RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 CCDC88AQ3V6T2 1871 aa12.88□□□□□ -0.35
SKA2-204ENST00000578519 MYO5AQ9Y4I1 1855 aaKnown RBP12.88□□□□□ -0.35
SKA2-204ENST00000578519 MYH13Q9UKX3 1938 aa12.88□□□□□ -0.35
SKA2-204ENST00000578519 GAKO14976 1311 aa12.88□□□□□ -0.35
SKA2-204ENST00000578519 ROBO3Q96MS0 1386 aa12.87□□□□□ -0.35
SKA2-204ENST00000578519 A0A1W2PQ27 194 aa12.87□□□□□ -0.35
SKA2-204ENST00000578519 A0A1W2PQ64 194 aa12.87□□□□□ -0.35
SKA2-204ENST00000578519 A0A1W2PQD8 194 aa12.87□□□□□ -0.35
SKA2-204ENST00000578519 PITPNM1O00562 1244 aa12.87□□□□□ -0.35
SKA2-204ENST00000578519 TSPY3P0CV98 308 aa12.87□□□□□ -0.35
SKA2-204ENST00000578519 TSPY8P0CW00 308 aa12.87□□□□□ -0.35
SKA2-204ENST00000578519 HDLBPQ00341 1268 aaKnown RBP12.87□□□□□ -0.35
SKA2-204ENST00000578519 KIF23Q02241 960 aaPredicted RBP12.87□□□□□ -0.35
SKA2-204ENST00000578519 MYSM1Q5VVJ2 828 aa12.87□□□□□ -0.35
SKA2-204ENST00000578519 ADALQ6DHV7 355 aa12.87□□□□□ -0.35
SKA2-204ENST00000578519 HHIPL2Q6UWX4 724 aa12.87□□□□□ -0.35
SKA2-204ENST00000578519 RAB11FIP4Q86YS3 637 aa12.87□□□□□ -0.35
SKA2-204ENST00000578519 CCDC144CPQ8IYA2 1237 aa12.87□□□□□ -0.35
SKA2-204ENST00000578519 ENAHQ8N8S7 591 aaPredicted RBP12.87□□□□□ -0.35
SKA2-204ENST00000578519 TNMDQ9H2S6 317 aa12.87□□□□□ -0.35
SKA2-204ENST00000578519 FOXP1Q9H334 677 aaPredicted RBP12.87□□□□□ -0.35
SKA2-204ENST00000578519 JAG2Q9Y219 1238 aa12.87□□□□□ -0.35
SKA2-204ENST00000578519 NRXN2Q9P2S2 1712 aa12.86□□□□□ -0.35
SKA2-204ENST00000578519 SPTLC2O15270 562 aa12.86□□□□□ -0.35
SKA2-204ENST00000578519 KINO60870 393 aaKnown RBP12.86□□□□□ -0.35
SKA2-204ENST00000578519 BMP15O95972 392 aa12.86□□□□□ -0.35
SKA2-204ENST00000578519 TFAP4Q01664 338 aa12.86□□□□□ -0.35
SKA2-204ENST00000578519 EZH2Q15910 746 aaKnown RBP12.86□□□□□ -0.35
SKA2-204ENST00000578519 ANO1Q5XXA6 986 aa12.86□□□□□ -0.35
SKA2-204ENST00000578519 FAM173BQ6P4H8 233 aa12.86□□□□□ -0.35
SKA2-204ENST00000578519 SASS6Q6UVJ0 657 aa12.86□□□□□ -0.35
SKA2-204ENST00000578519 PHKBQ93100 1093 aa12.86□□□□□ -0.35
SKA2-204ENST00000578519 TEKT1Q969V4 418 aa12.86□□□□□ -0.35
SKA2-204ENST00000578519 USP28Q96RU2 1077 aa12.86□□□□□ -0.35
SKA2-204ENST00000578519 FAM217BQ9NTX9 383 aaPredicted RBP12.86□□□□□ -0.35
SKA2-204ENST00000578519 MKRN1Q9UHC7 482 aaKnown RBP12.86□□□□□ -0.35
SKA2-204ENST00000578519 CYP2D7A0A087X1C5 515 aa12.85□□□□□ -0.35
SKA2-204ENST00000578519 PPP6R2O75170 966 aa12.85□□□□□ -0.35
SKA2-204ENST00000578519 PRDM1O75626 825 aa12.85□□□□□ -0.35
SKA2-204ENST00000578519 HLA-DOAP06340 250 aa12.85□□□□□ -0.35
SKA2-204ENST00000578519 USP17L8P0C7I0 530 aa12.85□□□□□ -0.35
SKA2-204ENST00000578519 RXRAP19793 462 aa12.85□□□□□ -0.35
SKA2-204ENST00000578519 U2AF2P26368 475 aaKnown RBP eCLIP12.85□□□□□ -0.35
SKA2-204ENST00000578519 EN1Q05925 392 aaPredicted RBP12.85□□□□□ -0.35
SKA2-204ENST00000578519 DIXDC1Q155Q3 683 aa12.85□□□□□ -0.35
SKA2-204ENST00000578519 ZRSR1Q15695 479 aaKnown RBP12.85□□□□□ -0.35
SKA2-204ENST00000578519 RILPL1Q5EBL4 403 aa12.85□□□□□ -0.35
SKA2-204ENST00000578519 SOGA3Q5TF21 947 aa12.85□□□□□ -0.35
SKA2-204ENST00000578519 STRIP1Q5VSL9 837 aa12.85□□□□□ -0.35
SKA2-204ENST00000578519 MSL1Q68DK7 614 aa12.85□□□□□ -0.35
SKA2-204ENST00000578519 POTEAQ6S8J7 498 aa12.85□□□□□ -0.35
SKA2-204ENST00000578519 CCDC125Q86Z20 511 aa12.85□□□□□ -0.35
SKA2-204ENST00000578519 MAPKAPK5Q8IW41 473 aa12.85□□□□□ -0.35
SKA2-204ENST00000578519 CCAR1Q8IX12 1150 aaKnown RBP12.85□□□□□ -0.35
SKA2-204ENST00000578519 CCDC34Q96HJ3 373 aa12.85□□□□□ -0.35
SKA2-204ENST00000578519 GPR101Q96P66 508 aaPredicted RBP12.85□□□□□ -0.35
SKA2-204ENST00000578519 MYL10Q9BUA6 226 aa12.85□□□□□ -0.35
SKA2-204ENST00000578519 VPS33BQ9H267 617 aa12.85□□□□□ -0.35
SKA2-204ENST00000578519 CLSTN2Q9H4D0 955 aa12.85□□□□□ -0.35
SKA2-204ENST00000578519 SWAP70Q9UH65 585 aa12.85□□□□□ -0.35
SKA2-204ENST00000578519 NOL7Q9UMY1 257 aaKnown RBP12.85□□□□□ -0.35
SKA2-204ENST00000578519 TACC3Q9Y6A5 838 aa12.85□□□□□ -0.35
SKA2-204ENST00000578519 KIAA1551Q9HCM1 1747 aa12.85□□□□□ -0.35
SKA2-204ENST00000578519 DTNBO60941 627 aa12.84□□□□□ -0.35
SKA2-204ENST00000578519 MMP1P03956 469 aa12.84□□□□□ -0.35
SKA2-204ENST00000578519 CALML3P27482 149 aa12.84□□□□□ -0.35
SKA2-204ENST00000578519 CEBPZQ03701 1054 aaKnown RBP12.84□□□□□ -0.35
SKA2-204ENST00000578519 TPRNQ4KMQ1 711 aa12.84□□□□□ -0.35
SKA2-204ENST00000578519 C16orf86Q6ZW13 317 aa12.84□□□□□ -0.35
SKA2-204ENST00000578519 RTKN2Q8IZC4 609 aa12.84□□□□□ -0.35
SKA2-204ENST00000578519 LINC00301Q8NCQ3 95 aa12.84□□□□□ -0.35
SKA2-204ENST00000578519 MRPS27Q92552 414 aaKnown RBP12.84□□□□□ -0.35
SKA2-204ENST00000578519 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.84□□□□□ -0.35
SKA2-204ENST00000578519 RBSNQ9H1K0 784 aa12.84□□□□□ -0.35
SKA2-204ENST00000578519 SENP2Q9HC62 589 aa12.84□□□□□ -0.35
SKA2-204ENST00000578519 DACT1Q9NYF0 836 aa12.84□□□□□ -0.35
SKA2-204ENST00000578519 TTF2Q9UNY4 1162 aaKnown RBP12.84□□□□□ -0.35
SKA2-204ENST00000578519 LRRC37AA6NMS7 1700 aa12.84□□□□□ -0.35
SKA2-204ENST00000578519 FAM160A1Q05DH4 1040 aa12.83□□□□□ -0.36
SKA2-204ENST00000578519 TROAPQ12815 778 aa12.83□□□□□ -0.36
SKA2-204ENST00000578519 SLC39A14Q15043 492 aa12.83□□□□□ -0.36
SKA2-204ENST00000578519 FAM47AQ5JRC9 791 aa12.83□□□□□ -0.36
SKA2-204ENST00000578519 TMTC3Q6ZXV5 915 aa12.83□□□□□ -0.36
SKA2-204ENST00000578519 NBPF11Q86T75 865 aa12.83□□□□□ -0.36
SKA2-204ENST00000578519 NOSTRINQ8IVI9 506 aa12.83□□□□□ -0.36
SKA2-204ENST00000578519 NEDD1Q8NHV4 660 aa12.83□□□□□ -0.36
SKA2-204ENST00000578519 PPP1R9BQ96SB3 815 aa12.83□□□□□ -0.36
SKA2-204ENST00000578519 SH3GLB2Q9NR46 395 aa12.83□□□□□ -0.36
SKA2-204ENST00000578519 USP40Q9NVE5 1235 aa12.83□□□□□ -0.36
SKA2-204ENST00000578519 HOOK1Q9UJC3 728 aaKnown RBP12.83□□□□□ -0.36
SKA2-204ENST00000578519 MYO3BQ8WXR4 1341 aa12.83□□□□□ -0.36
SKA2-204ENST00000578519 CHD4Q14839 1912 aa12.82□□□□□ -0.36
SKA2-204ENST00000578519 USP17L3A6NCW0 530 aa12.82□□□□□ -0.36
SKA2-204ENST00000578519 USP17L4A6NCW7 530 aa12.82□□□□□ -0.36
SKA2-204ENST00000578519 CUTAO60888 179 aa12.82□□□□□ -0.36
SKA2-204ENST00000578519 CYP2D6P10635 497 aa12.82□□□□□ -0.36
SKA2-204ENST00000578519 LIG1P18858 919 aa12.82□□□□□ -0.36
SKA2-204ENST00000578519 SMARCA1P28370 1054 aa12.82□□□□□ -0.36
SKA2-204ENST00000578519 KRT2P35908 639 aa12.82□□□□□ -0.36
SKA2-204ENST00000578519 CDK8P49336 464 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms