RNA–Protein interactions for RNA: ENST00000580054.1

SMARCD2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5

Gene SMARCD2, Length 477 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-208ENST00000580054 ATP11BQ9Y2G3 1177 aa11.55□□□□□ -0.56
SMARCD2-208ENST00000580054 NDUFB9Q9Y6M9 179 aa11.55□□□□□ -0.56
SMARCD2-208ENST00000580054 FOCADQ5VW36 1801 aa11.55□□□□□ -0.56
SMARCD2-208ENST00000580054 TNFRSF10AO00220 468 aa11.54□□□□□ -0.56
SMARCD2-208ENST00000580054 MAPK4P31152 587 aa11.54□□□□□ -0.56
SMARCD2-208ENST00000580054 HOXA7P31268 230 aaPredicted RBP11.54□□□□□ -0.56
SMARCD2-208ENST00000580054 CCDC102BQ68D86 513 aa11.54□□□□□ -0.56
SMARCD2-208ENST00000580054 PLEKHH3Q7Z736 793 aa11.54□□□□□ -0.56
SMARCD2-208ENST00000580054 SYMPKQ92797 1274 aaKnown RBP11.54□□□□□ -0.56
SMARCD2-208ENST00000580054 FAM163AQ96GL9 167 aaPredicted RBP11.54□□□□□ -0.56
SMARCD2-208ENST00000580054 TBC1D2Q9BYX2 928 aa11.54□□□□□ -0.56
SMARCD2-208ENST00000580054 PRDM5Q9NQX1 630 aaPredicted RBP11.54□□□□□ -0.56
SMARCD2-208ENST00000580054 PRKAG2Q9UGJ0 569 aa11.54□□□□□ -0.56
SMARCD2-208ENST00000580054 DDX20Q9UHI6 824 aaKnown RBP11.54□□□□□ -0.56
SMARCD2-208ENST00000580054 GPR75-ASB3A0A0A6YYF3 556 aa11.53□□□□□ -0.56
SMARCD2-208ENST00000580054 BACE1P56817 501 aa11.53□□□□□ -0.56
SMARCD2-208ENST00000580054 SMAD3P84022 425 aaKnown RBP11.53□□□□□ -0.56
SMARCD2-208ENST00000580054 MECOMQ03112 1051 aa11.53□□□□□ -0.56
SMARCD2-208ENST00000580054 TJAP1Q5JTD0 557 aa11.53□□□□□ -0.56
SMARCD2-208ENST00000580054 ZGPATQ8N5A5 531 aaKnown RBP11.53□□□□□ -0.56
SMARCD2-208ENST00000580054 BADQ92934 168 aa11.53□□□□□ -0.56
SMARCD2-208ENST00000580054 AS3MTQ9HBK9 375 aa11.53□□□□□ -0.56
SMARCD2-208ENST00000580054 TMOD4Q9NZQ9 345 aa11.53□□□□□ -0.56
SMARCD2-208ENST00000580054 DNM1LO00429 736 aa11.52□□□□□ -0.57
SMARCD2-208ENST00000580054 NPM3O75607 178 aaKnown RBP11.52□□□□□ -0.57
SMARCD2-208ENST00000580054 CNGA1P29973 690 aa11.52□□□□□ -0.57
SMARCD2-208ENST00000580054 MAP2K5Q13163 448 aa11.52□□□□□ -0.57
SMARCD2-208ENST00000580054 TRIM60Q495X7 471 aa11.52□□□□□ -0.57
SMARCD2-208ENST00000580054 GJC2Q5T442 439 aaPredicted RBP11.52□□□□□ -0.57
SMARCD2-208ENST00000580054 SH3RF1Q7Z6J0 888 aa11.52□□□□□ -0.57
SMARCD2-208ENST00000580054 CCAR1Q8IX12 1150 aaKnown RBP11.52□□□□□ -0.57
SMARCD2-208ENST00000580054 SLF2Q8IX21 1173 aa11.52□□□□□ -0.57
SMARCD2-208ENST00000580054 FAM9BQ8IZU0 186 aa11.52□□□□□ -0.57
SMARCD2-208ENST00000580054 TRPV1Q8NER1 839 aa11.52□□□□□ -0.57
SMARCD2-208ENST00000580054 LPAR1Q92633 364 aa11.52□□□□□ -0.57
SMARCD2-208ENST00000580054 WDR18Q9BV38 432 aa11.52□□□□□ -0.57
SMARCD2-208ENST00000580054 DNAJC18Q9H819 358 aa11.52□□□□□ -0.57
SMARCD2-208ENST00000580054 PDLIM7Q9NR12 457 aa11.52□□□□□ -0.57
SMARCD2-208ENST00000580054 CEP126Q9P2H0 1117 aa11.52□□□□□ -0.57
SMARCD2-208ENST00000580054 PA2G4Q9UQ80 394 aaKnown RBP11.52□□□□□ -0.57
SMARCD2-208ENST00000580054 MYO5AQ9Y4I1 1855 aaKnown RBP11.52□□□□□ -0.57
SMARCD2-208ENST00000580054 CNMDO75829 334 aa11.51□□□□□ -0.57
SMARCD2-208ENST00000580054 CIAO1O76071 339 aa11.51□□□□□ -0.57
SMARCD2-208ENST00000580054 GDF11O95390 407 aa11.51□□□□□ -0.57
SMARCD2-208ENST00000580054 CYP2C19P33261 490 aa11.51□□□□□ -0.57
SMARCD2-208ENST00000580054 GRIN2CQ14957 1233 aa11.51□□□□□ -0.57
SMARCD2-208ENST00000580054 MFSD14CQ5VZR4 134 aa11.51□□□□□ -0.57
SMARCD2-208ENST00000580054 ANO1Q5XXA6 986 aa11.51□□□□□ -0.57
SMARCD2-208ENST00000580054 PI16Q6UXB8 463 aa11.51□□□□□ -0.57
SMARCD2-208ENST00000580054 MRPL50Q8N5N7 158 aaKnown RBP11.51□□□□□ -0.57
SMARCD2-208ENST00000580054 PDS5AQ29RF7 1337 aaKnown RBP11.51□□□□□ -0.57
SMARCD2-208ENST00000580054 SMCHD1A6NHR9 2005 aa11.5□□□□□ -0.57
SMARCD2-208ENST00000580054 TMEM265A0A087WTH1 108 aa11.5□□□□□ -0.57
SMARCD2-208ENST00000580054 TRIM43BA6NCK2 446 aa11.5□□□□□ -0.57
SMARCD2-208ENST00000580054 ITGB8P26012 769 aa11.5□□□□□ -0.57
SMARCD2-208ENST00000580054 PLA2G5P39877 138 aa11.5□□□□□ -0.57
SMARCD2-208ENST00000580054 EPHB4P54760 987 aa11.5□□□□□ -0.57
SMARCD2-208ENST00000580054 WDR78Q5VTH9 848 aa11.5□□□□□ -0.57
SMARCD2-208ENST00000580054 SLC39A5Q6ZMH5 540 aa11.5□□□□□ -0.57
SMARCD2-208ENST00000580054 ERICH6Q7L0X2 663 aa11.5□□□□□ -0.57
SMARCD2-208ENST00000580054 NPLOC4Q8TAT6 608 aa11.5□□□□□ -0.57
SMARCD2-208ENST00000580054 TRIM43Q96BQ3 446 aaPredicted RBP11.5□□□□□ -0.57
SMARCD2-208ENST00000580054 EDC3Q96F86 508 aaKnown RBP11.5□□□□□ -0.57
SMARCD2-208ENST00000580054 CWC22Q9HCG8 908 aaKnown RBP11.5□□□□□ -0.57
SMARCD2-208ENST00000580054 HERC5Q9UII4 1024 aaKnown RBP11.5□□□□□ -0.57
SMARCD2-208ENST00000580054 ZNF236Q9UL36 1845 aa11.5□□□□□ -0.57
SMARCD2-208ENST00000580054 PLXNA1Q9UIW2 1896 aa11.5□□□□□ -0.57
SMARCD2-208ENST00000580054 TCF20Q9UGU0 1960 aaKnown RBP11.5□□□□□ -0.57
SMARCD2-208ENST00000580054 ZBTB22O15209 634 aa11.49□□□□□ -0.57
SMARCD2-208ENST00000580054 ASNSP08243 561 aa11.49□□□□□ -0.57
SMARCD2-208ENST00000580054 CYBAP13498 195 aa11.49□□□□□ -0.57
SMARCD2-208ENST00000580054 TIMM10P62072 90 aa11.49□□□□□ -0.57
SMARCD2-208ENST00000580054 SPTY2D1Q68D10 685 aaPredicted RBP11.49□□□□□ -0.57
SMARCD2-208ENST00000580054 TBC1D9Q6ZT07 1266 aa11.49□□□□□ -0.57
SMARCD2-208ENST00000580054 TEX11Q8IYF3 940 aa11.49□□□□□ -0.57
SMARCD2-208ENST00000580054 SH3RF3Q8TEJ3 882 aaPredicted RBP11.49□□□□□ -0.57
SMARCD2-208ENST00000580054 NSUN4Q96CB9 384 aaKnown RBP11.49□□□□□ -0.57
SMARCD2-208ENST00000580054 RNPC3Q96LT9 517 aaKnown RBP11.49□□□□□ -0.57
SMARCD2-208ENST00000580054 EMILIN3Q9NT22 766 aa11.49□□□□□ -0.57
SMARCD2-208ENST00000580054 ZBTB21Q9ULJ3 1066 aa11.49□□□□□ -0.57
SMARCD2-208ENST00000580054 PTPRCP08575 1304 aa11.49□□□□□ -0.57
SMARCD2-208ENST00000580054 BDP1A6H8Y1 2624 aa11.49□□□□□ -0.57
SMARCD2-208ENST00000580054 MYH1P12882 1939 aa11.48□□□□□ -0.57
SMARCD2-208ENST00000580054 C19orf81C9J6K1 198 aa11.48□□□□□ -0.57
SMARCD2-208ENST00000580054 USP17L10C9JJH3 530 aa11.48□□□□□ -0.57
SMARCD2-208ENST00000580054 MSCO60682 206 aa11.48□□□□□ -0.57
SMARCD2-208ENST00000580054 MYCNP04198 464 aaPredicted RBP11.48□□□□□ -0.57
SMARCD2-208ENST00000580054 PTPREP23469 700 aa11.48□□□□□ -0.57
SMARCD2-208ENST00000580054 IL15P40933 162 aaPredicted RBP11.48□□□□□ -0.57
SMARCD2-208ENST00000580054 SNX17Q15036 470 aa11.48□□□□□ -0.57
SMARCD2-208ENST00000580054 ZYXQ15942 572 aaKnown RBP11.48□□□□□ -0.57
SMARCD2-208ENST00000580054 FBXO3Q9UK99 471 aa11.48□□□□□ -0.57
SMARCD2-208ENST00000580054 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.48□□□□□ -0.57
SMARCD2-208ENST00000580054 GBF1Q92538 1859 aa11.47□□□□□ -0.57
SMARCD2-208ENST00000580054 A0A0G2JMZ2 1700 aa11.47□□□□□ -0.57
SMARCD2-208ENST00000580054 ZNF521Q96K83 1311 aa11.47□□□□□ -0.57
SMARCD2-208ENST00000580054 A0A1B0GUL7 405 aa11.47□□□□□ -0.57
SMARCD2-208ENST00000580054 SLC15A5A6NIM6 579 aa11.47□□□□□ -0.57
SMARCD2-208ENST00000580054 KBTBD13C9JR72 458 aa11.47□□□□□ -0.57
SMARCD2-208ENST00000580054 IGHA2P01877 340 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms