RNA–Protein interactions for RNA: ENST00000577497.5

CUEDC1-204, Transcript of CUE domain containing 1, humanhuman

TSL 2

Gene CUEDC1, Length 707 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-204ENST00000577497 ATP5JP18859 108 aa16.48■□□□□ 0.23
CUEDC1-204ENST00000577497 PLCD1P51178 756 aa16.48■□□□□ 0.23
CUEDC1-204ENST00000577497 SH3D19Q5HYK7 790 aa16.48■□□□□ 0.23
CUEDC1-204ENST00000577497 CERS3Q8IU89 383 aa16.48■□□□□ 0.23
CUEDC1-204ENST00000577497 LCORLQ8N3X6 602 aa16.48■□□□□ 0.23
CUEDC1-204ENST00000577497 ANKRD13CQ8N6S4 541 aa16.48■□□□□ 0.23
CUEDC1-204ENST00000577497 WDR18Q9BV38 432 aa16.48■□□□□ 0.23
CUEDC1-204ENST00000577497 TBC1D2Q9BYX2 928 aa16.48■□□□□ 0.23
CUEDC1-204ENST00000577497 AS3MTQ9HBK9 375 aa16.48■□□□□ 0.23
CUEDC1-204ENST00000577497 PAG1Q9NWQ8 432 aa16.48■□□□□ 0.23
CUEDC1-204ENST00000577497 GABRQQ9UN88 632 aa16.48■□□□□ 0.23
CUEDC1-204ENST00000577497 GH2P01242 217 aa16.47■□□□□ 0.23
CUEDC1-204ENST00000577497 PRMT2P55345 433 aa16.47■□□□□ 0.23
CUEDC1-204ENST00000577497 FCGRTP55899 365 aa16.47■□□□□ 0.23
CUEDC1-204ENST00000577497 BACE1P56817 501 aa16.47■□□□□ 0.23
CUEDC1-204ENST00000577497 TATDN1Q6P1N9 297 aa16.47■□□□□ 0.23
CUEDC1-204ENST00000577497 TMED8Q6PL24 325 aaPredicted RBP16.47■□□□□ 0.23
CUEDC1-204ENST00000577497 SDR42E1Q8WUS8 393 aa16.47■□□□□ 0.23
CUEDC1-204ENST00000577497 HAUS7Q99871 368 aa16.47■□□□□ 0.23
CUEDC1-204ENST00000577497 EHD4Q9H223 541 aa16.47■□□□□ 0.23
CUEDC1-204ENST00000577497 SERPINB13Q9UIV8 391 aa16.47■□□□□ 0.23
CUEDC1-204ENST00000577497 PEX10O60683 326 aa16.46■□□□□ 0.23
CUEDC1-204ENST00000577497 ADD2P35612 726 aa16.46■□□□□ 0.23
CUEDC1-204ENST00000577497 MTFR1Q15390 333 aa16.46■□□□□ 0.23
CUEDC1-204ENST00000577497 NBPF11Q86T75 865 aa16.46■□□□□ 0.23
CUEDC1-204ENST00000577497 ASCC2Q9H1I8 757 aaPredicted RBP16.46■□□□□ 0.23
CUEDC1-204ENST00000577497 ARMT1Q9H993 441 aa16.46■□□□□ 0.23
CUEDC1-204ENST00000577497 SHMT1P34896 483 aa16.45■□□□□ 0.22
CUEDC1-204ENST00000577497 TSHZ3Q63HK5 1081 aa16.45■□□□□ 0.22
CUEDC1-204ENST00000577497 RAET1EQ8TD07 263 aa16.45■□□□□ 0.22
CUEDC1-204ENST00000577497 DCTPP1Q9H773 170 aa16.45■□□□□ 0.22
CUEDC1-204ENST00000577497 PNMA3Q9UL41 463 aa16.45■□□□□ 0.22
CUEDC1-204ENST00000577497 PCDHB15Q9Y5E8 787 aa16.45■□□□□ 0.22
CUEDC1-204ENST00000577497 KIAA0100Q14667 2235 aaKnown RBP16.45■□□□□ 0.22
CUEDC1-204ENST00000577497 PDE4DIPQ5VU43 2346 aa16.44■□□□□ 0.22
CUEDC1-204ENST00000577497 USP17L10C9JJH3 530 aa16.44■□□□□ 0.22
CUEDC1-204ENST00000577497 SMIM22K7EJ46 135 aa16.44■□□□□ 0.22
CUEDC1-204ENST00000577497 PRKAB2O43741 272 aa16.44■□□□□ 0.22
CUEDC1-204ENST00000577497 MBD4O95243 580 aa16.44■□□□□ 0.22
CUEDC1-204ENST00000577497 CYP2D6P10635 497 aa16.44■□□□□ 0.22
CUEDC1-204ENST00000577497 HOXD10P28358 340 aa16.44■□□□□ 0.22
CUEDC1-204ENST00000577497 GRK4P32298 578 aa16.44■□□□□ 0.22
CUEDC1-204ENST00000577497 GABPAQ06546 454 aa16.44■□□□□ 0.22
CUEDC1-204ENST00000577497 FAM110CQ1W6H9 321 aa16.44■□□□□ 0.22
CUEDC1-204ENST00000577497 TTC6Q86TZ1 520 aa16.44■□□□□ 0.22
CUEDC1-204ENST00000577497 TMEM106CQ9BVX2 250 aa16.44■□□□□ 0.22
CUEDC1-204ENST00000577497 CRNKL1Q9BZJ0 848 aaKnown RBP16.44■□□□□ 0.22
CUEDC1-204ENST00000577497 DCP1AQ9NPI6 582 aaPredicted RBP16.44■□□□□ 0.22
CUEDC1-204ENST00000577497 EMILIN3Q9NT22 766 aa16.44■□□□□ 0.22
CUEDC1-204ENST00000577497 GINM1Q9NU53 330 aa16.44■□□□□ 0.22
CUEDC1-204ENST00000577497 MCM9Q9NXL9 1143 aa16.44■□□□□ 0.22
CUEDC1-204ENST00000577497 TNPO2O14787 897 aaKnown RBP16.43■□□□□ 0.22
CUEDC1-204ENST00000577497 POLR3DP05423 398 aaPredicted RBP16.43■□□□□ 0.22
CUEDC1-204ENST00000577497 GUCY1A2P33402 732 aa16.43■□□□□ 0.22
CUEDC1-204ENST00000577497 FLT3LGP49771 235 aa16.43■□□□□ 0.22
CUEDC1-204ENST00000577497 RRP1P56182 461 aaKnown RBP16.43■□□□□ 0.22
CUEDC1-204ENST00000577497 ZYXQ15942 572 aaKnown RBP16.43■□□□□ 0.22
CUEDC1-204ENST00000577497 YTHDC1Q96MU7 727 aaKnown RBP16.43■□□□□ 0.22
CUEDC1-204ENST00000577497 TMOD4Q9NZQ9 345 aa16.43■□□□□ 0.22
CUEDC1-204ENST00000577497 ELNP15502 786 aa16.42■□□□□ 0.22
CUEDC1-204ENST00000577497 PABPC4Q13310 644 aaKnown RBP eCLIP16.42■□□□□ 0.22
CUEDC1-204ENST00000577497 RAB3GAP1Q15042 981 aa16.42■□□□□ 0.22
CUEDC1-204ENST00000577497 ABCB5Q2M3G0 1257 aa16.42■□□□□ 0.22
CUEDC1-204ENST00000577497 CERKLQ49MI3 558 aaPredicted RBP16.42■□□□□ 0.22
CUEDC1-204ENST00000577497 POTEEQ6S8J3 1075 aa16.42■□□□□ 0.22
CUEDC1-204ENST00000577497 SLC44A5Q8NCS7 719 aa16.42■□□□□ 0.22
CUEDC1-204ENST00000577497 ACER1Q8TDN7 264 aa16.42■□□□□ 0.22
CUEDC1-204ENST00000577497 SHISA4Q96DD7 197 aa16.42■□□□□ 0.22
CUEDC1-204ENST00000577497 P2RX7Q99572 595 aaKnown RBP16.42■□□□□ 0.22
CUEDC1-204ENST00000577497 TXNRD2Q9NNW7 524 aa16.42■□□□□ 0.22
CUEDC1-204ENST00000577497 ECHDC1Q9NTX5 307 aa16.42■□□□□ 0.22
CUEDC1-204ENST00000577497 MYH7P12883 1935 aa16.42■□□□□ 0.22
CUEDC1-204ENST00000577497 C19orf81C9J6K1 198 aa16.41■□□□□ 0.22
CUEDC1-204ENST00000577497 HOXA7P31268 230 aaPredicted RBP16.41■□□□□ 0.22
CUEDC1-204ENST00000577497 GCLCP48506 637 aaPredicted RBP16.41■□□□□ 0.22
CUEDC1-204ENST00000577497 IRX3P78415 501 aaPredicted RBP16.41■□□□□ 0.22
CUEDC1-204ENST00000577497 DYNLL2Q96FJ2 89 aa16.41■□□□□ 0.22
CUEDC1-204ENST00000577497 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.41■□□□□ 0.22
CUEDC1-204ENST00000577497 PUS7LQ9H0K6 701 aaKnown RBP16.41■□□□□ 0.22
CUEDC1-204ENST00000577497 CYP2D7A0A087X1C5 515 aa16.4■□□□□ 0.22
CUEDC1-204ENST00000577497 HERVK_113P62684 666 aa16.4■□□□□ 0.22
CUEDC1-204ENST00000577497 UBE3CQ15386 1083 aa16.4■□□□□ 0.22
CUEDC1-204ENST00000577497 PRPF38BQ5VTL8 546 aaKnown RBP16.4■□□□□ 0.22
CUEDC1-204ENST00000577497 SLAIN1Q8ND83 568 aa16.4■□□□□ 0.22
CUEDC1-204ENST00000577497 FEZ1Q99689 392 aa16.4■□□□□ 0.22
CUEDC1-204ENST00000577497 BAZ2AQ9UIF9 1905 aaKnown RBP16.4■□□□□ 0.22
CUEDC1-204ENST00000577497 ADCY3O60266 1144 aa16.39■□□□□ 0.21
CUEDC1-204ENST00000577497 CCL5P13501 91 aa16.39■□□□□ 0.21
CUEDC1-204ENST00000577497 SEPT2Q15019 361 aa16.39■□□□□ 0.21
CUEDC1-204ENST00000577497 USP17L2Q6R6M4 530 aa16.39■□□□□ 0.21
CUEDC1-204ENST00000577497 OTUD7AQ8TE49 926 aaPredicted RBP16.39■□□□□ 0.21
CUEDC1-204ENST00000577497 C12orf42Q96LP6 360 aa16.39■□□□□ 0.21
CUEDC1-204ENST00000577497 CRBNQ96SW2 442 aa16.39■□□□□ 0.21
CUEDC1-204ENST00000577497 RBPJLQ9UBG7 517 aa16.39■□□□□ 0.21
CUEDC1-204ENST00000577497 MORF4L1Q9UBU8 362 aa16.39■□□□□ 0.21
CUEDC1-204ENST00000577497 BIN2Q9UBW5 565 aaPredicted RBP16.39■□□□□ 0.21
CUEDC1-204ENST00000577497 TAOK2Q9UL54 1235 aa16.39■□□□□ 0.21
CUEDC1-204ENST00000577497 PLXNB2O15031 1838 aa16.39■□□□□ 0.21
CUEDC1-204ENST00000577497 DOCK3Q8IZD9 2030 aa16.38■□□□□ 0.21
CUEDC1-204ENST00000577497 A0A1W2PRG0 241 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms