RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 PLCG2P16885 1265 aa14.82□□□□□ -0.04
CDK5RAP3-217ENST00000580287 ARHGAP27Q6ZUM4 889 aa14.82□□□□□ -0.04
CDK5RAP3-217ENST00000580287 ESR2Q92731 530 aa14.82□□□□□ -0.04
CDK5RAP3-217ENST00000580287 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.82□□□□□ -0.04
CDK5RAP3-217ENST00000580287 CLRN2A0PK11 232 aa14.81□□□□□ -0.04
CDK5RAP3-217ENST00000580287 PFKFB2O60825 505 aa14.81□□□□□ -0.04
CDK5RAP3-217ENST00000580287 ADD1P35611 737 aaKnown RBP14.81□□□□□ -0.04
CDK5RAP3-217ENST00000580287 TMED8Q6PL24 325 aaPredicted RBP14.81□□□□□ -0.04
CDK5RAP3-217ENST00000580287 ANP32BQ92688 251 aaKnown RBP14.81□□□□□ -0.04
CDK5RAP3-217ENST00000580287 GMLQ99445 158 aa14.81□□□□□ -0.04
CDK5RAP3-217ENST00000580287 MTMR6Q9Y217 621 aa14.81□□□□□ -0.04
CDK5RAP3-217ENST00000580287 FAM196BA6NMK8 535 aa14.81□□□□□ -0.04
CDK5RAP3-217ENST00000580287 MKNK2Q9HBH9 465 aa14.81□□□□□ -0.04
CDK5RAP3-217ENST00000580287 TNKSO95271 1327 aa14.81□□□□□ -0.04
CDK5RAP3-217ENST00000580287 EGFRP00533 1210 aa14.8□□□□□ -0.04
CDK5RAP3-217ENST00000580287 TFAP4Q01664 338 aa14.8□□□□□ -0.04
CDK5RAP3-217ENST00000580287 DNM1Q05193 864 aaKnown RBP14.8□□□□□ -0.04
CDK5RAP3-217ENST00000580287 CCDC173Q0VFZ6 552 aa14.8□□□□□ -0.04
CDK5RAP3-217ENST00000580287 RBM26Q5T8P6 1007 aaKnown RBP14.8□□□□□ -0.04
CDK5RAP3-217ENST00000580287 FAM173BQ6P4H8 233 aa14.8□□□□□ -0.04
CDK5RAP3-217ENST00000580287 CMTR1Q8N1G2 835 aaKnown RBP14.8□□□□□ -0.04
CDK5RAP3-217ENST00000580287 UBAC1Q9BSL1 405 aa14.8□□□□□ -0.04
CDK5RAP3-217ENST00000580287 MAST2Q6P0Q8 1798 aa14.8□□□□□ -0.04
CDK5RAP3-217ENST00000580287 TSPY2A6NKD2 308 aa14.8□□□□□ -0.04
CDK5RAP3-217ENST00000580287 TPM2P07951 284 aa14.8□□□□□ -0.04
CDK5RAP3-217ENST00000580287 FGRP09769 529 aa14.8□□□□□ -0.04
CDK5RAP3-217ENST00000580287 FKBP1AP62942 108 aaKnown RBP14.8□□□□□ -0.04
CDK5RAP3-217ENST00000580287 APOA5Q6Q788 366 aa14.8□□□□□ -0.04
CDK5RAP3-217ENST00000580287 CCDC82Q8N4S0 544 aa14.8□□□□□ -0.04
CDK5RAP3-217ENST00000580287 ENAHQ8N8S7 591 aaPredicted RBP14.8□□□□□ -0.04
CDK5RAP3-217ENST00000580287 ZNF274Q96GC6 653 aaPredicted RBP14.8□□□□□ -0.04
CDK5RAP3-217ENST00000580287 SERPINA10Q9UK55 444 aa14.8□□□□□ -0.04
CDK5RAP3-217ENST00000580287 GJA3Q9Y6H8 435 aa14.8□□□□□ -0.04
CDK5RAP3-217ENST00000580287 UBE2Q2LH0YL09 131 aa14.79□□□□□ -0.04
CDK5RAP3-217ENST00000580287 CDC27P30260 824 aa14.79□□□□□ -0.04
CDK5RAP3-217ENST00000580287 EVCP57679 992 aa14.79□□□□□ -0.04
CDK5RAP3-217ENST00000580287 PDE4BQ07343 736 aa14.79□□□□□ -0.04
CDK5RAP3-217ENST00000580287 WTAPQ15007 396 aa14.79□□□□□ -0.04
CDK5RAP3-217ENST00000580287 LRSAM1Q6UWE0 723 aa14.79□□□□□ -0.04
CDK5RAP3-217ENST00000580287 FBXL16Q8N461 479 aa14.79□□□□□ -0.04
CDK5RAP3-217ENST00000580287 NSUN7Q8NE18 718 aaKnown RBP14.79□□□□□ -0.04
CDK5RAP3-217ENST00000580287 TMEM87BQ96K49 555 aa14.79□□□□□ -0.04
CDK5RAP3-217ENST00000580287 PPP1R9BQ96SB3 815 aa14.79□□□□□ -0.04
CDK5RAP3-217ENST00000580287 FAM198AQ9UFP1 575 aa14.79□□□□□ -0.04
CDK5RAP3-217ENST00000580287 CIAPIN1Q6FI81 312 aa14.79□□□□□ -0.04
CDK5RAP3-217ENST00000580287 CDC37L1Q7L3B6 337 aa14.79□□□□□ -0.04
CDK5RAP3-217ENST00000580287 NUP133Q8WUM0 1156 aa14.79□□□□□ -0.04
CDK5RAP3-217ENST00000580287 SYAP1Q96A49 352 aaPredicted RBP14.79□□□□□ -0.04
CDK5RAP3-217ENST00000580287 ZSCAN10Q96SZ4 725 aaPredicted RBP14.79□□□□□ -0.04
CDK5RAP3-217ENST00000580287 DDTLA6NHG4 134 aaPredicted RBP14.79□□□□□ -0.04
CDK5RAP3-217ENST00000580287 CDK8P49336 464 aa14.79□□□□□ -0.04
CDK5RAP3-217ENST00000580287 OGFOD1Q8N543 542 aa14.79□□□□□ -0.04
CDK5RAP3-217ENST00000580287 OSBPL5Q9H0X9 879 aaPredicted RBP14.79□□□□□ -0.04
CDK5RAP3-217ENST00000580287 IL17RBQ9NRM6 502 aa14.79□□□□□ -0.04
CDK5RAP3-217ENST00000580287 GJB4Q9NTQ9 266 aa14.79□□□□□ -0.04
CDK5RAP3-217ENST00000580287 MTMR7Q9Y216 660 aa14.79□□□□□ -0.04
CDK5RAP3-217ENST00000580287 CCDC69A6NI79 296 aa14.78□□□□□ -0.04
CDK5RAP3-217ENST00000580287 TCP10L2B9ZVM9 353 aa14.78□□□□□ -0.04
CDK5RAP3-217ENST00000580287 SLC3A2P08195 630 aaKnown RBP14.78□□□□□ -0.04
CDK5RAP3-217ENST00000580287 PDCP20941 246 aa14.78□□□□□ -0.04
CDK5RAP3-217ENST00000580287 SEC23AQ15436 765 aa14.78□□□□□ -0.04
CDK5RAP3-217ENST00000580287 SH3BP5LQ7L8J4 393 aa14.78□□□□□ -0.04
CDK5RAP3-217ENST00000580287 ZSCAN29Q8IWY8 852 aaPredicted RBP14.78□□□□□ -0.04
CDK5RAP3-217ENST00000580287 AMOTL1Q8IY63 956 aa14.78□□□□□ -0.04
CDK5RAP3-217ENST00000580287 SLC12A7Q9Y666 1083 aa14.78□□□□□ -0.04
CDK5RAP3-217ENST00000580287 PTPDC1A2A3K4 754 aa14.78□□□□□ -0.04
CDK5RAP3-217ENST00000580287 SHROOM1Q2M3G4 852 aaPredicted RBP14.78□□□□□ -0.04
CDK5RAP3-217ENST00000580287 NBPF9Q3BBW0 867 aa14.78□□□□□ -0.04
CDK5RAP3-217ENST00000580287 PHKBQ93100 1093 aa14.78□□□□□ -0.04
CDK5RAP3-217ENST00000580287 FAM217BQ9NTX9 383 aaPredicted RBP14.78□□□□□ -0.04
CDK5RAP3-217ENST00000580287 WDR19Q8NEZ3 1342 aa14.77□□□□□ -0.04
CDK5RAP3-217ENST00000580287 BRCA1P38398 1863 aaKnown RBP14.77□□□□□ -0.04
CDK5RAP3-217ENST00000580287 ERICH2A1L162 156 aa14.77□□□□□ -0.04
CDK5RAP3-217ENST00000580287 ZBTB43O43298 467 aa14.77□□□□□ -0.04
CDK5RAP3-217ENST00000580287 ORC4O43929 436 aa14.77□□□□□ -0.04
CDK5RAP3-217ENST00000580287 YBX3P16989 372 aaKnown RBP eCLIP14.77□□□□□ -0.04
CDK5RAP3-217ENST00000580287 RASA1P20936 1047 aa14.77□□□□□ -0.04
CDK5RAP3-217ENST00000580287 LIFRP42702 1097 aa14.77□□□□□ -0.04
CDK5RAP3-217ENST00000580287 METAP2P50579 478 aaKnown RBP eCLIP14.77□□□□□ -0.04
CDK5RAP3-217ENST00000580287 CLEC10AQ8IUN9 316 aa14.77□□□□□ -0.04
CDK5RAP3-217ENST00000580287 CDAN1Q8IWY9 1227 aa14.77□□□□□ -0.04
CDK5RAP3-217ENST00000580287 MRIQ9BWK5 157 aa14.77□□□□□ -0.04
CDK5RAP3-217ENST00000580287 SPDYE2BA6NHP3 402 aa14.77□□□□□ -0.05
CDK5RAP3-217ENST00000580287 SPDYE6P0CI01 402 aa14.77□□□□□ -0.05
CDK5RAP3-217ENST00000580287 HDLBPQ00341 1268 aaKnown RBP14.77□□□□□ -0.05
CDK5RAP3-217ENST00000580287 SART3Q15020 963 aaKnown RBP14.77□□□□□ -0.05
CDK5RAP3-217ENST00000580287 DLGAP5Q15398 846 aa14.77□□□□□ -0.05
CDK5RAP3-217ENST00000580287 SGMS1Q86VZ5 419 aa14.77□□□□□ -0.05
CDK5RAP3-217ENST00000580287 IQCA1Q86XH1 822 aa14.77□□□□□ -0.05
CDK5RAP3-217ENST00000580287 CERS3Q8IU89 383 aa14.77□□□□□ -0.05
CDK5RAP3-217ENST00000580287 ZNF444Q8N0Y2 327 aaPredicted RBP14.77□□□□□ -0.05
CDK5RAP3-217ENST00000580287 VPS33BQ9H267 617 aa14.77□□□□□ -0.05
CDK5RAP3-217ENST00000580287 FDPSP14324 419 aaKnown RBP14.76□□□□□ -0.05
CDK5RAP3-217ENST00000580287 GUCY1B3Q02153 619 aa14.76□□□□□ -0.05
CDK5RAP3-217ENST00000580287 IFIT1BQ5T764 474 aaKnown RBP14.76□□□□□ -0.05
CDK5RAP3-217ENST00000580287 OTUD7BQ6GQQ9 843 aa14.76□□□□□ -0.05
CDK5RAP3-217ENST00000580287 C16orf86Q6ZW13 317 aa14.76□□□□□ -0.05
CDK5RAP3-217ENST00000580287 FAM184AQ8NB25 1140 aa14.76□□□□□ -0.05
CDK5RAP3-217ENST00000580287 VEZTQ9HBM0 779 aa14.76□□□□□ -0.05
CDK5RAP3-217ENST00000580287 ZNF541Q9H0D2 1346 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms