RNA–Protein interactions for RNA: ENST00000578910.1

CCDC57-212, Transcript of coiled-coil domain containing 57, humanhuman

TSL 5

Gene CCDC57, Length 796 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-212ENST00000578910 TMEM106CQ9BVX2 250 aa17.63■□□□□ 0.41
CCDC57-212ENST00000578910 CRNKL1Q9BZJ0 848 aaKnown RBP17.63■□□□□ 0.41
CCDC57-212ENST00000578910 ARMT1Q9H993 441 aa17.63■□□□□ 0.41
CCDC57-212ENST00000578910 GINM1Q9NU53 330 aa17.63■□□□□ 0.41
CCDC57-212ENST00000578910 ZBTB21Q9ULJ3 1066 aa17.63■□□□□ 0.41
CCDC57-212ENST00000578910 FOCADQ5VW36 1801 aa17.63■□□□□ 0.41
CCDC57-212ENST00000578910 HTTP42858 3142 aa17.63■□□□□ 0.41
CCDC57-212ENST00000578910 PTPRFP10586 1907 aa17.62■□□□□ 0.41
CCDC57-212ENST00000578910 C19orf81C9J6K1 198 aa17.62■□□□□ 0.41
CCDC57-212ENST00000578910 USP17L10C9JJH3 530 aa17.62■□□□□ 0.41
CCDC57-212ENST00000578910 MYCP01106 439 aaPredicted RBP17.62■□□□□ 0.41
CCDC57-212ENST00000578910 POLR3DP05423 398 aaPredicted RBP17.62■□□□□ 0.41
CCDC57-212ENST00000578910 EN2P19622 333 aaPredicted RBP17.62■□□□□ 0.41
CCDC57-212ENST00000578910 ADD2P35612 726 aa17.62■□□□□ 0.41
CCDC57-212ENST00000578910 FCGRTP55899 365 aa17.62■□□□□ 0.41
CCDC57-212ENST00000578910 EVX2Q03828 476 aa17.62■□□□□ 0.41
CCDC57-212ENST00000578910 MTMR2Q13614 643 aa17.62■□□□□ 0.41
CCDC57-212ENST00000578910 ANKRD13CQ8N6S4 541 aa17.62■□□□□ 0.41
CCDC57-212ENST00000578910 SDR42E1Q8WUS8 393 aa17.62■□□□□ 0.41
CCDC57-212ENST00000578910 ASCC2Q9H1I8 757 aaPredicted RBP17.62■□□□□ 0.41
CCDC57-212ENST00000578910 EHD4Q9H223 541 aa17.62■□□□□ 0.41
CCDC57-212ENST00000578910 GABRQQ9UN88 632 aa17.62■□□□□ 0.41
CCDC57-212ENST00000578910 MYH1P12882 1939 aa17.62■□□□□ 0.41
CCDC57-212ENST00000578910 TNRC18O15417 2968 aaPredicted RBP17.61■□□□□ 0.41
CCDC57-212ENST00000578910 ATAD5Q96QE3 1844 aa17.61■□□□□ 0.41
CCDC57-212ENST00000578910 PRKAB2O43741 272 aa17.61■□□□□ 0.41
CCDC57-212ENST00000578910 GH2P01242 217 aa17.61■□□□□ 0.41
CCDC57-212ENST00000578910 RRP1P56182 461 aaKnown RBP17.61■□□□□ 0.41
CCDC57-212ENST00000578910 PABPC4Q13310 644 aaKnown RBP eCLIP17.61■□□□□ 0.41
CCDC57-212ENST00000578910 CERKLQ49MI3 558 aaPredicted RBP17.61■□□□□ 0.41
CCDC57-212ENST00000578910 DCP1AQ9NPI6 582 aaPredicted RBP17.61■□□□□ 0.41
CCDC57-212ENST00000578910 ECHDC1Q9NTX5 307 aa17.61■□□□□ 0.41
CCDC57-212ENST00000578910 MCM9Q9NXL9 1143 aa17.61■□□□□ 0.41
CCDC57-212ENST00000578910 TMOD4Q9NZQ9 345 aa17.61■□□□□ 0.41
CCDC57-212ENST00000578910 PNMA3Q9UL41 463 aa17.61■□□□□ 0.41
CCDC57-212ENST00000578910 HOXA7P31268 230 aaPredicted RBP17.6■□□□□ 0.41
CCDC57-212ENST00000578910 PRKCZQ05513 592 aa17.6■□□□□ 0.41
CCDC57-212ENST00000578910 RAET1EQ8TD07 263 aa17.6■□□□□ 0.41
CCDC57-212ENST00000578910 P2RX7Q99572 595 aaKnown RBP17.6■□□□□ 0.41
CCDC57-212ENST00000578910 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.6■□□□□ 0.413e-7■■□□□ 12.9
CCDC57-212ENST00000578910 MYPNQ86TC9 1320 aa17.6■□□□□ 0.41
CCDC57-212ENST00000578910 CENPFP49454 3210 aa17.6■□□□□ 0.41
CCDC57-212ENST00000578910 GRK4P32298 578 aa17.59■□□□□ 0.41
CCDC57-212ENST00000578910 SHMT1P34896 483 aa17.59■□□□□ 0.41
CCDC57-212ENST00000578910 GABPAQ06546 454 aa17.59■□□□□ 0.41
CCDC57-212ENST00000578910 UBE3CQ15386 1083 aa17.59■□□□□ 0.41
CCDC57-212ENST00000578910 ABCB5Q2M3G0 1257 aa17.59■□□□□ 0.41
CCDC57-212ENST00000578910 EMILIN3Q9NT22 766 aa17.59■□□□□ 0.41
CCDC57-212ENST00000578910 MBD4O95243 580 aa17.58■□□□□ 0.4
CCDC57-212ENST00000578910 CYP2D6P10635 497 aa17.58■□□□□ 0.4
CCDC57-212ENST00000578910 GCLCP48506 637 aaPredicted RBP17.58■□□□□ 0.4
CCDC57-212ENST00000578910 RAB3GAP1Q15042 981 aa17.58■□□□□ 0.4
CCDC57-212ENST00000578910 MTFR1Q15390 333 aa17.58■□□□□ 0.4
CCDC57-212ENST00000578910 FAM110CQ1W6H9 321 aa17.58■□□□□ 0.4
CCDC57-212ENST00000578910 CRBNQ96SW2 442 aa17.58■□□□□ 0.4
CCDC57-212ENST00000578910 CABP5Q9NP86 173 aa17.58■□□□□ 0.4
CCDC57-212ENST00000578910 TNPO2O14787 897 aaKnown RBP17.57■□□□□ 0.4
CCDC57-212ENST00000578910 GUCY1A2P33402 732 aa17.57■□□□□ 0.4
CCDC57-212ENST00000578910 FLT3LGP49771 235 aa17.57■□□□□ 0.4
CCDC57-212ENST00000578910 TSHZ3Q63HK5 1081 aa17.57■□□□□ 0.4
CCDC57-212ENST00000578910 ZSCAN25Q6NSZ9 544 aa17.57■□□□□ 0.4
CCDC57-212ENST00000578910 USP17L2Q6R6M4 530 aa17.57■□□□□ 0.4
CCDC57-212ENST00000578910 DYNLL2Q96FJ2 89 aa17.57■□□□□ 0.4
CCDC57-212ENST00000578910 PUS7LQ9H0K6 701 aaKnown RBP17.57■□□□□ 0.4
CCDC57-212ENST00000578910 ATP8A2Q9NTI2 1148 aa17.57■□□□□ 0.4
CCDC57-212ENST00000578910 KIAA0100Q14667 2235 aaKnown RBP17.57■□□□□ 0.4
CCDC57-212ENST00000578910 PEX10O60683 326 aa17.56■□□□□ 0.4
CCDC57-212ENST00000578910 IRX3P78415 501 aaPredicted RBP17.56■□□□□ 0.4
CCDC57-212ENST00000578910 ZYXQ15942 572 aaKnown RBP17.56■□□□□ 0.4
CCDC57-212ENST00000578910 ACER1Q8TDN7 264 aa17.56■□□□□ 0.4
CCDC57-212ENST00000578910 COA7Q96BR5 231 aa17.56■□□□□ 0.4
CCDC57-212ENST00000578910 BIN2Q9UBW5 565 aaPredicted RBP17.56■□□□□ 0.4
CCDC57-212ENST00000578910 CYP2D7A0A087X1C5 515 aa17.55■□□□□ 0.4
CCDC57-212ENST00000578910 USP17L12C9JPN9 530 aa17.55■□□□□ 0.4
CCDC57-212ENST00000578910 USP17L21D6R901 530 aa17.55■□□□□ 0.4
CCDC57-212ENST00000578910 SMIM22K7EJ46 135 aa17.55■□□□□ 0.4
CCDC57-212ENST00000578910 ADCY3O60266 1144 aa17.55■□□□□ 0.4
CCDC57-212ENST00000578910 SEPT2Q15019 361 aa17.55■□□□□ 0.4
CCDC57-212ENST00000578910 Q3C1V9 767 aa17.55■□□□□ 0.4
CCDC57-212ENST00000578910 RBPJLQ9UBG7 517 aa17.55■□□□□ 0.4
CCDC57-212ENST00000578910 MORF4L1Q9UBU8 362 aa17.55■□□□□ 0.4
CCDC57-212ENST00000578910 SLC4A4Q9Y6R1 1079 aa17.55■□□□□ 0.4
CCDC57-212ENST00000578910 MGAMO43451 1857 aa17.54■□□□□ 0.4
CCDC57-212ENST00000578910 LOC285556D6RIA3 1793 aa17.54■□□□□ 0.4
CCDC57-212ENST00000578910 HERVK_113P62684 666 aa17.54■□□□□ 0.4
CCDC57-212ENST00000578910 C12orf60Q5U649 245 aa17.54■□□□□ 0.4
CCDC57-212ENST00000578910 POTEEQ6S8J3 1075 aa17.54■□□□□ 0.4
CCDC57-212ENST00000578910 KBTBD3Q8NAB2 608 aa17.54■□□□□ 0.4
CCDC57-212ENST00000578910 SLC44A5Q8NCS7 719 aa17.54■□□□□ 0.4
CCDC57-212ENST00000578910 GPATCH3Q96I76 525 aa17.54■□□□□ 0.4
CCDC57-212ENST00000578910 TXNRD2Q9NNW7 524 aa17.54■□□□□ 0.4
CCDC57-212ENST00000578910 DOCK3Q8IZD9 2030 aa17.54■□□□□ 0.4
CCDC57-212ENST00000578910 MPHOSPH10O00566 681 aaKnown RBP17.53■□□□□ 0.4
CCDC57-212ENST00000578910 ELNP15502 786 aa17.53■□□□□ 0.4
CCDC57-212ENST00000578910 USP14P54578 494 aa17.53■□□□□ 0.4
CCDC57-212ENST00000578910 IRF5Q13568 498 aa17.53■□□□□ 0.4
CCDC57-212ENST00000578910 OTUD7AQ8TE49 926 aaPredicted RBP17.53■□□□□ 0.4
CCDC57-212ENST00000578910 C12orf42Q96LP6 360 aa17.53■□□□□ 0.4
CCDC57-212ENST00000578910 STRBPQ96SI9 672 aaKnown RBP17.53■□□□□ 0.4
CCDC57-212ENST00000578910 FEZ1Q99689 392 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms