RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 USP40Q9NVE5 1235 aa17.3■□□□□ 0.36
CDK5RAP3-218ENST00000580391 PSDA5PKW4 1024 aaPredicted RBP17.29■□□□□ 0.36
CDK5RAP3-218ENST00000580391 UBE2Q2LH0YL09 131 aa17.29■□□□□ 0.36
CDK5RAP3-218ENST00000580391 TFAP4Q01664 338 aa17.29■□□□□ 0.36
CDK5RAP3-218ENST00000580391 C16orf86Q6ZW13 317 aa17.29■□□□□ 0.36
CDK5RAP3-218ENST00000580391 MKNK2Q9HBH9 465 aa17.29■□□□□ 0.36
CDK5RAP3-218ENST00000580391 PIM2Q9P1W9 311 aa17.29■□□□□ 0.36
CDK5RAP3-218ENST00000580391 PPP1R1BQ9UD71 204 aaPredicted RBP17.29■□□□□ 0.36
CDK5RAP3-218ENST00000580391 RASA1P20936 1047 aa17.29■□□□□ 0.36
CDK5RAP3-218ENST00000580391 KRT85P78386 507 aa17.29■□□□□ 0.36
CDK5RAP3-218ENST00000580391 FANCBQ8NB91 859 aa17.29■□□□□ 0.36
CDK5RAP3-218ENST00000580391 ZDHHC15Q96MV8 337 aa17.29■□□□□ 0.36
CDK5RAP3-218ENST00000580391 SGIP1Q9BQI5 828 aa17.29■□□□□ 0.36
CDK5RAP3-218ENST00000580391 STK36Q9NRP7 1315 aa17.29■□□□□ 0.36
CDK5RAP3-218ENST00000580391 BAZ2BQ9UIF8 2168 aaKnown RBP17.28■□□□□ 0.36
CDK5RAP3-218ENST00000580391 IFNAR1P17181 557 aa17.28■□□□□ 0.36
CDK5RAP3-218ENST00000580391 IARSP41252 1262 aaKnown RBP17.28■□□□□ 0.36
CDK5RAP3-218ENST00000580391 CDK8P49336 464 aa17.28■□□□□ 0.36
CDK5RAP3-218ENST00000580391 RCSD1Q6JBY9 416 aa17.28■□□□□ 0.36
CDK5RAP3-218ENST00000580391 CMTR1Q8N1G2 835 aaKnown RBP17.28■□□□□ 0.36
CDK5RAP3-218ENST00000580391 KLHL34Q8N239 644 aa17.28■□□□□ 0.36
CDK5RAP3-218ENST00000580391 LARGE2Q8N3Y3 721 aa17.28■□□□□ 0.36
CDK5RAP3-218ENST00000580391 ALG1Q9BT22 464 aa17.28■□□□□ 0.36
CDK5RAP3-218ENST00000580391 SLC26A6Q9BXS9 759 aa17.28■□□□□ 0.36
CDK5RAP3-218ENST00000580391 ZSCAN16Q9H4T2 348 aaPredicted RBP17.28■□□□□ 0.36
CDK5RAP3-218ENST00000580391 IL17RBQ9NRM6 502 aa17.28■□□□□ 0.36
CDK5RAP3-218ENST00000580391 TROAPQ12815 778 aa17.28■□□□□ 0.36
CDK5RAP3-218ENST00000580391 NFIAQ12857 509 aa17.28■□□□□ 0.36
CDK5RAP3-218ENST00000580391 CAVIN1Q6NZI2 390 aaKnown RBP17.28■□□□□ 0.36
CDK5RAP3-218ENST00000580391 CATIPQ7Z7H3 387 aa17.28■□□□□ 0.36
CDK5RAP3-218ENST00000580391 FBXO18Q8NFZ0 1043 aa17.28■□□□□ 0.36
CDK5RAP3-218ENST00000580391 RBM27Q9P2N5 1060 aaKnown RBP17.28■□□□□ 0.36
CDK5RAP3-218ENST00000580391 TAOK2Q9UL54 1235 aa17.28■□□□□ 0.36
CDK5RAP3-218ENST00000580391 FMNL1O95466 1100 aaPredicted RBP17.27■□□□□ 0.36
CDK5RAP3-218ENST00000580391 MBD3O95983 291 aa17.27■□□□□ 0.36
CDK5RAP3-218ENST00000580391 RBM5P52756 815 aaKnown RBP eCLIP17.27■□□□□ 0.369e-32■■■■□ 20.3
CDK5RAP3-218ENST00000580391 TTC6Q86TZ1 520 aa17.27■□□□□ 0.36
CDK5RAP3-218ENST00000580391 CCDC82Q8N4S0 544 aa17.27■□□□□ 0.36
CDK5RAP3-218ENST00000580391 OSBPL5Q9H0X9 879 aaPredicted RBP17.27■□□□□ 0.36
CDK5RAP3-218ENST00000580391 DDAH1O94760 285 aa17.26■□□□□ 0.35
CDK5RAP3-218ENST00000580391 TSPY3P0CV98 308 aa17.26■□□□□ 0.35
CDK5RAP3-218ENST00000580391 TSPY8P0CW00 308 aa17.26■□□□□ 0.35
CDK5RAP3-218ENST00000580391 NT5C2P49902 561 aa17.26■□□□□ 0.35
CDK5RAP3-218ENST00000580391 CACNB3P54284 484 aa17.26■□□□□ 0.35
CDK5RAP3-218ENST00000580391 HDLBPQ00341 1268 aaKnown RBP17.26■□□□□ 0.35
CDK5RAP3-218ENST00000580391 SSRP1Q08945 709 aaKnown RBP17.26■□□□□ 0.35
CDK5RAP3-218ENST00000580391 NBPF11Q86T75 865 aa17.26■□□□□ 0.35
CDK5RAP3-218ENST00000580391 ZNF444Q8N0Y2 327 aaPredicted RBP17.26■□□□□ 0.35
CDK5RAP3-218ENST00000580391 GREB1LQ9C091 1923 aaPredicted RBP17.26■□□□□ 0.35
CDK5RAP3-218ENST00000580391 ARFGEF1Q9Y6D6 1849 aa17.26■□□□□ 0.35
CDK5RAP3-218ENST00000580391 CCDC196A0A1B0GTZ2 297 aa17.26■□□□□ 0.35
CDK5RAP3-218ENST00000580391 RAD17O75943 681 aa17.26■□□□□ 0.35
CDK5RAP3-218ENST00000580391 GUCY1A2P33402 732 aa17.26■□□□□ 0.35
CDK5RAP3-218ENST00000580391 TPRNQ4KMQ1 711 aa17.26■□□□□ 0.35
CDK5RAP3-218ENST00000580391 DALRD3Q5D0E6 543 aaKnown RBP17.26■□□□□ 0.35
CDK5RAP3-218ENST00000580391 SOGA3Q5TF21 947 aa17.26■□□□□ 0.35
CDK5RAP3-218ENST00000580391 MRIQ9BWK5 157 aa17.26■□□□□ 0.35
CDK5RAP3-218ENST00000580391 TFIP11Q9UBB9 837 aaKnown RBP17.26■□□□□ 0.35
CDK5RAP3-218ENST00000580391 SERPINA10Q9UK55 444 aa17.26■□□□□ 0.35
CDK5RAP3-218ENST00000580391 PSMD14O00487 310 aa17.25■□□□□ 0.35
CDK5RAP3-218ENST00000580391 PLEKHA8P1O95397 391 aa17.25■□□□□ 0.35
CDK5RAP3-218ENST00000580391 ZNF287Q9HBT7 754 aa17.25■□□□□ 0.35
CDK5RAP3-218ENST00000580391 MYH4Q9Y623 1939 aa17.24■□□□□ 0.35
CDK5RAP3-218ENST00000580391 KIF28PB7ZC32 967 aa17.24■□□□□ 0.35
CDK5RAP3-218ENST00000580391 GABPAQ06546 454 aa17.24■□□□□ 0.35
CDK5RAP3-218ENST00000580391 CSPP1Q1MSJ5 1256 aa17.24■□□□□ 0.35
CDK5RAP3-218ENST00000580391 CRACR2BQ8N4Y2 399 aaPredicted RBP17.24■□□□□ 0.35
CDK5RAP3-218ENST00000580391 FTOQ9C0B1 505 aaKnown RBP eCLIP17.24■□□□□ 0.35
CDK5RAP3-218ENST00000580391 TMEM63CQ9P1W3 806 aa17.24■□□□□ 0.35
CDK5RAP3-218ENST00000580391 CALM1P0DP23 149 aa17.24■□□□□ 0.35
CDK5RAP3-218ENST00000580391 CALM2P0DP24 149 aa17.24■□□□□ 0.35
CDK5RAP3-218ENST00000580391 CALM3P0DP25 149 aa17.24■□□□□ 0.35
CDK5RAP3-218ENST00000580391 PTGER2P43116 358 aa17.24■□□□□ 0.35
CDK5RAP3-218ENST00000580391 UBE2HP62256 183 aa17.24■□□□□ 0.35
CDK5RAP3-218ENST00000580391 KIF23Q02241 960 aaPredicted RBP17.24■□□□□ 0.35
CDK5RAP3-218ENST00000580391 KRT40Q6A162 431 aa17.24■□□□□ 0.35
CDK5RAP3-218ENST00000580391 RSBN1LQ6PCB5 846 aaPredicted RBP17.24■□□□□ 0.35
CDK5RAP3-218ENST00000580391 ZFPM1Q8IX07 1006 aa17.24■□□□□ 0.35
CDK5RAP3-218ENST00000580391 TRIM22Q8IYM9 498 aa17.24■□□□□ 0.35
CDK5RAP3-218ENST00000580391 KAT14Q9H8E8 782 aa17.24■□□□□ 0.35
CDK5RAP3-218ENST00000580391 TCP11L1Q9NUJ3 509 aa17.24■□□□□ 0.35
CDK5RAP3-218ENST00000580391 ELP1O95163 1332 aa17.23■□□□□ 0.35
CDK5RAP3-218ENST00000580391 FUT2Q10981 343 aa17.23■□□□□ 0.35
CDK5RAP3-218ENST00000580391 PPP2R5BQ15173 497 aa17.23■□□□□ 0.35
CDK5RAP3-218ENST00000580391 CFAP100Q494V2 611 aa17.23■□□□□ 0.35
CDK5RAP3-218ENST00000580391 DGKHQ86XP1 1220 aa17.23■□□□□ 0.35
CDK5RAP3-218ENST00000580391 LEO1Q8WVC0 666 aaPredicted RBP17.23■□□□□ 0.35
CDK5RAP3-218ENST00000580391 SPATA32Q96LK8 384 aa17.23■□□□□ 0.35
CDK5RAP3-218ENST00000580391 RBM28Q9NW13 759 aaKnown RBP17.23■□□□□ 0.35
CDK5RAP3-218ENST00000580391 MYO3BQ8WXR4 1341 aa17.23■□□□□ 0.35
CDK5RAP3-218ENST00000580391 CNTNAP5Q8WYK1 1306 aa17.23■□□□□ 0.35
CDK5RAP3-218ENST00000580391 TMTC3Q6ZXV5 915 aa17.22■□□□□ 0.35
CDK5RAP3-218ENST00000580391 ILDR2Q71H61 639 aa17.22■□□□□ 0.35
CDK5RAP3-218ENST00000580391 NIM1KQ8IY84 436 aa17.22■□□□□ 0.35
CDK5RAP3-218ENST00000580391 PNMA1Q8ND90 353 aa17.22■□□□□ 0.35
CDK5RAP3-218ENST00000580391 NEDD1Q8NHV4 660 aa17.22■□□□□ 0.35
CDK5RAP3-218ENST00000580391 CTCFLQ8NI51 663 aaPredicted RBP17.22■□□□□ 0.35
CDK5RAP3-218ENST00000580391 ANKS1AQ92625 1134 aa17.22■□□□□ 0.35
CDK5RAP3-218ENST00000580391 SCAND2PQ9GZW5 306 aaPredicted RBP17.22■□□□□ 0.35
CDK5RAP3-218ENST00000580391 TAOK3Q9H2K8 898 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms