RNA–Protein interactions for RNA: ENST00000577001.1

PRPF8-216, Transcript of pre-mRNA processing factor 8, human

TSL 5

Gene PRPF8, Length 3,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-216	ENST00000577001	SYMPK	Q92797	1274 aa	Known RBP	16.92	■□□□□ 0.3
PRPF8-216	ENST00000577001	IGHMBP2	P38935	993 aa	Known RBP	16.91	■□□□□ 0.3
PRPF8-216	ENST00000577001	PPARA	Q07869	468 aa		16.91	■□□□□ 0.3
PRPF8-216	ENST00000577001	CCDC150	Q8NCX0	1101 aa		16.91	■□□□□ 0.3
PRPF8-216	ENST00000577001	TRIM10	Q9UDY6	481 aa		16.91	■□□□□ 0.3
PRPF8-216	ENST00000577001	CAMTA1	Q9Y6Y1	1673 aa		16.91	■□□□□ 0.3
PRPF8-216	ENST00000577001	MST1R	Q04912	1400 aa		16.91	■□□□□ 0.3
PRPF8-216	ENST00000577001	TCRBV5S4A2T	A0A5A2	114 aa		16.91	■□□□□ 0.3
PRPF8-216	ENST00000577001	CASQ1	P31415	396 aa		16.91	■□□□□ 0.3
PRPF8-216	ENST00000577001	TEX13A	Q9BXU3	409 aa	Predicted RBP	16.91	■□□□□ 0.3
PRPF8-216	ENST00000577001	USP54	Q70EL1	1684 aa		16.91	■□□□□ 0.3
PRPF8-216	ENST00000577001	RIC1	Q4ADV7	1423 aa		16.9	■□□□□ 0.3
PRPF8-216	ENST00000577001	MMP1	P03956	469 aa		16.9	■□□□□ 0.3
PRPF8-216	ENST00000577001	DNA2	P51530	1060 aa		16.9	■□□□□ 0.3
PRPF8-216	ENST00000577001	RBL2	Q08999	1139 aa		16.9	■□□□□ 0.3
PRPF8-216	ENST00000577001	SART3	Q15020	963 aa	Known RBP	16.9	■□□□□ 0.3
PRPF8-216	ENST00000577001	OSBPL5	Q9H0X9	879 aa	Predicted RBP	16.9	■□□□□ 0.3
PRPF8-216	ENST00000577001	RABEP2	Q9H5N1	569 aa		16.9	■□□□□ 0.3
PRPF8-216	ENST00000577001	TRIM49B	A6NDI0	452 aa		16.9	■□□□□ 0.3
PRPF8-216	ENST00000577001	ZMYND10	O75800	440 aa		16.9	■□□□□ 0.3
PRPF8-216	ENST00000577001	CAVIN2	O95810	425 aa		16.9	■□□□□ 0.3
PRPF8-216	ENST00000577001	DPYD	Q12882	1025 aa		16.9	■□□□□ 0.3
PRPF8-216	ENST00000577001	VGLL2	Q8N8G2	317 aa		16.9	■□□□□ 0.3
PRPF8-216	ENST00000577001	DYNLL2	Q96FJ2	89 aa		16.9	■□□□□ 0.3
PRPF8-216	ENST00000577001	NACAP1	Q9BZK3	213 aa		16.9	■□□□□ 0.3
PRPF8-216	ENST00000577001	ENC1	O14682	589 aa		16.9	■□□□□ 0.3
PRPF8-216	ENST00000577001	NEMF	O60524	1076 aa		16.9	■□□□□ 0.3
PRPF8-216	ENST00000577001	VSTM4	Q8IW00	320 aa		16.9	■□□□□ 0.3
PRPF8-216	ENST00000577001	REXO1L1P	Q8IX06	675 aa		16.9	■□□□□ 0.3
PRPF8-216	ENST00000577001	CARD10	Q9BWT7	1032 aa		16.9	■□□□□ 0.3
PRPF8-216	ENST00000577001	ANKRD65	E5RJM6	399 aa		16.89	■□□□□ 0.29
PRPF8-216	ENST00000577001	RNF225	M0QZC1	329 aa	Predicted RBP	16.89	■□□□□ 0.29
PRPF8-216	ENST00000577001	CASP14	P31944	242 aa		16.89	■□□□□ 0.29
PRPF8-216	ENST00000577001	ZNF569	Q5MCW4	686 aa		16.89	■□□□□ 0.29
PRPF8-216	ENST00000577001	IFIT1B	Q5T764	474 aa	Known RBP	16.89	■□□□□ 0.29
PRPF8-216	ENST00000577001	RRAGB	Q5VZM2	374 aa		16.89	■□□□□ 0.29
PRPF8-216	ENST00000577001	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	16.89	■□□□□ 0.29
PRPF8-216	ENST00000577001	SLC44A5	Q8NCS7	719 aa		16.89	■□□□□ 0.29
PRPF8-216	ENST00000577001	SAP30BP	Q9UHR5	308 aa	Known RBP	16.89	■□□□□ 0.29
PRPF8-216	ENST00000577001	GDA	Q9Y2T3	454 aa		16.89	■□□□□ 0.29
PRPF8-216	ENST00000577001	TTF1	Q15361	905 aa	Predicted RBP	16.89	■□□□□ 0.29
PRPF8-216	ENST00000577001	TRIM65	Q6PJ69	517 aa		16.89	■□□□□ 0.29
PRPF8-216	ENST00000577001	HPS3	Q969F9	1004 aa		16.89	■□□□□ 0.29
PRPF8-216	ENST00000577001	FBXO2	Q9UK22	296 aa	Predicted RBP	16.89	■□□□□ 0.29
PRPF8-216	ENST00000577001	MAGEB6P1	A0A0J9YX57	407 aa		16.88	■□□□□ 0.29
PRPF8-216	ENST00000577001	CUTA	O60888	179 aa		16.88	■□□□□ 0.29
PRPF8-216	ENST00000577001	CRKL	P46109	303 aa	Known RBP	16.88	■□□□□ 0.29
PRPF8-216	ENST00000577001	ERFE	Q4G0M1	354 aa		16.88	■□□□□ 0.29
PRPF8-216	ENST00000577001	IGSF22	Q8N9C0	903 aa		16.88	■□□□□ 0.29
PRPF8-216	ENST00000577001	TNS3	Q68CZ2	1445 aa		16.88	■□□□□ 0.29
PRPF8-216	ENST00000577001	LAMA4	Q16363	1823 aa		16.88	■□□□□ 0.29
PRPF8-216	ENST00000577001	SLFN14	P0C7P3	912 aa		16.88	■□□□□ 0.29
PRPF8-216	ENST00000577001	PRDX5	P30044	214 aa		16.88	■□□□□ 0.29
PRPF8-216	ENST00000577001	NLRP5	P59047	1200 aa		16.88	■□□□□ 0.29
PRPF8-216	ENST00000577001	ST5	P78524	1137 aa		16.88	■□□□□ 0.29
PRPF8-216	ENST00000577001	PTGDR	Q13258	359 aa		16.88	■□□□□ 0.29
PRPF8-216	ENST00000577001	UBE3C	Q15386	1083 aa		16.88	■□□□□ 0.29
PRPF8-216	ENST00000577001	CELF1	Q92879	486 aa	Known RBP	16.88	■□□□□ 0.29
PRPF8-216	ENST00000577001	SLF1	Q9BQI6	1058 aa		16.88	■□□□□ 0.29
PRPF8-216	ENST00000577001	CRYBG1	Q9Y4K1	1723 aa		16.88	■□□□□ 0.29
PRPF8-216	ENST00000577001	VGLL3	A8MV65	326 aa		16.88	■□□□□ 0.29
PRPF8-216	ENST00000577001	CPD	O75976	1380 aa		16.88	■□□□□ 0.29
PRPF8-216	ENST00000577001	TMCO3	Q6UWJ1	677 aa		16.88	■□□□□ 0.29
PRPF8-216	ENST00000577001	CAPZA3	Q96KX2	299 aa		16.88	■□□□□ 0.29
PRPF8-216	ENST00000577001	PSMB7	Q99436	277 aa		16.88	■□□□□ 0.29
PRPF8-216	ENST00000577001	SRP68	Q9UHB9	627 aa	Known RBP	16.88	■□□□□ 0.29
PRPF8-216	ENST00000577001	HPSE	Q9Y251	543 aa		16.88	■□□□□ 0.29
PRPF8-216	ENST00000577001	STRCP1	A6NGW2	1772 aa		16.87	■□□□□ 0.29
PRPF8-216	ENST00000577001	RAD9B	Q6WBX8	426 aa		16.87	■□□□□ 0.29
PRPF8-216	ENST00000577001	ENAH	Q8N8S7	591 aa	Predicted RBP	16.87	■□□□□ 0.29
PRPF8-216	ENST00000577001	DRC1	Q96MC2	740 aa		16.87	■□□□□ 0.29
PRPF8-216	ENST00000577001	MYO5A	Q9Y4I1	1855 aa	Known RBP	16.87	■□□□□ 0.29
PRPF8-216	ENST00000577001	FMNL1	O95466	1100 aa	Predicted RBP	16.87	■□□□□ 0.29
PRPF8-216	ENST00000577001	ENOX2	Q16206	610 aa	Known RBP	16.87	■□□□□ 0.29
PRPF8-216	ENST00000577001	TC2N	Q8N9U0	490 aa		16.87	■□□□□ 0.29
PRPF8-216	ENST00000577001	SLURP2	P0DP57	97 aa		16.87	■□□□□ 0.29
PRPF8-216	ENST00000577001	CUL4B	Q13620	913 aa		16.87	■□□□□ 0.29
PRPF8-216	ENST00000577001	KIF4B	Q2VIQ3	1234 aa		16.87	■□□□□ 0.29
PRPF8-216	ENST00000577001	TXNRD3	Q86VQ6	643 aa		16.87	■□□□□ 0.29
PRPF8-216	ENST00000577001	PPFIBP1	Q86W92	1011 aa		16.87	■□□□□ 0.29
PRPF8-216	ENST00000577001	TMEM87B	Q96K49	555 aa		16.87	■□□□□ 0.29
PRPF8-216	ENST00000577001	PCMTD1	Q96MG8	357 aa	Predicted RBP	16.87	■□□□□ 0.29
PRPF8-216	ENST00000577001	OVOS2	A0A0G2JMS6	1433 aa		16.86	■□□□□ 0.29
PRPF8-216	ENST00000577001	TRIM75P	A6NK02	468 aa		16.86	■□□□□ 0.29
PRPF8-216	ENST00000577001	USP17L8	P0C7I0	530 aa		16.86	■□□□□ 0.29
PRPF8-216	ENST00000577001	ITPK1	Q13572	414 aa		16.86	■□□□□ 0.29
PRPF8-216	ENST00000577001	NUP88	Q99567	741 aa	Predicted RBP	16.86	■□□□□ 0.29
PRPF8-216	ENST00000577001	NOL10	Q9BSC4	688 aa	Known RBP	16.86	■□□□□ 0.29
PRPF8-216	ENST00000577001	N4BP3	O15049	544 aa		16.86	■□□□□ 0.29
PRPF8-216	ENST00000577001	SASH3	O75995	380 aa		16.86	■□□□□ 0.29
PRPF8-216	ENST00000577001	PNMA6A	P0CW24	399 aa	Predicted RBP	16.86	■□□□□ 0.29
PRPF8-216	ENST00000577001	PIP4K2B	P78356	416 aa		16.86	■□□□□ 0.29
PRPF8-216	ENST00000577001	PPP2R3A	Q06190	1150 aa		16.86	■□□□□ 0.29
PRPF8-216	ENST00000577001	ATL3	Q6DD88	541 aa		16.86	■□□□□ 0.29
PRPF8-216	ENST00000577001	TUBE1	Q9UJT0	475 aa		16.86	■□□□□ 0.29
PRPF8-216	ENST00000577001	STX8	Q9UNK0	236 aa		16.86	■□□□□ 0.29
PRPF8-216	ENST00000577001	EIF6	P56537	245 aa	Known RBP	16.85	■□□□□ 0.29
PRPF8-216	ENST00000577001	GUCA1B	Q9UMX6	200 aa		16.85	■□□□□ 0.29
PRPF8-216	ENST00000577001	PARP3	Q9Y6F1	533 aa		16.85	■□□□□ 0.29
PRPF8-216	ENST00000577001	SRGAP2	O75044	1071 aa		16.85	■□□□□ 0.29

Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms