RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 ZFPM1Q8IX07 1006 aa15.78■□□□□ 0.12
SRSF1-202ENST00000578430 STK11IPQ8N1F8 1099 aa15.78■□□□□ 0.12
SRSF1-202ENST00000578430 IGDCC4Q8TDY8 1250 aa15.78■□□□□ 0.12
SRSF1-202ENST00000578430 BRF1Q92994 677 aa15.78■□□□□ 0.12
SRSF1-202ENST00000578430 DYNLL2Q96FJ2 89 aa15.78■□□□□ 0.12
SRSF1-202ENST00000578430 ZNF274Q96GC6 653 aaPredicted RBP15.78■□□□□ 0.12
SRSF1-202ENST00000578430 CCDC17Q96LX7 622 aa15.78■□□□□ 0.12
SRSF1-202ENST00000578430 TRIM34Q9BYJ4 488 aa15.78■□□□□ 0.12
SRSF1-202ENST00000578430 TCP11L1Q9NUJ3 509 aa15.78■□□□□ 0.12
SRSF1-202ENST00000578430 HERC5Q9UII4 1024 aaKnown RBP15.78■□□□□ 0.12
SRSF1-202ENST00000578430 CNTNAP1P78357 1384 aa15.77■□□□□ 0.12
SRSF1-202ENST00000578430 PITPNM2Q9BZ72 1349 aa15.77■□□□□ 0.12
SRSF1-202ENST00000578430 DDTLA6NHG4 134 aaPredicted RBP15.77■□□□□ 0.12
SRSF1-202ENST00000578430 SMIM22K7EJ46 135 aa15.77■□□□□ 0.12
SRSF1-202ENST00000578430 PRDM1O75626 825 aa15.77■□□□□ 0.12
SRSF1-202ENST00000578430 HSP90AA1P07900 732 aaKnown RBP15.77■□□□□ 0.12
SRSF1-202ENST00000578430 RASA1P20936 1047 aa15.77■□□□□ 0.12
SRSF1-202ENST00000578430 EPS15P42566 896 aa15.77■□□□□ 0.12
SRSF1-202ENST00000578430 EVX2Q03828 476 aa15.77■□□□□ 0.12
SRSF1-202ENST00000578430 SH3BP5LQ7L8J4 393 aa15.77■□□□□ 0.12
SRSF1-202ENST00000578430 CHST3Q7LGC8 479 aa15.77■□□□□ 0.12
SRSF1-202ENST00000578430 SGMS1Q86VZ5 419 aa15.77■□□□□ 0.12
SRSF1-202ENST00000578430 CRACR2BQ8N4Y2 399 aaPredicted RBP15.77■□□□□ 0.12
SRSF1-202ENST00000578430 INTS4Q96HW7 963 aaKnown RBP15.77■□□□□ 0.12
SRSF1-202ENST00000578430 LRRC2Q9BYS8 371 aa15.77■□□□□ 0.12
SRSF1-202ENST00000578430 IQCA1LA6NCM1 817 aa15.76■□□□□ 0.11
SRSF1-202ENST00000578430 TBC1D12O60347 775 aa15.76■□□□□ 0.11
SRSF1-202ENST00000578430 EGFRP00533 1210 aa15.76■□□□□ 0.11
SRSF1-202ENST00000578430 RCAN1P53805 252 aa15.76■□□□□ 0.11
SRSF1-202ENST00000578430 HTRA3P83110 453 aa15.76■□□□□ 0.11
SRSF1-202ENST00000578430 TFAP4Q01664 338 aa15.76■□□□□ 0.11
SRSF1-202ENST00000578430 WTAPQ15007 396 aa15.76■□□□□ 0.11
SRSF1-202ENST00000578430 SLC4A8Q2Y0W8 1093 aa15.76■□□□□ 0.11
SRSF1-202ENST00000578430 PPP4R3BQ5MIZ7 849 aa15.76■□□□□ 0.11
SRSF1-202ENST00000578430 NEDD1Q8NHV4 660 aa15.76■□□□□ 0.11
SRSF1-202ENST00000578430 HOOK2Q96ED9 719 aa15.76■□□□□ 0.11
SRSF1-202ENST00000578430 CSRNP1Q96S65 589 aa15.76■□□□□ 0.11
SRSF1-202ENST00000578430 ZSCAN10Q96SZ4 725 aaPredicted RBP15.76■□□□□ 0.11
SRSF1-202ENST00000578430 LY9Q9HBG7 655 aa15.76■□□□□ 0.11
SRSF1-202ENST00000578430 HACL1Q9UJ83 578 aa15.76■□□□□ 0.11
SRSF1-202ENST00000578430 TPCN1Q9ULQ1 816 aa15.76■□□□□ 0.11
SRSF1-202ENST00000578430 PPP2R3BQ9Y5P8 575 aa15.76■□□□□ 0.11
SRSF1-202ENST00000578430 PLIN4Q96Q06 1357 aa15.75■□□□□ 0.11
SRSF1-202ENST00000578430 TSPY3P0CV98 308 aa15.75■□□□□ 0.11
SRSF1-202ENST00000578430 TSPY8P0CW00 308 aa15.75■□□□□ 0.11
SRSF1-202ENST00000578430 RASA3Q14644 834 aa15.75■□□□□ 0.11
SRSF1-202ENST00000578430 SEC23AQ15436 765 aa15.75■□□□□ 0.11
SRSF1-202ENST00000578430 TATDN1Q6P1N9 297 aa15.75■□□□□ 0.11
SRSF1-202ENST00000578430 USP50Q70EL3 339 aaPredicted RBP15.75■□□□□ 0.11
SRSF1-202ENST00000578430 NOL8Q76FK4 1167 aaKnown RBP15.75■□□□□ 0.11
SRSF1-202ENST00000578430 DGKHQ86XP1 1220 aa15.75■□□□□ 0.11
SRSF1-202ENST00000578430 SLC44A5Q8NCS7 719 aa15.75■□□□□ 0.11
SRSF1-202ENST00000578430 RBM46Q8TBY0 533 aaKnown RBP15.75■□□□□ 0.11
SRSF1-202ENST00000578430 TRPM4Q8TD43 1214 aa15.75■□□□□ 0.11
SRSF1-202ENST00000578430 ANKS1AQ92625 1134 aa15.75■□□□□ 0.11
SRSF1-202ENST00000578430 TNKSO95271 1327 aa15.74■□□□□ 0.11
SRSF1-202ENST00000578430 CCDC69A6NI79 296 aa15.74■□□□□ 0.11
SRSF1-202ENST00000578430 PFKFB2O60825 505 aa15.74■□□□□ 0.11
SRSF1-202ENST00000578430 SHMT1P34896 483 aa15.74■□□□□ 0.11
SRSF1-202ENST00000578430 SLC4A3P48751 1232 aa15.74■□□□□ 0.11
SRSF1-202ENST00000578430 MAP3K10Q02779 954 aa15.74■□□□□ 0.11
SRSF1-202ENST00000578430 APOBRQ0VD83 1088 aa15.74■□□□□ 0.11
SRSF1-202ENST00000578430 ME3Q16798 604 aa15.74■□□□□ 0.11
SRSF1-202ENST00000578430 FAM47AQ5JRC9 791 aa15.74■□□□□ 0.11
SRSF1-202ENST00000578430 SYNE3Q6ZMZ3 975 aa15.74■□□□□ 0.11
SRSF1-202ENST00000578430 NFXL1Q6ZNB6 911 aa15.74■□□□□ 0.11
SRSF1-202ENST00000578430 NKX2-3Q8TAU0 364 aa15.74■□□□□ 0.11
SRSF1-202ENST00000578430 ZC3H15Q8WU90 426 aaKnown RBP15.74■□□□□ 0.11
SRSF1-202ENST00000578430 SLKQ9H2G2 1235 aaPredicted RBP15.74■□□□□ 0.11
SRSF1-202ENST00000578430 CWC22Q9HCG8 908 aaKnown RBP15.74■□□□□ 0.11
SRSF1-202ENST00000578430 PGAP2Q9UHJ9 254 aa15.74■□□□□ 0.11
SRSF1-202ENST00000578430 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.74■□□□□ 0.11
SRSF1-202ENST00000578430 SIPA1L1O43166 1804 aa15.73■□□□□ 0.11
SRSF1-202ENST00000578430 SCN4AP35499 1836 aa15.73■□□□□ 0.11
SRSF1-202ENST00000578430 KLF18A0A0U1RQI7 1052 aa15.73■□□□□ 0.11
SRSF1-202ENST00000578430 DHX16O60231 1041 aaKnown RBP15.73■□□□□ 0.11
SRSF1-202ENST00000578430 PDIA3P30101 505 aaKnown RBP15.73■□□□□ 0.11
SRSF1-202ENST00000578430 PPP2R5BQ15173 497 aa15.73■□□□□ 0.11
SRSF1-202ENST00000578430 IFIT1BQ5T764 474 aaKnown RBP15.73■□□□□ 0.11
SRSF1-202ENST00000578430 ENAHQ8N8S7 591 aaPredicted RBP15.73■□□□□ 0.11
SRSF1-202ENST00000578430 TMEM39BQ9GZU3 492 aa15.73■□□□□ 0.11
SRSF1-202ENST00000578430 DEFB129Q9H1M3 183 aa15.73■□□□□ 0.11
SRSF1-202ENST00000578430 CALM1P0DP23 149 aa15.72■□□□□ 0.11
SRSF1-202ENST00000578430 CALM2P0DP24 149 aa15.72■□□□□ 0.11
SRSF1-202ENST00000578430 CALM3P0DP25 149 aa15.72■□□□□ 0.11
SRSF1-202ENST00000578430 NOVP48745 357 aa15.72■□□□□ 0.11
SRSF1-202ENST00000578430 HIRAP54198 1017 aaPredicted RBP15.72■□□□□ 0.11
SRSF1-202ENST00000578430 CERKLQ49MI3 558 aaPredicted RBP15.72■□□□□ 0.11
SRSF1-202ENST00000578430 ANGEL2Q5VTE6 544 aaKnown RBP15.72■□□□□ 0.11
SRSF1-202ENST00000578430 APOA5Q6Q788 366 aa15.72■□□□□ 0.11
SRSF1-202ENST00000578430 GTF3C6Q969F1 213 aa15.72■□□□□ 0.11
SRSF1-202ENST00000578430 ZKSCAN3Q9BRR0 538 aa15.72■□□□□ 0.11
SRSF1-202ENST00000578430 LARP6Q9BRS8 491 aaKnown RBP15.72■□□□□ 0.11
SRSF1-202ENST00000578430 LLPHQ9BRT6 129 aaKnown RBP15.72■□□□□ 0.11
SRSF1-202ENST00000578430 DNAJC18Q9H819 358 aa15.72■□□□□ 0.11
SRSF1-202ENST00000578430 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.72■□□□□ 0.11
SRSF1-202ENST00000578430 RRAGCQ9HB90 399 aa15.72■□□□□ 0.11
SRSF1-202ENST00000578430 GPHNQ9NQX3 736 aaPredicted RBP15.72■□□□□ 0.11
SRSF1-202ENST00000578430 GGA3Q9NZ52 723 aa15.72■□□□□ 0.11
SRSF1-202ENST00000578430 SLC12A7Q9Y666 1083 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms