RNA–Protein interactions for RNA: ENST00000579316.5

CSNK1D-211, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-211ENST00000579316 GPR75-ASB3A0A0A6YYF3 556 aa17.27■□□□□ 0.36
CSNK1D-211ENST00000579316 MTMR2Q13614 643 aa17.27■□□□□ 0.36
CSNK1D-211ENST00000579316 ATP2B3Q16720 1220 aa17.27■□□□□ 0.36
CSNK1D-211ENST00000579316 FAM122AQ96E09 287 aa17.27■□□□□ 0.36
CSNK1D-211ENST00000579316 MAP4K4O95819 1239 aaPredicted RBP17.26■□□□□ 0.35
CSNK1D-211ENST00000579316 PHKA1P46020 1223 aa17.26■□□□□ 0.35
CSNK1D-211ENST00000579316 MAP2K5Q13163 448 aa17.26■□□□□ 0.35
CSNK1D-211ENST00000579316 SNX17Q15036 470 aa17.26■□□□□ 0.35
CSNK1D-211ENST00000579316 Q3C1V9 767 aa17.26■□□□□ 0.35
CSNK1D-211ENST00000579316 POTEEQ6S8J3 1075 aa17.26■□□□□ 0.35
CSNK1D-211ENST00000579316 WDR63Q8IWG1 891 aa17.26■□□□□ 0.35
CSNK1D-211ENST00000579316 HOXD11P31277 338 aaPredicted RBP17.25■□□□□ 0.35
CSNK1D-211ENST00000579316 MFSD14CQ5VZR4 134 aa17.25■□□□□ 0.35
CSNK1D-211ENST00000579316 BADQ92934 168 aa17.25■□□□□ 0.35
CSNK1D-211ENST00000579316 TMOD4Q9NZQ9 345 aa17.25■□□□□ 0.35
CSNK1D-211ENST00000579316 HERC5Q9UII4 1024 aaKnown RBP17.25■□□□□ 0.35
CSNK1D-211ENST00000579316 FBXO3Q9UK99 471 aa17.25■□□□□ 0.35
CSNK1D-211ENST00000579316 ATP11BQ9Y2G3 1177 aa17.25■□□□□ 0.35
CSNK1D-211ENST00000579316 PIEZO1Q92508 2521 aa17.25■□□□□ 0.35
CSNK1D-211ENST00000579316 C19orf81C9J6K1 198 aa17.24■□□□□ 0.35
CSNK1D-211ENST00000579316 IGHA2P01877 340 aa17.24■□□□□ 0.35
CSNK1D-211ENST00000579316 HOXC6P09630 235 aa17.24■□□□□ 0.35
CSNK1D-211ENST00000579316 CCAR1Q8IX12 1150 aaKnown RBP17.24■□□□□ 0.35
CSNK1D-211ENST00000579316 EDC3Q96F86 508 aaKnown RBP17.24■□□□□ 0.35
CSNK1D-211ENST00000579316 FLRT1Q9NZU1 646 aa17.24■□□□□ 0.35
CSNK1D-211ENST00000579316 CIAO1O76071 339 aa17.23■□□□□ 0.35
CSNK1D-211ENST00000579316 RASGRF1Q13972 1273 aa17.23■□□□□ 0.35
CSNK1D-211ENST00000579316 SPTY2D1Q68D10 685 aaPredicted RBP17.23■□□□□ 0.35
CSNK1D-211ENST00000579316 SLC39A5Q6ZMH5 540 aa17.23■□□□□ 0.35
CSNK1D-211ENST00000579316 ZNF384Q8TF68 577 aa17.23■□□□□ 0.35
CSNK1D-211ENST00000579316 PDLIM7Q9NR12 457 aa17.23■□□□□ 0.35
CSNK1D-211ENST00000579316 GLRX3O76003 335 aaKnown RBP17.22■□□□□ 0.35
CSNK1D-211ENST00000579316 ASNSP08243 561 aa17.22■□□□□ 0.35
CSNK1D-211ENST00000579316 GRIN2CQ14957 1233 aa17.22■□□□□ 0.35
CSNK1D-211ENST00000579316 C1orf53Q5VUE5 145 aa17.22■□□□□ 0.35
CSNK1D-211ENST00000579316 CCDC102BQ68D86 513 aa17.22■□□□□ 0.35
CSNK1D-211ENST00000579316 ATXN2LQ8WWM7 1075 aaKnown RBP17.22■□□□□ 0.35
CSNK1D-211ENST00000579316 USP44Q9H0E7 712 aa17.22■□□□□ 0.35
CSNK1D-211ENST00000579316 PRDM5Q9NQX1 630 aaPredicted RBP17.22■□□□□ 0.35
CSNK1D-211ENST00000579316 CEP126Q9P2H0 1117 aa17.22■□□□□ 0.35
CSNK1D-211ENST00000579316 ABCF2Q9UG63 623 aa17.22■□□□□ 0.35
CSNK1D-211ENST00000579316 SIPA1L1O43166 1804 aa17.21■□□□□ 0.35
CSNK1D-211ENST00000579316 TRIM43BA6NCK2 446 aa17.21■□□□□ 0.35
CSNK1D-211ENST00000579316 SLC15A5A6NIM6 579 aa17.21■□□□□ 0.35
CSNK1D-211ENST00000579316 MECOMQ03112 1051 aa17.21■□□□□ 0.35
CSNK1D-211ENST00000579316 TRIM60Q495X7 471 aa17.21■□□□□ 0.35
CSNK1D-211ENST00000579316 ARRDC4Q8NCT1 418 aa17.21■□□□□ 0.35
CSNK1D-211ENST00000579316 TRPV1Q8NER1 839 aa17.21■□□□□ 0.35
CSNK1D-211ENST00000579316 TRIM43Q96BQ3 446 aaPredicted RBP17.21■□□□□ 0.35
CSNK1D-211ENST00000579316 GINM1Q9NU53 330 aa17.21■□□□□ 0.35
CSNK1D-211ENST00000579316 USP17L10C9JJH3 530 aa17.2■□□□□ 0.34
CSNK1D-211ENST00000579316 CYBAP13498 195 aa17.2■□□□□ 0.34
CSNK1D-211ENST00000579316 MAP3K12Q12852 859 aa17.2■□□□□ 0.34
CSNK1D-211ENST00000579316 RNPC3Q96LT9 517 aaKnown RBP17.2■□□□□ 0.34
CSNK1D-211ENST00000579316 PAGR1Q9BTK6 254 aa17.2■□□□□ 0.34
CSNK1D-211ENST00000579316 RABGAP1Q9Y3P9 1069 aa17.2■□□□□ 0.34
CSNK1D-211ENST00000579316 KBTBD13C9JR72 458 aa17.19■□□□□ 0.34
CSNK1D-211ENST00000579316 CNMDO75829 334 aa17.19■□□□□ 0.34
CSNK1D-211ENST00000579316 PTPREP23469 700 aa17.19■□□□□ 0.34
CSNK1D-211ENST00000579316 CNGA1P29973 690 aa17.19■□□□□ 0.34
CSNK1D-211ENST00000579316 ADORA1P30542 326 aa17.19■□□□□ 0.34
CSNK1D-211ENST00000579316 CCNA1P78396 465 aa17.19■□□□□ 0.34
CSNK1D-211ENST00000579316 JAG1P78504 1218 aa17.19■□□□□ 0.34
CSNK1D-211ENST00000579316 GRB14Q14449 540 aa17.19■□□□□ 0.34
CSNK1D-211ENST00000579316 GJC2Q5T442 439 aaPredicted RBP17.19■□□□□ 0.34
CSNK1D-211ENST00000579316 SH3RF1Q7Z6J0 888 aa17.19■□□□□ 0.34
CSNK1D-211ENST00000579316 ASB2Q96Q27 587 aa17.19■□□□□ 0.34
CSNK1D-211ENST00000579316 PI4KBQ9UBF8 816 aa17.19■□□□□ 0.34
CSNK1D-211ENST00000579316 DNAJB2P25686 324 aa17.18■□□□□ 0.34
CSNK1D-211ENST00000579316 IL15P40933 162 aaPredicted RBP17.18■□□□□ 0.34
CSNK1D-211ENST00000579316 EPHB4P54760 987 aa17.18■□□□□ 0.34
CSNK1D-211ENST00000579316 ATP2B2Q01814 1243 aa17.18■□□□□ 0.34
CSNK1D-211ENST00000579316 AKNAD1Q5T1N1 836 aa17.18■□□□□ 0.34
CSNK1D-211ENST00000579316 ERICH6Q7L0X2 663 aa17.18■□□□□ 0.34
CSNK1D-211ENST00000579316 METTL16Q86W50 562 aaKnown RBP17.18■□□□□ 0.34
CSNK1D-211ENST00000579316 ADAMTS19Q8TE59 1207 aa17.18■□□□□ 0.34
CSNK1D-211ENST00000579316 CWC22Q9HCG8 908 aaKnown RBP17.18■□□□□ 0.34
CSNK1D-211ENST00000579316 EMILIN3Q9NT22 766 aa17.18■□□□□ 0.34
CSNK1D-211ENST00000579316 ARIH1Q9Y4X5 557 aaPredicted RBP17.18■□□□□ 0.34
CSNK1D-211ENST00000579316 SYNGAP1Q96PV0 1343 aa17.18■□□□□ 0.34
CSNK1D-211ENST00000579316 CHD9Q3L8U1 2897 aa17.17■□□□□ 0.34
CSNK1D-211ENST00000579316 CYP2C19P33261 490 aa17.17■□□□□ 0.34
CSNK1D-211ENST00000579316 GSTO1P78417 241 aa17.17■□□□□ 0.34
CSNK1D-211ENST00000579316 NSUN4Q96CB9 384 aaKnown RBP17.17■□□□□ 0.34
CSNK1D-211ENST00000579316 C12orf42Q96LP6 360 aa17.17■□□□□ 0.34
CSNK1D-211ENST00000579316 SIL1Q9H173 461 aa17.17■□□□□ 0.34
CSNK1D-211ENST00000579316 DHX36Q9H2U1 1008 aaKnown RBP17.17■□□□□ 0.34
CSNK1D-211ENST00000579316 DNAJC18Q9H819 358 aa17.17■□□□□ 0.34
CSNK1D-211ENST00000579316 THEGQ9P2T0 379 aa17.17■□□□□ 0.34
CSNK1D-211ENST00000579316 ZNF236Q9UL36 1845 aa17.17■□□□□ 0.34
CSNK1D-211ENST00000579316 LDHCP07864 332 aa17.16■□□□□ 0.34
CSNK1D-211ENST00000579316 ITGB8P26012 769 aa17.16■□□□□ 0.34
CSNK1D-211ENST00000579316 LBX2Q6XYB7 198 aa17.16■□□□□ 0.34
CSNK1D-211ENST00000579316 NPLOC4Q8TAT6 608 aa17.16■□□□□ 0.34
CSNK1D-211ENST00000579316 ZNF576Q9H609 170 aa17.16■□□□□ 0.34
CSNK1D-211ENST00000579316 ZBTB21Q9ULJ3 1066 aa17.16■□□□□ 0.34
CSNK1D-211ENST00000579316 PTPRCP08575 1304 aa17.16■□□□□ 0.34
CSNK1D-211ENST00000579316 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.15■□□□□ 0.34
CSNK1D-211ENST00000579316 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.15■□□□□ 0.34
CSNK1D-211ENST00000579316 KIAA0355O15063 1070 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms