RNA–Protein interactions for RNA: ENST00000577315.5

MKS1-205, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-205ENST00000577315 EHD4Q9H223 541 aa18.14■□□□□ 0.49
MKS1-205ENST00000577315 DNAJC18Q9H819 358 aa18.14■□□□□ 0.49
MKS1-205ENST00000577315 CAPN2P17655 700 aa18.13■□□□□ 0.49
MKS1-205ENST00000577315 BACE1P56817 501 aa18.13■□□□□ 0.49
MKS1-205ENST00000577315 PRKCZQ05513 592 aa18.13■□□□□ 0.49
MKS1-205ENST00000577315 IRF5Q13568 498 aa18.13■□□□□ 0.49
MKS1-205ENST00000577315 ANKRD13CQ8N6S4 541 aa18.13■□□□□ 0.49
MKS1-205ENST00000577315 GCC1Q96CN9 775 aa18.13■□□□□ 0.49
MKS1-205ENST00000577315 SAP30BPQ9UHR5 308 aaKnown RBP18.13■□□□□ 0.49
MKS1-205ENST00000577315 SERPINB13Q9UIV8 391 aa18.13■□□□□ 0.49
MKS1-205ENST00000577315 NDUFB9Q9Y6M9 179 aa18.13■□□□□ 0.49
MKS1-205ENST00000577315 USP17L10C9JJH3 530 aa18.12■□□□□ 0.49
MKS1-205ENST00000577315 SLC34A2O95436 690 aa18.12■□□□□ 0.49
MKS1-205ENST00000577315 SIRT2Q8IXJ6 389 aa18.12■□□□□ 0.49
MKS1-205ENST00000577315 PXYLP1Q8TE99 480 aa18.12■□□□□ 0.49
MKS1-205ENST00000577315 ASCC2Q9H1I8 757 aaPredicted RBP18.12■□□□□ 0.49
MKS1-205ENST00000577315 BIN2Q9UBW5 565 aaPredicted RBP18.12■□□□□ 0.49
MKS1-205ENST00000577315 ZBTB21Q9ULJ3 1066 aa18.12■□□□□ 0.49
MKS1-205ENST00000577315 MAGEB6P1A0A0J9YX57 407 aa18.11■□□□□ 0.49
MKS1-205ENST00000577315 APBB1O00213 710 aa18.11■□□□□ 0.49
MKS1-205ENST00000577315 MYCP01106 439 aaPredicted RBP18.11■□□□□ 0.49
MKS1-205ENST00000577315 HOXA7P31268 230 aaPredicted RBP18.11■□□□□ 0.49
MKS1-205ENST00000577315 IRX3P78415 501 aaPredicted RBP18.11■□□□□ 0.49
MKS1-205ENST00000577315 MTMR2Q13614 643 aa18.11■□□□□ 0.49
MKS1-205ENST00000577315 SLC9C2Q5TAH2 1124 aa18.11■□□□□ 0.49
MKS1-205ENST00000577315 TATDN1Q6P1N9 297 aa18.11■□□□□ 0.49
MKS1-205ENST00000577315 RIOK1Q9BRS2 568 aaKnown RBP18.11■□□□□ 0.49
MKS1-205ENST00000577315 GABRQQ9UN88 632 aa18.11■□□□□ 0.49
MKS1-205ENST00000577315 DDX60LQ5H9U9 1706 aaKnown RBP18.11■□□□□ 0.49
MKS1-205ENST00000577315 ADCY3O60266 1144 aa18.1■□□□□ 0.49
MKS1-205ENST00000577315 GDF11O95390 407 aa18.1■□□□□ 0.49
MKS1-205ENST00000577315 FLT3LGP49771 235 aa18.1■□□□□ 0.49
MKS1-205ENST00000577315 MTFR1Q15390 333 aa18.1■□□□□ 0.49
MKS1-205ENST00000577315 GTF3C2Q8WUA4 911 aaPredicted RBP18.1■□□□□ 0.49
MKS1-205ENST00000577315 DNAJC2Q99543 621 aaKnown RBP18.1■□□□□ 0.49
MKS1-205ENST00000577315 CRNKL1Q9BZJ0 848 aaKnown RBP18.1■□□□□ 0.49
MKS1-205ENST00000577315 BRCA2P51587 3418 aa18.09■□□□□ 0.49
MKS1-205ENST00000577315 GOLIM4O00461 696 aa18.09■□□□□ 0.49
MKS1-205ENST00000577315 GJB1P08034 283 aa18.09■□□□□ 0.49
MKS1-205ENST00000577315 PDE6AP16499 860 aa18.09■□□□□ 0.49
MKS1-205ENST00000577315 USP17L2Q6R6M4 530 aa18.09■□□□□ 0.49
MKS1-205ENST00000577315 RNF208Q9H0X6 261 aa18.09■□□□□ 0.49
MKS1-205ENST00000577315 CABP5Q9NP86 173 aa18.09■□□□□ 0.49
MKS1-205ENST00000577315 TAOK2Q9UL54 1235 aa18.09■□□□□ 0.49
MKS1-205ENST00000577315 ZNF532Q9HCE3 1301 aa18.08■□□□□ 0.49
MKS1-205ENST00000577315 GH2P01242 217 aa18.08■□□□□ 0.48
MKS1-205ENST00000577315 POLR3DP05423 398 aaPredicted RBP18.08■□□□□ 0.48
MKS1-205ENST00000577315 CCL5P13501 91 aa18.08■□□□□ 0.48
MKS1-205ENST00000577315 ATP5JP18859 108 aa18.08■□□□□ 0.48
MKS1-205ENST00000577315 GJA8P48165 433 aa18.08■□□□□ 0.48
MKS1-205ENST00000577315 JAG1P78504 1218 aa18.08■□□□□ 0.48
MKS1-205ENST00000577315 LRRCC1Q9C099 1032 aa18.08■□□□□ 0.48
MKS1-205ENST00000577315 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.08■□□□□ 0.48
MKS1-205ENST00000577315 PAG1Q9NWQ8 432 aa18.08■□□□□ 0.48
MKS1-205ENST00000577315 MORF4L1Q9UBU8 362 aa18.08■□□□□ 0.48
MKS1-205ENST00000577315 MKI67P46013 3256 aaKnown RBP18.08■□□□□ 0.48
MKS1-205ENST00000577315 BAZ2AQ9UIF9 1905 aaKnown RBP18.08■□□□□ 0.48
MKS1-205ENST00000577315 USP14P54578 494 aa18.07■□□□□ 0.48
MKS1-205ENST00000577315 ABCB5Q2M3G0 1257 aa18.07■□□□□ 0.48
MKS1-205ENST00000577315 CERKLQ49MI3 558 aaPredicted RBP18.07■□□□□ 0.48
MKS1-205ENST00000577315 C12orf42Q96LP6 360 aa18.06■□□□□ 0.48
MKS1-205ENST00000577315 FEZ1Q99689 392 aa18.06■□□□□ 0.48
MKS1-205ENST00000577315 HAUS7Q99871 368 aa18.06■□□□□ 0.48
MKS1-205ENST00000577315 BOLA2Q9H3K6 86 aa18.06■□□□□ 0.48
MKS1-205ENST00000577315 PLXNB2O15031 1838 aa18.05■□□□□ 0.48
MKS1-205ENST00000577315 TCRBV5S4A2TA0A5A2 114 aa18.05■□□□□ 0.48
MKS1-205ENST00000577315 INHAP05111 366 aa18.05■□□□□ 0.48
MKS1-205ENST00000577315 HERVK_113P62684 666 aa18.05■□□□□ 0.48
MKS1-205ENST00000577315 ZSCAN25Q6NSZ9 544 aa18.05■□□□□ 0.48
MKS1-205ENST00000577315 GPRC5AQ8NFJ5 357 aa18.05■□□□□ 0.48
MKS1-205ENST00000577315 P2RX7Q99572 595 aaKnown RBP18.05■□□□□ 0.48
MKS1-205ENST00000577315 MCM9Q9NXL9 1143 aa18.05■□□□□ 0.48
MKS1-205ENST00000577315 ADD2P35612 726 aa18.04■□□□□ 0.48
MKS1-205ENST00000577315 PLCD1P51178 756 aa18.04■□□□□ 0.48
MKS1-205ENST00000577315 GABPAQ06546 454 aa18.04■□□□□ 0.48
MKS1-205ENST00000577315 RAB3GAP1Q15042 981 aa18.04■□□□□ 0.48
MKS1-205ENST00000577315 C20orf194Q5TEA3 1177 aa18.04■□□□□ 0.48
MKS1-205ENST00000577315 SHISA4Q96DD7 197 aa18.04■□□□□ 0.48
MKS1-205ENST00000577315 BCL11AQ9H165 835 aa18.04■□□□□ 0.48
MKS1-205ENST00000577315 UNC93B1Q9H1C4 597 aa18.04■□□□□ 0.48
MKS1-205ENST00000577315 DCP1AQ9NPI6 582 aaPredicted RBP18.04■□□□□ 0.48
MKS1-205ENST00000577315 EMILIN3Q9NT22 766 aa18.04■□□□□ 0.48
MKS1-205ENST00000577315 ATP8A2Q9NTI2 1148 aa18.04■□□□□ 0.48
MKS1-205ENST00000577315 USP17L15C9J2P7 530 aa18.03■□□□□ 0.48
MKS1-205ENST00000577315 USP17L13C9JLJ4 530 aa18.03■□□□□ 0.48
MKS1-205ENST00000577315 USP17L11C9JVI0 530 aa18.03■□□□□ 0.48
MKS1-205ENST00000577315 USP17L18D6R9N7 530 aa18.03■□□□□ 0.48
MKS1-205ENST00000577315 USP17L22D6RA61 530 aa18.03■□□□□ 0.48
MKS1-205ENST00000577315 USP17L17D6RBQ6 530 aa18.03■□□□□ 0.48
MKS1-205ENST00000577315 USP17L19D6RCP7 530 aa18.03■□□□□ 0.48
MKS1-205ENST00000577315 USP17L20D6RJB6 530 aa18.03■□□□□ 0.48
MKS1-205ENST00000577315 SGPL1O95470 568 aa18.03■□□□□ 0.48
MKS1-205ENST00000577315 ELNP15502 786 aa18.03■□□□□ 0.48
MKS1-205ENST00000577315 MAPK4P31152 587 aa18.03■□□□□ 0.48
MKS1-205ENST00000577315 SHMT1P34896 483 aa18.03■□□□□ 0.48
MKS1-205ENST00000577315 USP17L24Q0WX57 530 aa18.03■□□□□ 0.48
MKS1-205ENST00000577315 UBE3CQ15386 1083 aa18.03■□□□□ 0.48
MKS1-205ENST00000577315 SHROOM1Q2M3G4 852 aaPredicted RBP18.03■□□□□ 0.48
MKS1-205ENST00000577315 AMOTL1Q8IY63 956 aa18.03■□□□□ 0.48
MKS1-205ENST00000577315 LCORLQ8N3X6 602 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms