565 ABCB5Q2M3G0 1257 aa21.21■□□□□ 0.99
CSNK1D-214ENST00000580565 HTATIP2Q9BUP3 242 aa21.21■□□□□ 0.99
CSNK1D-214ENST00000580565 COLQQ9Y215 455 aaPredicted RBP21.21■□□□□ 0.99
CSNK1D-214ENST00000580565 ATAD5Q96QE3 1844 aa21.2■□□□□ 0.98
CSNK1D-214ENST00000580565 MGAMO43451 1857 aa21.2■□□□□ 0.98
CSNK1D-214ENST00000580565 TCRBV5S4A2TA0A5A2 114 aa21.2■□□□□ 0.98
CSNK1D-214ENST00000580565 HMGCRP04035 888 aa21.2■□□□□ 0.98
CSNK1D-214ENST00000580565 SHMT1P34896 483 aa21.2■□□□□ 0.98
CSNK1D-214ENST00000580565 EDC3Q96F86 508 aaKnown RBP21.2■□□□□ 0.98
CSNK1D-214ENST00000580565 C12orf42Q96LP6 360 aa21.2■□□□□ 0.98
CSNK1D-214ENST00000580565 FEZ1Q99689 392 aa21.2■□□□□ 0.98
CSNK1D-214ENST00000580565 MYO5AQ9Y4I1 1855 aaKnown RBP21.2■□□□□ 0.98
CSNK1D-214ENST00000580565 ZYXQ15942 572 aaKnown RBP21.19■□□□□ 0.98
CSNK1D-214ENST00000580565 GTF3C2Q8WUA4 911 aaPredicted RBP21.19■□□□□ 0.98
CSNK1D-214ENST00000580565 KIAA1683Q9H0B3 1180 aa21.19■□□□□ 0.98
CSNK1D-214ENST00000580565 CRISPLD2Q9H0B8 497 aa21.19■□□□□ 0.98
CSNK1D-214ENST00000580565 CABP5Q9NP86 173 aa21.19■□□□□ 0.98
CSNK1D-214ENST00000580565 MCM9Q9NXL9 1143 aa21.19■□□□□ 0.98
CSNK1D-214ENST00000580565 FOCADQ5VW36 1801 aa21.19■□□□□ 0.98
CSNK1D-214ENST00000580565 USP17L15C9J2P7 530 aa21.18■□□□□ 0.98
CSNK1D-214ENST00000580565 USP17L13C9JLJ4 530 aa21.18■□□□□ 0.98
CSNK1D-214ENST00000580565 USP17L11C9JVI0 530 aa21.18■□□□□ 0.98
CSNK1D-214ENST00000580565 USP17L18D6R9N7 530 aa21.18■□□□□ 0.98
CSNK1D-214ENST00000580565 USP17L22D6RA61 530 aa21.18■□□□□ 0.98
CSNK1D-214ENST00000580565 USP17L17D6RBQ6 530 aa21.18■□□□□ 0.98
CSNK1D-214ENST00000580565 USP17L19D6RCP7 530 aa21.18■□□□□ 0.98
CSNK1D-214ENST00000580565 USP17L20D6RJB6 530 aa21.18■□□□□ 0.98
CSNK1D-214ENST00000580565 ATP5JP18859 108 aa21.18■□□□□ 0.98
CSNK1D-214ENST00000580565 MAPK4P31152 587 aa21.18■□□□□ 0.98
CSNK1D-214ENST00000580565 USP14P54578 494 aa21.18■□□□□ 0.98
CSNK1D-214ENST00000580565 GABPAQ06546 454 aa21.18■□□□□ 0.98
CSNK1D-214ENST00000580565 USP17L24Q0WX57 530 aa21.18■□□□□ 0.98
CSNK1D-214ENST00000580565 PDE3AQ14432 1141 aa21.18■□□□□ 0.98
CSNK1D-214ENST00000580565 Q3C1V9 767 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms