RNA–Protein interactions for RNA: ENST00000578600.1

PTPRM-208, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-208ENST00000578600 CILPO75339 1184 aa7.87□□□□□ -1.15
PTPRM-208ENST00000578600 ARHGEF15O94989 841 aa7.87□□□□□ -1.15
PTPRM-208ENST00000578600 ECEL1O95672 775 aa7.87□□□□□ -1.15
PTPRM-208ENST00000578600 CYP11A1P05108 521 aa7.87□□□□□ -1.15
PTPRM-208ENST00000578600 CTSBP07858 339 aa7.87□□□□□ -1.15
PTPRM-208ENST00000578600 NASPP49321 788 aaPredicted RBP7.87□□□□□ -1.15
PTPRM-208ENST00000578600 SUZ12Q15022 739 aaKnown RBP7.87□□□□□ -1.15
PTPRM-208ENST00000578600 POU4F3Q15319 338 aa7.87□□□□□ -1.15
PTPRM-208ENST00000578600 LINC00114Q6XXX2 140 aa7.87□□□□□ -1.15
PTPRM-208ENST00000578600 NOP9Q86U38 636 aaKnown RBP7.87□□□□□ -1.15
PTPRM-208ENST00000578600 SLITRK4Q8IW52 837 aa7.87□□□□□ -1.15
PTPRM-208ENST00000578600 CBX8Q9HC52 389 aa7.87□□□□□ -1.15
PTPRM-208ENST00000578600 GINM1Q9NU53 330 aa7.87□□□□□ -1.15
PTPRM-208ENST00000578600 EFR3BQ9Y2G0 817 aa7.87□□□□□ -1.15
PTPRM-208ENST00000578600 SCAF11Q99590 1463 aaKnown RBP7.87□□□□□ -1.15
PTPRM-208ENST00000578600 CDC42BPBQ9Y5S2 1711 aa7.86□□□□□ -1.15
PTPRM-208ENST00000578600 MSH6P52701 1360 aa7.86□□□□□ -1.15
PTPRM-208ENST00000578600 SOX9P48436 509 aa7.86□□□□□ -1.15
PTPRM-208ENST00000578600 CCDC144BQ3MJ40 725 aa7.86□□□□□ -1.15
PTPRM-208ENST00000578600 CKAP2LQ8IYA6 745 aa7.86□□□□□ -1.15
PTPRM-208ENST00000578600 DTWD1Q8N5C7 304 aa7.86□□□□□ -1.15
PTPRM-208ENST00000578600 FBXO27Q8NI29 283 aa7.86□□□□□ -1.15
PTPRM-208ENST00000578600 CPLX3Q8WVH0 158 aa7.86□□□□□ -1.15
PTPRM-208ENST00000578600 JARID2Q92833 1246 aaPredicted RBP7.86□□□□□ -1.15
PTPRM-208ENST00000578600 KRT82Q9NSB4 513 aa7.86□□□□□ -1.15
PTPRM-208ENST00000578600 FGD6Q6ZV73 1430 aa7.86□□□□□ -1.15
PTPRM-208ENST00000578600 ADGBQ8N7X0 1667 aa7.86□□□□□ -1.15
PTPRM-208ENST00000578600 NEURL4Q96JN8 1562 aa7.85□□□□□ -1.15
PTPRM-208ENST00000578600 ADAM11O75078 769 aa7.85□□□□□ -1.15
PTPRM-208ENST00000578600 SELPP16109 830 aa7.85□□□□□ -1.15
PTPRM-208ENST00000578600 MAOBP27338 520 aa7.85□□□□□ -1.15
PTPRM-208ENST00000578600 APOBRQ0VD83 1088 aa7.85□□□□□ -1.15
PTPRM-208ENST00000578600 COL9A2Q14055 689 aaPredicted RBP7.85□□□□□ -1.15
PTPRM-208ENST00000578600 MPP2Q14168 576 aa7.85□□□□□ -1.15
PTPRM-208ENST00000578600 MAP1SQ66K74 1059 aaPredicted RBP7.85□□□□□ -1.15
PTPRM-208ENST00000578600 NKD1Q969G9 470 aa7.85□□□□□ -1.15
PTPRM-208ENST00000578600 TRIM11Q96F44 468 aa7.85□□□□□ -1.15
PTPRM-208ENST00000578600 CCDC86Q9H6F5 360 aaKnown RBP7.85□□□□□ -1.15
PTPRM-208ENST00000578600 ZSWIM4Q9H7M6 989 aa7.85□□□□□ -1.15
PTPRM-208ENST00000578600 ENAMQ9NRM1 1142 aa7.85□□□□□ -1.15
PTPRM-208ENST00000578600 KCNK4Q9NYG8 393 aa7.85□□□□□ -1.15
PTPRM-208ENST00000578600 STRIP2Q9ULQ0 834 aa7.85□□□□□ -1.15
PTPRM-208ENST00000578600 NCOA3Q9Y6Q9 1424 aa7.85□□□□□ -1.15
PTPRM-208ENST00000578600 INO80Q9ULG1 1556 aaPredicted RBP7.84□□□□□ -1.15
PTPRM-208ENST00000578600 ZNF862O60290 1169 aa7.84□□□□□ -1.15
PTPRM-208ENST00000578600 HMGB1P09429 215 aaKnown RBP7.84□□□□□ -1.15
PTPRM-208ENST00000578600 FOXD4L6Q3SYB3 417 aaPredicted RBP7.84□□□□□ -1.15
PTPRM-208ENST00000578600 FOXD4L3Q6VB84 417 aaPredicted RBP7.84□□□□□ -1.15
PTPRM-208ENST00000578600 FBXO11Q86XK2 927 aa7.84□□□□□ -1.15
PTPRM-208ENST00000578600 NEDD1Q8NHV4 660 aa7.84□□□□□ -1.15
PTPRM-208ENST00000578600 GPBAR1Q8TDU6 330 aa7.84□□□□□ -1.15
PTPRM-208ENST00000578600 KCNB2Q92953 911 aa7.84□□□□□ -1.15
PTPRM-208ENST00000578600 CORO1BQ9BR76 489 aa7.84□□□□□ -1.15
PTPRM-208ENST00000578600 TMEM94Q12767 1356 aa7.84□□□□□ -1.16
PTPRM-208ENST00000578600 POLR1AO95602 1720 aaPredicted RBP7.83□□□□□ -1.16
PTPRM-208ENST00000578600 CDK12Q9NYV4 1490 aaPredicted RBP7.83□□□□□ -1.16
PTPRM-208ENST00000578600 MBD5Q9P267 1494 aa7.83□□□□□ -1.16
PTPRM-208ENST00000578600 A0A0A0MRY4 1105 aa7.83□□□□□ -1.16
PTPRM-208ENST00000578600 LOC100289279A0A1B0GTE1 492 aa7.83□□□□□ -1.16
PTPRM-208ENST00000578600 DDX3YO15523 660 aaKnown RBP7.83□□□□□ -1.16
PTPRM-208ENST00000578600 DLGAP3O95886 979 aa7.83□□□□□ -1.16
PTPRM-208ENST00000578600 LORP23490 312 aaPredicted RBP7.83□□□□□ -1.16
PTPRM-208ENST00000578600 CD68P34810 354 aaPredicted RBP7.83□□□□□ -1.16
PTPRM-208ENST00000578600 SNRPNP63162 240 aaKnown RBP7.83□□□□□ -1.16
PTPRM-208ENST00000578600 TRAPPC3LQ5T215 181 aa7.83□□□□□ -1.16
PTPRM-208ENST00000578600 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.83□□□□□ -1.16
PTPRM-208ENST00000578600 SVOPQ8N4V2 548 aa7.83□□□□□ -1.16
PTPRM-208ENST00000578600 ZC3H12CQ9C0D7 883 aaKnown RBP7.83□□□□□ -1.16
PTPRM-208ENST00000578600 OSBPL2Q9H1P3 480 aa7.83□□□□□ -1.16
PTPRM-208ENST00000578600 RRAGCQ9HB90 399 aa7.83□□□□□ -1.16
PTPRM-208ENST00000578600 TMA7Q9Y2S6 64 aaKnown RBP7.83□□□□□ -1.16
PTPRM-208ENST00000578600 ABCC3O15438 1527 aa7.83□□□□□ -1.16
PTPRM-208ENST00000578600 IQGAP1P46940 1657 aa7.83□□□□□ -1.16
PTPRM-208ENST00000578600 CCDC141Q6ZP82 1450 aa7.82□□□□□ -1.16
PTPRM-208ENST00000578600 DLL1O00548 723 aa7.82□□□□□ -1.16
PTPRM-208ENST00000578600 TLR3O15455 904 aaKnown RBP7.82□□□□□ -1.16
PTPRM-208ENST00000578600 WIPF1O43516 503 aa7.82□□□□□ -1.16
PTPRM-208ENST00000578600 ATF3P18847 181 aa7.82□□□□□ -1.16
PTPRM-208ENST00000578600 NLRP12P59046 1061 aa7.82□□□□□ -1.16
PTPRM-208ENST00000578600 RPL6Q02878 288 aaKnown RBP7.82□□□□□ -1.16
PTPRM-208ENST00000578600 SEZ6Q53EL9 994 aa7.82□□□□□ -1.16
PTPRM-208ENST00000578600 GIMAP6Q6P9H5 292 aa7.82□□□□□ -1.16
PTPRM-208ENST00000578600 REC114Q7Z4M0 266 aa7.82□□□□□ -1.16
PTPRM-208ENST00000578600 FMR1NBQ8N0W7 255 aaPredicted RBP7.82□□□□□ -1.16
PTPRM-208ENST00000578600 WDR89Q96FK6 387 aaPredicted RBP7.82□□□□□ -1.16
PTPRM-208ENST00000578600 SLC52A1Q9NWF4 448 aa7.82□□□□□ -1.16
PTPRM-208ENST00000578600 KANK1Q14678 1352 aa7.82□□□□□ -1.16
PTPRM-208ENST00000578600 TMEM2Q9UHN6 1383 aa7.82□□□□□ -1.16
PTPRM-208ENST00000578600 GFRA2O00451 464 aa7.81□□□□□ -1.16
PTPRM-208ENST00000578600 LTKP29376 864 aa7.81□□□□□ -1.16
PTPRM-208ENST00000578600 CDK8P49336 464 aa7.81□□□□□ -1.16
PTPRM-208ENST00000578600 CWF19L2Q2TBE0 894 aaKnown RBP7.81□□□□□ -1.16
PTPRM-208ENST00000578600 KIF4BQ2VIQ3 1234 aa7.81□□□□□ -1.16
PTPRM-208ENST00000578600 USP26Q9BXU7 913 aa7.81□□□□□ -1.16
PTPRM-208ENST00000578600 R3HCC1Q9Y3T6 440 aaKnown RBP7.81□□□□□ -1.16
PTPRM-208ENST00000578600 MRVI1Q9Y6F6 885 aa7.81□□□□□ -1.16
PTPRM-208ENST00000578600 ARHGAP31Q2M1Z3 1444 aa7.8□□□□□ -1.16
PTPRM-208ENST00000578600 SLIT1O75093 1534 aa7.8□□□□□ -1.16
PTPRM-208ENST00000578600 LIG1P18858 919 aa7.8□□□□□ -1.16
PTPRM-208ENST00000578600 RBM6P78332 1123 aaKnown RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms