RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, human

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KPNB1-208	ENST00000580019	INTS4	Q96HW7	963 aa	Known RBP	4.99	□□□□□ -1.61
KPNB1-208	ENST00000580019	ST14	Q9Y5Y6	855 aa		4.99	□□□□□ -1.61
KPNB1-208	ENST00000580019	PRR33	A8MZF0	331 aa		4.98	□□□□□ -1.61
KPNB1-208	ENST00000580019	CILP	O75339	1184 aa		4.98	□□□□□ -1.61
KPNB1-208	ENST00000580019	GSTP1	P09211	210 aa	Known RBP	4.98	□□□□□ -1.61
KPNB1-208	ENST00000580019	HMGB1	P09429	215 aa	Known RBP	4.98	□□□□□ -1.61
KPNB1-208	ENST00000580019	ITPKA	P23677	461 aa		4.98	□□□□□ -1.61
KPNB1-208	ENST00000580019	PDE6B	P35913	854 aa		4.98	□□□□□ -1.61
KPNB1-208	ENST00000580019	MAGEA10	P43363	369 aa	Predicted RBP	4.98	□□□□□ -1.61
KPNB1-208	ENST00000580019	EHHADH	Q08426	723 aa		4.98	□□□□□ -1.61
KPNB1-208	ENST00000580019	VMAC	Q2NL98	169 aa		4.98	□□□□□ -1.61
KPNB1-208	ENST00000580019	NOM1	Q5C9Z4	860 aa	Known RBP	4.98	□□□□□ -1.61
KPNB1-208	ENST00000580019	CRB2	Q5IJ48	1285 aa		4.98	□□□□□ -1.61
KPNB1-208	ENST00000580019	ZFYVE28	Q9HCC9	887 aa		4.98	□□□□□ -1.61
KPNB1-208	ENST00000580019	ZNF777	Q9ULD5	760 aa	Predicted RBP	4.98	□□□□□ -1.61
KPNB1-208	ENST00000580019	YBX2	Q9Y2T7	364 aa	Known RBP	4.98	□□□□□ -1.61
KPNB1-208	ENST00000580019	POLR3D	P05423	398 aa	Predicted RBP	4.97	□□□□□ -1.61
KPNB1-208	ENST00000580019	RFX1	P22670	979 aa		4.97	□□□□□ -1.61
KPNB1-208	ENST00000580019	GDF5	P43026	501 aa		4.97	□□□□□ -1.61
KPNB1-208	ENST00000580019	PDE4C	Q08493	712 aa		4.97	□□□□□ -1.61
KPNB1-208	ENST00000580019	PDZD8	Q8NEN9	1154 aa		4.97	□□□□□ -1.61
KPNB1-208	ENST00000580019	SCAND2P	Q9GZW5	306 aa	Predicted RBP	4.97	□□□□□ -1.61
KPNB1-208	ENST00000580019	ADAMTS10	Q9H324	1103 aa		4.97	□□□□□ -1.61
KPNB1-208	ENST00000580019	C19orf44	Q9H6X5	657 aa		4.97	□□□□□ -1.61
KPNB1-208	ENST00000580019	SP110	Q9HB58	689 aa		4.97	□□□□□ -1.61
KPNB1-208	ENST00000580019	CAPN6	Q9Y6Q1	641 aa		4.97	□□□□□ -1.61
KPNB1-208	ENST00000580019	PRICKLE3	O43900	615 aa	Predicted RBP	4.96	□□□□□ -1.62
KPNB1-208	ENST00000580019	ADAM17	P78536	824 aa		4.96	□□□□□ -1.62
KPNB1-208	ENST00000580019	ZC3H12A	Q5D1E8	599 aa	Known RBP	4.96	□□□□□ -1.62
KPNB1-208	ENST00000580019	SFRP5	Q5T4F7	317 aa		4.96	□□□□□ -1.62
KPNB1-208	ENST00000580019	TMPRSS7	Q7RTY8	843 aa		4.96	□□□□□ -1.62
KPNB1-208	ENST00000580019	PROSER2	Q86WR7	435 aa	Predicted RBP	4.96	□□□□□ -1.62
KPNB1-208	ENST00000580019	ZSWIM5	Q9P217	1185 aa		4.96	□□□□□ -1.62
KPNB1-208	ENST00000580019	MTMR7	Q9Y216	660 aa		4.96	□□□□□ -1.62
KPNB1-208	ENST00000580019	MFAP1	P55081	439 aa	Known RBP	4.95	□□□□□ -1.62
KPNB1-208	ENST00000580019	FGD1	P98174	961 aa		4.95	□□□□□ -1.62
KPNB1-208	ENST00000580019	PTPN12	Q05209	780 aa	Known RBP	4.95	□□□□□ -1.62
KPNB1-208	ENST00000580019	ZFYVE27	Q5T4F4	411 aa		4.95	□□□□□ -1.62
KPNB1-208	ENST00000580019	GALNT12	Q8IXK2	581 aa		4.95	□□□□□ -1.62
KPNB1-208	ENST00000580019	OXR1	Q8N573	874 aa		4.95	□□□□□ -1.62
KPNB1-208	ENST00000580019	GZF1	Q9H116	711 aa	Predicted RBP	4.95	□□□□□ -1.62
KPNB1-208	ENST00000580019	PATL2	C9JE40	543 aa	Known RBP	4.94	□□□□□ -1.62
KPNB1-208	ENST00000580019	ESR1	P03372	595 aa		4.94	□□□□□ -1.62
KPNB1-208	ENST00000580019	RBM25	P49756	843 aa	Known RBP	4.94	□□□□□ -1.62
KPNB1-208	ENST00000580019	FAM69C	Q0P6D2	419 aa		4.94	□□□□□ -1.62
KPNB1-208	ENST00000580019	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	4.94	□□□□□ -1.62
KPNB1-208	ENST00000580019	KCNB2	Q92953	911 aa		4.94	□□□□□ -1.62
KPNB1-208	ENST00000580019	MBD1	Q9UIS9	605 aa	Predicted RBP	4.94	□□□□□ -1.62
KPNB1-208	ENST00000580019	TPX2	Q9ULW0	747 aa	Known RBP	4.94	□□□□□ -1.62
KPNB1-208	ENST00000580019	POLI	Q9UNA4	740 aa		4.94	□□□□□ -1.62
KPNB1-208	ENST00000580019	FITM1	A5D6W6	292 aa		4.93	□□□□□ -1.62
KPNB1-208	ENST00000580019	C1QTNF3-AMACR	E9PGA6	284 aa		4.93	□□□□□ -1.62
KPNB1-208	ENST00000580019		E9PSI1	815 aa		4.93	□□□□□ -1.62
KPNB1-208	ENST00000580019	SLPI	P03973	132 aa		4.93	□□□□□ -1.62
KPNB1-208	ENST00000580019	NR0B2	Q15466	257 aa		4.93	□□□□□ -1.62
KPNB1-208	ENST00000580019	LINC01356	Q8N9X3	169 aa		4.93	□□□□□ -1.62
KPNB1-208	ENST00000580019	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	4.93	□□□□□ -1.62
KPNB1-208	ENST00000580019	CYR61	O00622	381 aa		4.92	□□□□□ -1.62
KPNB1-208	ENST00000580019	IGSF3	O75054	1194 aa		4.92	□□□□□ -1.62
KPNB1-208	ENST00000580019	C6	P13671	934 aa		4.92	□□□□□ -1.62
KPNB1-208	ENST00000580019	USP5	P45974	858 aa		4.92	□□□□□ -1.62
KPNB1-208	ENST00000580019	EIF1AX	P47813	144 aa	Known RBP	4.92	□□□□□ -1.62
KPNB1-208	ENST00000580019	SRSF3	P84103	164 aa	Known RBP	4.92	□□□□□ -1.62
KPNB1-208	ENST00000580019	TIGD5	Q53EQ6	642 aa		4.92	□□□□□ -1.62
KPNB1-208	ENST00000580019	UBXN11	Q5T124	520 aa		4.92	□□□□□ -1.62
KPNB1-208	ENST00000580019	KIAA0319	Q5VV43	1072 aa		4.92	□□□□□ -1.62
KPNB1-208	ENST00000580019	CNKSR3	Q6P9H4	555 aa		4.92	□□□□□ -1.62
KPNB1-208	ENST00000580019	ARMCX6	Q7L4S7	300 aa		4.92	□□□□□ -1.62
KPNB1-208	ENST00000580019	CALR3	Q96L12	384 aa	Known RBP	4.92	□□□□□ -1.62
KPNB1-208	ENST00000580019	N4BP3	O15049	544 aa		4.91	□□□□□ -1.62
KPNB1-208	ENST00000580019	SLITRK5	O94991	958 aa		4.91	□□□□□ -1.62
KPNB1-208	ENST00000580019	ZNF157	P51786	506 aa	Predicted RBP	4.91	□□□□□ -1.62
KPNB1-208	ENST00000580019	SNX17	Q15036	470 aa		4.91	□□□□□ -1.62
KPNB1-208	ENST00000580019	ALKBH2	Q6NS38	261 aa		4.91	□□□□□ -1.62
KPNB1-208	ENST00000580019	CDC37L1	Q7L3B6	337 aa		4.91	□□□□□ -1.62
KPNB1-208	ENST00000580019	UBE3D	Q7Z6J8	389 aa		4.91	□□□□□ -1.62
KPNB1-208	ENST00000580019	FNBP4	Q8N3X1	1017 aa	Predicted RBP	4.91	□□□□□ -1.62
KPNB1-208	ENST00000580019	RETREG2	Q8NC44	543 aa		4.91	□□□□□ -1.62
KPNB1-208	ENST00000580019	HELQ	Q8TDG4	1101 aa		4.91	□□□□□ -1.62
KPNB1-208	ENST00000580019	PPP1R13L	Q8WUF5	828 aa		4.91	□□□□□ -1.62
KPNB1-208	ENST00000580019	PICK1	Q9NRD5	415 aa		4.91	□□□□□ -1.62
KPNB1-208	ENST00000580019	SIRT5	Q9NXA8	310 aa		4.91	□□□□□ -1.62
KPNB1-208	ENST00000580019	SEPT3	Q9UH03	358 aa		4.91	□□□□□ -1.62
KPNB1-208	ENST00000580019	OR14I1	A6ND48	311 aa		4.9	□□□□□ -1.63
KPNB1-208	ENST00000580019	HRK	O00198	91 aa		4.9	□□□□□ -1.63
KPNB1-208	ENST00000580019	PPP1R15A	O75807	674 aa	Predicted RBP	4.9	□□□□□ -1.63
KPNB1-208	ENST00000580019	LRIG2	O94898	1065 aa		4.9	□□□□□ -1.63
KPNB1-208	ENST00000580019	TACR2	P21452	398 aa		4.9	□□□□□ -1.63
KPNB1-208	ENST00000580019	NTF4	P34130	210 aa		4.9	□□□□□ -1.63
KPNB1-208	ENST00000580019	EPHB3	P54753	998 aa		4.9	□□□□□ -1.63
KPNB1-208	ENST00000580019	CDCA8	Q53HL2	280 aa		4.9	□□□□□ -1.63
KPNB1-208	ENST00000580019	PPM1J	Q5JR12	505 aa		4.9	□□□□□ -1.63
KPNB1-208	ENST00000580019	PDZD3	Q86UT5	571 aa		4.9	□□□□□ -1.63
KPNB1-208	ENST00000580019	CREG2	Q8IUH2	290 aa		4.9	□□□□□ -1.63
KPNB1-208	ENST00000580019	KCT2	Q8NC54	265 aa		4.9	□□□□□ -1.63
KPNB1-208	ENST00000580019	EHD4	Q9H223	541 aa		4.9	□□□□□ -1.63
KPNB1-208	ENST00000580019	SMPD4	Q9NXE4	827 aa		4.9	□□□□□ -1.63
KPNB1-208	ENST00000580019	IRS4	O14654	1257 aa	Predicted RBP	4.89	□□□□□ -1.63
KPNB1-208	ENST00000580019	CBX7	O95931	251 aa		4.89	□□□□□ -1.63
KPNB1-208	ENST00000580019	ZGLP1	P0C6A0	271 aa		4.89	□□□□□ -1.63

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