RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 PABPN1LA6NDY0 278 aaKnown RBP7.91□□□□□ -1.14
COPS3-216ENST00000579716 H3BRJ5 948 aa7.91□□□□□ -1.14
COPS3-216ENST00000579716 F13BP05160 661 aa7.91□□□□□ -1.14
COPS3-216ENST00000579716 GRIK1P39086 918 aa7.91□□□□□ -1.14
COPS3-216ENST00000579716 CASP2P42575 452 aa7.91□□□□□ -1.14
COPS3-216ENST00000579716 NLRP12P59046 1061 aa7.91□□□□□ -1.14
COPS3-216ENST00000579716 PIP4K2BP78356 416 aa7.91□□□□□ -1.14
COPS3-216ENST00000579716 MSMPQ1L6U9 139 aa7.91□□□□□ -1.14
COPS3-216ENST00000579716 TMEM164Q5U3C3 297 aa7.91□□□□□ -1.14
COPS3-216ENST00000579716 LARP1BQ659C4 914 aaKnown RBP7.91□□□□□ -1.14
COPS3-216ENST00000579716 ANKRD34AQ69YU3 496 aa7.91□□□□□ -1.14
COPS3-216ENST00000579716 NCAPG2Q86XI2 1143 aa7.91□□□□□ -1.14
COPS3-216ENST00000579716 ANKRD13BQ86YJ7 626 aa7.91□□□□□ -1.14
COPS3-216ENST00000579716 CCDC47Q96A33 483 aaKnown RBP7.91□□□□□ -1.14
COPS3-216ENST00000579716 NUDT16Q96DE0 195 aaKnown RBP7.91□□□□□ -1.14
COPS3-216ENST00000579716 MRFAP1L1Q96HT8 127 aa7.91□□□□□ -1.14
COPS3-216ENST00000579716 MFSD14AQ96MC6 490 aa7.91□□□□□ -1.14
COPS3-216ENST00000579716 GMLQ99445 158 aa7.91□□□□□ -1.14
COPS3-216ENST00000579716 TGIF2Q9GZN2 237 aa7.91□□□□□ -1.14
COPS3-216ENST00000579716 CHRDQ9H2X0 955 aa7.91□□□□□ -1.14
COPS3-216ENST00000579716 OSGEPQ9NPF4 335 aa7.91□□□□□ -1.14
COPS3-216ENST00000579716 SEPT3Q9UH03 358 aa7.91□□□□□ -1.14
COPS3-216ENST00000579716 TTF2Q9UNY4 1162 aaKnown RBP7.91□□□□□ -1.14
COPS3-216ENST00000579716 LZTS1Q9Y250 596 aa7.91□□□□□ -1.14
COPS3-216ENST00000579716 FNDC3AQ9Y2H6 1198 aaKnown RBP7.91□□□□□ -1.14
COPS3-216ENST00000579716 CCDC163A0A0D9SF12 145 aa7.9□□□□□ -1.14
COPS3-216ENST00000579716 SOX1O00570 391 aaPredicted RBP7.9□□□□□ -1.14
COPS3-216ENST00000579716 FAM163BP0C2L3 166 aa7.9□□□□□ -1.14
COPS3-216ENST00000579716 TRAPPC10P48553 1259 aa7.9□□□□□ -1.14
COPS3-216ENST00000579716 FZD5Q13467 585 aa7.9□□□□□ -1.14
COPS3-216ENST00000579716 SGO2Q562F6 1265 aa7.9□□□□□ -1.14
COPS3-216ENST00000579716 HSP90B2PQ58FF3 399 aa7.9□□□□□ -1.14
COPS3-216ENST00000579716 PDE12Q6L8Q7 609 aaKnown RBP7.9□□□□□ -1.14
COPS3-216ENST00000579716 PHLDB3Q6NSJ2 640 aa7.9□□□□□ -1.14
COPS3-216ENST00000579716 XKR5Q6UX68 686 aa7.9□□□□□ -1.14
COPS3-216ENST00000579716 LMNTD2Q8IXW0 634 aa7.9□□□□□ -1.14
COPS3-216ENST00000579716 TEX19Q8NA77 164 aa7.9□□□□□ -1.14
COPS3-216ENST00000579716 WNT8BQ93098 351 aa7.9□□□□□ -1.14
COPS3-216ENST00000579716 KCNF1Q9H3M0 494 aa7.9□□□□□ -1.14
COPS3-216ENST00000579716 CXorf56Q9H5V9 222 aa7.9□□□□□ -1.14
COPS3-216ENST00000579716 FAM13BQ9NYF5 915 aa7.9□□□□□ -1.14
COPS3-216ENST00000579716 A6NHS1 94 aa7.89□□□□□ -1.15
COPS3-216ENST00000579716 ENPP3O14638 875 aa7.89□□□□□ -1.15
COPS3-216ENST00000579716 KRT18P05783 430 aaKnown RBP7.89□□□□□ -1.15
COPS3-216ENST00000579716 XRCC5P13010 732 aaKnown RBP7.89□□□□□ -1.15
COPS3-216ENST00000579716 CASQ1P31415 396 aa7.89□□□□□ -1.15
COPS3-216ENST00000579716 GNALP38405 381 aa7.89□□□□□ -1.15
COPS3-216ENST00000579716 FAM160A1Q05DH4 1040 aa7.89□□□□□ -1.15
COPS3-216ENST00000579716 KIAA2012Q0VF49 1180 aa7.89□□□□□ -1.15
COPS3-216ENST00000579716 PPP2R5AQ15172 486 aa7.89□□□□□ -1.15
COPS3-216ENST00000579716 CBLL1Q75N03 491 aa7.89□□□□□ -1.15
COPS3-216ENST00000579716 VN1R5Q7Z5H4 357 aa7.89□□□□□ -1.15
COPS3-216ENST00000579716 LCA5Q86VQ0 697 aa7.89□□□□□ -1.15
COPS3-216ENST00000579716 ARPC5LQ9BPX5 153 aa7.89□□□□□ -1.15
COPS3-216ENST00000579716 TMPRSS13Q9BYE2 586 aa7.89□□□□□ -1.15
COPS3-216ENST00000579716 SEZ6LQ9BYH1 1024 aa7.89□□□□□ -1.15
COPS3-216ENST00000579716 RNF208Q9H0X6 261 aa7.89□□□□□ -1.15
COPS3-216ENST00000579716 ACAD8Q9UKU7 415 aa7.89□□□□□ -1.15
COPS3-216ENST00000579716 SMC3Q9UQE7 1217 aa7.89□□□□□ -1.15
COPS3-216ENST00000579716 TBX3O15119 743 aa7.88□□□□□ -1.15
COPS3-216ENST00000579716 MTA2O94776 668 aa7.88□□□□□ -1.15
COPS3-216ENST00000579716 TIAF1O95411 115 aa7.88□□□□□ -1.15
COPS3-216ENST00000579716 MAP4P27816 1152 aaKnown RBP7.88□□□□□ -1.15
COPS3-216ENST00000579716 DNAJA1P31689 397 aaKnown RBP7.88□□□□□ -1.15
COPS3-216ENST00000579716 ALDH1L2Q3SY69 923 aa7.88□□□□□ -1.15
COPS3-216ENST00000579716 PPP4R4Q6NUP7 873 aa7.88□□□□□ -1.15
COPS3-216ENST00000579716 FAM117BQ6P1L5 589 aa7.88□□□□□ -1.15
COPS3-216ENST00000579716 FERMT3Q86UX7 667 aa7.88□□□□□ -1.15
COPS3-216ENST00000579716 CHCHD4Q8N4Q1 142 aa7.88□□□□□ -1.15
COPS3-216ENST00000579716 NGDNQ8NEJ9 315 aaKnown RBP7.88□□□□□ -1.15
COPS3-216ENST00000579716 GOLGA1Q92805 767 aa7.88□□□□□ -1.15
COPS3-216ENST00000579716 FAM210AQ96ND0 272 aa7.88□□□□□ -1.15
COPS3-216ENST00000579716 RUSC1Q9BVN2 902 aa7.88□□□□□ -1.15
COPS3-216ENST00000579716 PIM2Q9P1W9 311 aa7.88□□□□□ -1.15
COPS3-216ENST00000579716 POLG2Q9UHN1 485 aa7.88□□□□□ -1.15
COPS3-216ENST00000579716 TMEM238LA0A1B0GVL6 79 aa7.87□□□□□ -1.15
COPS3-216ENST00000579716 AMPD3Q01432 767 aa7.87□□□□□ -1.15
COPS3-216ENST00000579716 SATB1Q01826 763 aa7.87□□□□□ -1.15
COPS3-216ENST00000579716 KLHL10Q6JEL2 608 aa7.87□□□□□ -1.15
COPS3-216ENST00000579716 CCDC73Q6ZRK6 1079 aa7.87□□□□□ -1.15
COPS3-216ENST00000579716 UBE2Q1Q7Z7E8 422 aa7.87□□□□□ -1.15
COPS3-216ENST00000579716 CLP1Q92989 425 aaKnown RBP7.87□□□□□ -1.15
COPS3-216ENST00000579716 NXPE3Q969Y0 559 aa7.87□□□□□ -1.15
COPS3-216ENST00000579716 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.87□□□□□ -1.15
COPS3-216ENST00000579716 SLKQ9H2G2 1235 aaPredicted RBP7.87□□□□□ -1.15
COPS3-216ENST00000579716 TMEM51Q9NW97 253 aa7.87□□□□□ -1.15
COPS3-216ENST00000579716 ASAP1Q9ULH1 1129 aa7.87□□□□□ -1.15
COPS3-216ENST00000579716 HIF3AQ9Y2N7 669 aa7.87□□□□□ -1.15
COPS3-216ENST00000579716 EID1Q9Y6B2 187 aa7.87□□□□□ -1.15
COPS3-216ENST00000579716 DYTNA2CJ06 578 aa7.86□□□□□ -1.15
COPS3-216ENST00000579716 PDE2AO00408 941 aaPredicted RBP7.86□□□□□ -1.15
COPS3-216ENST00000579716 SART1O43290 800 aaKnown RBP7.86□□□□□ -1.15
COPS3-216ENST00000579716 ADMP35318 185 aa7.86□□□□□ -1.15
COPS3-216ENST00000579716 HMGN5P82970 282 aaKnown RBP7.86□□□□□ -1.15
COPS3-216ENST00000579716 MRPL58Q14197 206 aaKnown RBP7.86□□□□□ -1.15
COPS3-216ENST00000579716 DCTN1Q14203 1278 aa7.86□□□□□ -1.15
COPS3-216ENST00000579716 SYCP2LQ5T4T6 812 aa7.86□□□□□ -1.15
COPS3-216ENST00000579716 WDR75Q8IWA0 830 aaKnown RBP7.86□□□□□ -1.15
COPS3-216ENST00000579716 SLC7A3Q8WY07 619 aa7.86□□□□□ -1.15
COPS3-216ENST00000579716 SLC39A13Q96H72 371 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms