RNA–Protein interactions for RNA: ENST00000577779.1

PPP4R1-206, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-206ENST00000577779 BADQ92934 168 aa17.59■□□□□ 0.41
PPP4R1-206ENST00000577779 PORCNQ9H237 461 aa17.59■□□□□ 0.41
PPP4R1-206ENST00000577779 CWC22Q9HCG8 908 aaKnown RBP17.59■□□□□ 0.41
PPP4R1-206ENST00000577779 TMOD4Q9NZQ9 345 aa17.59■□□□□ 0.41
PPP4R1-206ENST00000577779 DNM1LO00429 736 aa17.58■□□□□ 0.4
PPP4R1-206ENST00000577779 CNGA1P29973 690 aa17.58■□□□□ 0.4
PPP4R1-206ENST00000577779 HOXA7P31268 230 aaPredicted RBP17.58■□□□□ 0.4
PPP4R1-206ENST00000577779 ERVK-9P63128 1117 aa17.58■□□□□ 0.4
PPP4R1-206ENST00000577779 ERVK-24P63145 666 aa17.58■□□□□ 0.4
PPP4R1-206ENST00000577779 LPAR1Q92633 364 aa17.58■□□□□ 0.4
PPP4R1-206ENST00000577779 RBPJLQ9UBG7 517 aa17.58■□□□□ 0.4
PPP4R1-206ENST00000577779 DDX20Q9UHI6 824 aaKnown RBP17.58■□□□□ 0.4
PPP4R1-206ENST00000577779 MSCO60682 206 aa17.57■□□□□ 0.4
PPP4R1-206ENST00000577779 PHKA1P46020 1223 aa17.57■□□□□ 0.4
PPP4R1-206ENST00000577779 BACE1P56817 501 aa17.57■□□□□ 0.4
PPP4R1-206ENST00000577779 RRP1BQ14684 758 aaKnown RBP17.57■□□□□ 0.4
PPP4R1-206ENST00000577779 Q3C1V9 767 aa17.57■□□□□ 0.4
PPP4R1-206ENST00000577779 FAM163AQ96GL9 167 aaPredicted RBP17.57■□□□□ 0.4
PPP4R1-206ENST00000577779 PAGR1Q9BTK6 254 aa17.57■□□□□ 0.4
PPP4R1-206ENST00000577779 ABCF2Q9UG63 623 aa17.57■□□□□ 0.4
PPP4R1-206ENST00000577779 MROH7-TTC4A0A0A0MT08 1334 aa17.56■□□□□ 0.4
PPP4R1-206ENST00000577779 MAP2K5Q13163 448 aa17.56■□□□□ 0.4
PPP4R1-206ENST00000577779 ATG9AQ7Z3C6 839 aa17.56■□□□□ 0.4
PPP4R1-206ENST00000577779 EDC3Q96F86 508 aaKnown RBP17.56■□□□□ 0.4
PPP4R1-206ENST00000577779 WDR18Q9BV38 432 aa17.56■□□□□ 0.4
PPP4R1-206ENST00000577779 RLFQ13129 1914 aa17.55■□□□□ 0.4
PPP4R1-206ENST00000577779 RHBDL3P58872 404 aa17.55■□□□□ 0.4
PPP4R1-206ENST00000577779 GTF3C2Q8WUA4 911 aaPredicted RBP17.55■□□□□ 0.4
PPP4R1-206ENST00000577779 FLRT1Q9NZU1 646 aa17.55■□□□□ 0.4
PPP4R1-206ENST00000577779 XIRP2A4UGR9 3374 aa17.54■□□□□ 0.4
PPP4R1-206ENST00000577779 GLRX3O76003 335 aaKnown RBP17.54■□□□□ 0.4
PPP4R1-206ENST00000577779 RFX5P48382 616 aaPredicted RBP17.54■□□□□ 0.4
PPP4R1-206ENST00000577779 GRIN2CQ14957 1233 aa17.54■□□□□ 0.4
PPP4R1-206ENST00000577779 GJC2Q5T442 439 aaPredicted RBP17.54■□□□□ 0.4
PPP4R1-206ENST00000577779 SPTY2D1Q68D10 685 aaPredicted RBP17.54■□□□□ 0.4
PPP4R1-206ENST00000577779 SLC39A5Q6ZMH5 540 aa17.54■□□□□ 0.4
PPP4R1-206ENST00000577779 RNPC3Q96LT9 517 aaKnown RBP17.54■□□□□ 0.4
PPP4R1-206ENST00000577779 CEP126Q9P2H0 1117 aa17.54■□□□□ 0.4
PPP4R1-206ENST00000577779 PIEZO1Q92508 2521 aa17.53■□□□□ 0.4
PPP4R1-206ENST00000577779 GPR75-ASB3A0A0A6YYF3 556 aa17.53■□□□□ 0.4
PPP4R1-206ENST00000577779 ATP2B2Q01814 1243 aa17.53■□□□□ 0.4
PPP4R1-206ENST00000577779 MAP3K12Q12852 859 aa17.53■□□□□ 0.4
PPP4R1-206ENST00000577779 TRIM60Q495X7 471 aa17.53■□□□□ 0.4
PPP4R1-206ENST00000577779 WDR63Q8IWG1 891 aa17.53■□□□□ 0.4
PPP4R1-206ENST00000577779 ARRDC4Q8NCT1 418 aa17.53■□□□□ 0.4
PPP4R1-206ENST00000577779 SIL1Q9H173 461 aa17.53■□□□□ 0.4
PPP4R1-206ENST00000577779 PDLIM7Q9NR12 457 aa17.53■□□□□ 0.4
PPP4R1-206ENST00000577779 HERC5Q9UII4 1024 aaKnown RBP17.53■□□□□ 0.4
PPP4R1-206ENST00000577779 NDUFB9Q9Y6M9 179 aa17.53■□□□□ 0.4
PPP4R1-206ENST00000577779 REV3LO60673 3130 aa17.52■□□□□ 0.4
PPP4R1-206ENST00000577779 C19orf81C9J6K1 198 aa17.52■□□□□ 0.4
PPP4R1-206ENST00000577779 KBTBD13C9JR72 458 aa17.52■□□□□ 0.4
PPP4R1-206ENST00000577779 ASNSP08243 561 aa17.52■□□□□ 0.4
PPP4R1-206ENST00000577779 MECOMQ03112 1051 aa17.52■□□□□ 0.4
PPP4R1-206ENST00000577779 RASGRF1Q13972 1273 aa17.52■□□□□ 0.4
PPP4R1-206ENST00000577779 WDR78Q5VTH9 848 aa17.52■□□□□ 0.4
PPP4R1-206ENST00000577779 CCDC102BQ68D86 513 aa17.52■□□□□ 0.4
PPP4R1-206ENST00000577779 SAMD1Q6SPF0 538 aaPredicted RBP17.52■□□□□ 0.4
PPP4R1-206ENST00000577779 SH3RF1Q7Z6J0 888 aa17.52■□□□□ 0.4
PPP4R1-206ENST00000577779 ATXN2LQ8WWM7 1075 aaKnown RBP17.52■□□□□ 0.4
PPP4R1-206ENST00000577779 TRIM43BA6NCK2 446 aa17.51■□□□□ 0.39
PPP4R1-206ENST00000577779 USP17L10C9JJH3 530 aa17.51■□□□□ 0.39
PPP4R1-206ENST00000577779 CYP2C19P33261 490 aa17.51■□□□□ 0.39
PPP4R1-206ENST00000577779 CCNA1P78396 465 aa17.51■□□□□ 0.39
PPP4R1-206ENST00000577779 POTEEQ6S8J3 1075 aa17.51■□□□□ 0.39
PPP4R1-206ENST00000577779 ADAMTS19Q8TE59 1207 aa17.51■□□□□ 0.39
PPP4R1-206ENST00000577779 PPM1EQ8WY54 764 aa17.51■□□□□ 0.39
PPP4R1-206ENST00000577779 TRIM43Q96BQ3 446 aaPredicted RBP17.51■□□□□ 0.39
PPP4R1-206ENST00000577779 SALL2Q9Y467 1007 aaPredicted RBP17.51■□□□□ 0.39
PPP4R1-206ENST00000577779 CHD7Q9P2D1 2997 aa17.51■□□□□ 0.39
PPP4R1-206ENST00000577779 PDS5AQ29RF7 1337 aaKnown RBP17.5■□□□□ 0.39
PPP4R1-206ENST00000577779 SLC15A5A6NIM6 579 aa17.5■□□□□ 0.39
PPP4R1-206ENST00000577779 MAP4K4O95819 1239 aaPredicted RBP17.5■□□□□ 0.39
PPP4R1-206ENST00000577779 DNAJB2P25686 324 aa17.5■□□□□ 0.39
PPP4R1-206ENST00000577779 ADORA1P30542 326 aa17.5■□□□□ 0.39
PPP4R1-206ENST00000577779 ERICH6Q7L0X2 663 aa17.5■□□□□ 0.39
PPP4R1-206ENST00000577779 TRPV1Q8NER1 839 aa17.5■□□□□ 0.39
PPP4R1-206ENST00000577779 ASB2Q96Q27 587 aa17.5■□□□□ 0.39
PPP4R1-206ENST00000577779 USP44Q9H0E7 712 aa17.5■□□□□ 0.39
PPP4R1-206ENST00000577779 RABGAP1Q9Y3P9 1069 aa17.5■□□□□ 0.39
PPP4R1-206ENST00000577779 MYO9BQ13459 2157 aa17.5■□□□□ 0.39
PPP4R1-206ENST00000577779 CIAO1O76071 339 aa17.49■□□□□ 0.39
PPP4R1-206ENST00000577779 PTPREP23469 700 aa17.49■□□□□ 0.39
PPP4R1-206ENST00000577779 SNX17Q15036 470 aa17.49■□□□□ 0.39
PPP4R1-206ENST00000577779 ZNF384Q8TF68 577 aa17.49■□□□□ 0.39
PPP4R1-206ENST00000577779 UHRF1Q96T88 793 aaPredicted RBP17.49■□□□□ 0.39
PPP4R1-206ENST00000577779 THEGQ9P2T0 379 aa17.49■□□□□ 0.39
PPP4R1-206ENST00000577779 PI4KBQ9UBF8 816 aa17.49■□□□□ 0.39
PPP4R1-206ENST00000577779 FBXO3Q9UK99 471 aa17.49■□□□□ 0.39
PPP4R1-206ENST00000577779 IVNS1ABPQ9Y6Y0 642 aa17.49■□□□□ 0.39
PPP4R1-206ENST00000577779 LDHCP07864 332 aa17.48■□□□□ 0.39
PPP4R1-206ENST00000577779 HOXC6P09630 235 aa17.48■□□□□ 0.39
PPP4R1-206ENST00000577779 CYBAP13498 195 aa17.48■□□□□ 0.39
PPP4R1-206ENST00000577779 EPHB4P54760 987 aa17.48■□□□□ 0.39
PPP4R1-206ENST00000577779 GSTO1P78417 241 aa17.48■□□□□ 0.39
PPP4R1-206ENST00000577779 JAG1P78504 1218 aa17.48■□□□□ 0.39
PPP4R1-206ENST00000577779 ANO1Q5XXA6 986 aa17.48■□□□□ 0.39
PPP4R1-206ENST00000577779 TEX11Q8IYF3 940 aa17.48■□□□□ 0.39
PPP4R1-206ENST00000577779 GAS2L1Q99501 681 aaPredicted RBP17.48■□□□□ 0.39
PPP4R1-206ENST00000577779 ZNF576Q9H609 170 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms