RNA–Protein interactions for RNA: ENST00000578240.1

CTC1-203, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-203ENST00000578240 GJB2P29033 226 aa15.41■□□□□ 0.06
CTC1-203ENST00000578240 TCP10Q12799 353 aa15.41■□□□□ 0.06
CTC1-203ENST00000578240 AMOTL1Q8IY63 956 aa15.41■□□□□ 0.06
CTC1-203ENST00000578240 NSUN7Q8NE18 718 aaKnown RBP15.41■□□□□ 0.06
CTC1-203ENST00000578240 ZSCAN10Q96SZ4 725 aaPredicted RBP15.41■□□□□ 0.06
CTC1-203ENST00000578240 MYOZ2Q9NPC6 264 aa15.41■□□□□ 0.06
CTC1-203ENST00000578240 ZNF70Q9UC06 446 aaPredicted RBP15.41■□□□□ 0.06
CTC1-203ENST00000578240 HDAC9Q9UKV0 1011 aa15.41■□□□□ 0.06
CTC1-203ENST00000578240 SCN4AP35499 1836 aa15.4■□□□□ 0.06
CTC1-203ENST00000578240 WNT10BO00744 389 aa15.4■□□□□ 0.06
CTC1-203ENST00000578240 SHMT1P34896 483 aa15.4■□□□□ 0.06
CTC1-203ENST00000578240 WTAPQ15007 396 aa15.4■□□□□ 0.06
CTC1-203ENST00000578240 DLGAP5Q15398 846 aa15.4■□□□□ 0.06
CTC1-203ENST00000578240 NBPF9Q3BBW0 867 aa15.4■□□□□ 0.06
CTC1-203ENST00000578240 OGFOD1Q8N543 542 aa15.4■□□□□ 0.06
CTC1-203ENST00000578240 EHD4Q9H223 541 aa15.4■□□□□ 0.06
CTC1-203ENST00000578240 FAM217BQ9NTX9 383 aaPredicted RBP15.4■□□□□ 0.06
CTC1-203ENST00000578240 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.4■□□□□ 0.06
CTC1-203ENST00000578240 ZC3H4Q9UPT8 1303 aaKnown RBP15.4■□□□□ 0.06
CTC1-203ENST00000578240 PHIPQ8WWQ0 1821 aa15.4■□□□□ 0.06
CTC1-203ENST00000578240 ENTPD3O75355 529 aa15.39■□□□□ 0.05
CTC1-203ENST00000578240 CDC27P30260 824 aa15.39■□□□□ 0.05
CTC1-203ENST00000578240 EIF6P56537 245 aaKnown RBP15.39■□□□□ 0.05
CTC1-203ENST00000578240 MICU3Q86XE3 530 aa15.39■□□□□ 0.05
CTC1-203ENST00000578240 CDAN1Q8IWY9 1227 aa15.39■□□□□ 0.05
CTC1-203ENST00000578240 MICALL2Q8IY33 904 aa15.39■□□□□ 0.05
CTC1-203ENST00000578240 DPF2Q92785 391 aa15.39■□□□□ 0.05
CTC1-203ENST00000578240 UBAC1Q9BSL1 405 aa15.39■□□□□ 0.05
CTC1-203ENST00000578240 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.39■□□□□ 0.05
CTC1-203ENST00000578240 SERPINB13Q9UIV8 391 aa15.39■□□□□ 0.05
CTC1-203ENST00000578240 TSPY2A6NKD2 308 aa15.38■□□□□ 0.05
CTC1-203ENST00000578240 FAM196BA6NMK8 535 aa15.38■□□□□ 0.05
CTC1-203ENST00000578240 TFAP4Q01664 338 aa15.38■□□□□ 0.05
CTC1-203ENST00000578240 TTC6Q86TZ1 520 aa15.38■□□□□ 0.05
CTC1-203ENST00000578240 ZNF654Q8IZM8 581 aa15.38■□□□□ 0.05
CTC1-203ENST00000578240 PGAP2Q9UHJ9 254 aa15.38■□□□□ 0.05
CTC1-203ENST00000578240 SMC3Q9UQE7 1217 aa15.38■□□□□ 0.05
CTC1-203ENST00000578240 GJA3Q9Y6H8 435 aa15.38■□□□□ 0.05
CTC1-203ENST00000578240 ASTN2O75129 1339 aaPredicted RBP15.38■□□□□ 0.05
CTC1-203ENST00000578240 PTPDC1A2A3K4 754 aa15.38■□□□□ 0.05
CTC1-203ENST00000578240 KIF3CO14782 793 aa15.38■□□□□ 0.05
CTC1-203ENST00000578240 BRD1O95696 1058 aa15.38■□□□□ 0.05
CTC1-203ENST00000578240 SART3Q15020 963 aaKnown RBP15.38■□□□□ 0.05
CTC1-203ENST00000578240 NTRK3Q16288 839 aa15.38■□□□□ 0.05
CTC1-203ENST00000578240 METTL16Q86W50 562 aaKnown RBP15.38■□□□□ 0.05
CTC1-203ENST00000578240 IQCA1Q86XH1 822 aa15.38■□□□□ 0.05
CTC1-203ENST00000578240 TNPO1Q92973 898 aaKnown RBP15.38■□□□□ 0.05
CTC1-203ENST00000578240 NAP1L2Q9ULW6 460 aaPredicted RBP15.38■□□□□ 0.05
CTC1-203ENST00000578240 TCP10L2B9ZVM9 353 aa15.37■□□□□ 0.05
CTC1-203ENST00000578240 ZBTB43O43298 467 aa15.37■□□□□ 0.05
CTC1-203ENST00000578240 PPFIA3O75145 1194 aa15.37■□□□□ 0.05
CTC1-203ENST00000578240 FDPSP14324 419 aaKnown RBP15.37■□□□□ 0.05
CTC1-203ENST00000578240 SYT1P21579 422 aa15.37■□□□□ 0.05
CTC1-203ENST00000578240 NOVP48745 357 aa15.37■□□□□ 0.05
CTC1-203ENST00000578240 NT5C2P49902 561 aa15.37■□□□□ 0.05
CTC1-203ENST00000578240 SHROOM1Q2M3G4 852 aaPredicted RBP15.37■□□□□ 0.05
CTC1-203ENST00000578240 SAMD7Q7Z3H4 446 aa15.37■□□□□ 0.05
CTC1-203ENST00000578240 CCDC144CPQ8IYA2 1237 aa15.37■□□□□ 0.05
CTC1-203ENST00000578240 LLPHQ9BRT6 129 aaKnown RBP15.37■□□□□ 0.05
CTC1-203ENST00000578240 DHX36Q9H2U1 1008 aaKnown RBP15.37■□□□□ 0.05
CTC1-203ENST00000578240 MKNK2Q9HBH9 465 aa15.37■□□□□ 0.05
CTC1-203ENST00000578240 TCP11L1Q9NUJ3 509 aa15.37■□□□□ 0.05
CTC1-203ENST00000578240 PARP14Q460N5 1801 aa15.36■□□□□ 0.05
CTC1-203ENST00000578240 IGKV6D-41A0A0C4DH26 115 aa15.36■□□□□ 0.05
CTC1-203ENST00000578240 AKR1B1P15121 316 aa15.36■□□□□ 0.05
CTC1-203ENST00000578240 METAP2P50579 478 aaKnown RBP eCLIP15.36■□□□□ 0.05
CTC1-203ENST00000578240 RCAN1P53805 252 aa15.36■□□□□ 0.05
CTC1-203ENST00000578240 TROAPQ12815 778 aa15.36■□□□□ 0.05
CTC1-203ENST00000578240 NFXL1Q6ZNB6 911 aa15.36■□□□□ 0.05
CTC1-203ENST00000578240 CLEC10AQ8IUN9 316 aa15.36■□□□□ 0.05
CTC1-203ENST00000578240 GPC2Q8N158 579 aa15.36■□□□□ 0.05
CTC1-203ENST00000578240 NEDD1Q8NHV4 660 aa15.36■□□□□ 0.05
CTC1-203ENST00000578240 ANKS1AQ92625 1134 aa15.36■□□□□ 0.05
CTC1-203ENST00000578240 NMRK2Q9NPI5 230 aa15.36■□□□□ 0.05
CTC1-203ENST00000578240 CNOT7Q9UIV1 285 aaKnown RBP15.36■□□□□ 0.05
CTC1-203ENST00000578240 SLC12A7Q9Y666 1083 aa15.36■□□□□ 0.05
CTC1-203ENST00000578240 WDR90Q96KV7 1748 aa15.36■□□□□ 0.05
CTC1-203ENST00000578240 PTPRFP10586 1907 aa15.36■□□□□ 0.05
CTC1-203ENST00000578240 ERICH2A1L162 156 aa15.35■□□□□ 0.05
CTC1-203ENST00000578240 CCDC69A6NI79 296 aa15.35■□□□□ 0.05
CTC1-203ENST00000578240 GOLGA8AA7E2F4 631 aa15.35■□□□□ 0.05
CTC1-203ENST00000578240 HLA-DOAP06340 250 aa15.35■□□□□ 0.05
CTC1-203ENST00000578240 TSPY3P0CV98 308 aa15.35■□□□□ 0.05
CTC1-203ENST00000578240 TSPY8P0CW00 308 aa15.35■□□□□ 0.05
CTC1-203ENST00000578240 ADD1P35611 737 aaKnown RBP15.35■□□□□ 0.05
CTC1-203ENST00000578240 IFIT1BQ5T764 474 aaKnown RBP15.35■□□□□ 0.05
CTC1-203ENST00000578240 FKBP1CQ5VVH2 108 aa15.35■□□□□ 0.05
CTC1-203ENST00000578240 RASGRP2Q7LDG7 609 aa15.35■□□□□ 0.05
CTC1-203ENST00000578240 DDX11Q96FC9 970 aa15.35■□□□□ 0.05
CTC1-203ENST00000578240 GPRC5DQ9NZD1 345 aa15.35■□□□□ 0.05
CTC1-203ENST00000578240 SWAP70Q9UH65 585 aa15.35■□□□□ 0.05
CTC1-203ENST00000578240 SCAF8Q9UPN6 1271 aaKnown RBP15.35■□□□□ 0.05
CTC1-203ENST00000578240 MMP14P50281 582 aa15.35■□□□□ 0.05
CTC1-203ENST00000578240 NUCB2P80303 420 aa15.35■□□□□ 0.05
CTC1-203ENST00000578240 RRP1BQ14684 758 aaKnown RBP15.35■□□□□ 0.05
CTC1-203ENST00000578240 TBC1D10BQ4KMP7 808 aaPredicted RBP15.35■□□□□ 0.05
CTC1-203ENST00000578240 TRPM4Q8TD43 1214 aa15.35■□□□□ 0.05
CTC1-203ENST00000578240 FAM151AQ8WW52 585 aa15.35■□□□□ 0.05
CTC1-203ENST00000578240 CHAMP1Q96JM3 812 aa15.35■□□□□ 0.05
CTC1-203ENST00000578240 VEZTQ9HBM0 779 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms