RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 GINM1Q9NU53 330 aa18.32■□□□□ 0.52
SMG6-220ENST00000576218 TMOD4Q9NZQ9 345 aa18.32■□□□□ 0.52
SMG6-220ENST00000576218 ZBTB21Q9ULJ3 1066 aa18.32■□□□□ 0.52
SMG6-220ENST00000576218 ATAD5Q96QE3 1844 aa18.32■□□□□ 0.52
SMG6-220ENST00000576218 SIPA1L1O43166 1804 aa18.31■□□□□ 0.52
SMG6-220ENST00000576218 CCDC85CA6NKD9 419 aa18.31■□□□□ 0.52
SMG6-220ENST00000576218 TRIM6-TRIM34B2RNG4 842 aa18.31■□□□□ 0.52
SMG6-220ENST00000576218 GH2P01242 217 aa18.31■□□□□ 0.52
SMG6-220ENST00000576218 PLCD1P51178 756 aa18.31■□□□□ 0.52
SMG6-220ENST00000576218 PDE1AP54750 535 aa18.31■□□□□ 0.52
SMG6-220ENST00000576218 RRP1BQ14684 758 aaKnown RBP18.31■□□□□ 0.52
SMG6-220ENST00000576218 RAB3GAP1Q15042 981 aa18.31■□□□□ 0.52
SMG6-220ENST00000576218 ABCB5Q2M3G0 1257 aa18.31■□□□□ 0.52
SMG6-220ENST00000576218 METTL16Q86W50 562 aaKnown RBP18.31■□□□□ 0.52
SMG6-220ENST00000576218 CD99L2Q8TCZ2 262 aa18.31■□□□□ 0.52
SMG6-220ENST00000576218 SMCR8Q8TEV9 937 aaPredicted RBP18.31■□□□□ 0.52
SMG6-220ENST00000576218 TRIM17Q9Y577 477 aa18.31■□□□□ 0.52
SMG6-220ENST00000576218 TLR2O60603 784 aa18.3■□□□□ 0.52
SMG6-220ENST00000576218 CYP2D6P10635 497 aa18.3■□□□□ 0.52
SMG6-220ENST00000576218 HMGCS2P54868 508 aa18.3■□□□□ 0.52
SMG6-220ENST00000576218 PABPC4Q13310 644 aaKnown RBP eCLIP18.3■□□□□ 0.52
SMG6-220ENST00000576218 PKN2Q16513 984 aaKnown RBP18.3■□□□□ 0.52
SMG6-220ENST00000576218 EVI5LQ96CN4 794 aa18.3■□□□□ 0.52
SMG6-220ENST00000576218 PNMA3Q9UL41 463 aa18.3■□□□□ 0.52
SMG6-220ENST00000576218 GPAA1O43292 621 aa18.29■□□□□ 0.52
SMG6-220ENST00000576218 ECM2O94769 699 aaPredicted RBP18.29■□□□□ 0.52
SMG6-220ENST00000576218 GNAT2P19087 354 aa18.29■□□□□ 0.52
SMG6-220ENST00000576218 TDO2P48775 406 aa18.29■□□□□ 0.52
SMG6-220ENST00000576218 NUCB1Q02818 461 aa18.29■□□□□ 0.52
SMG6-220ENST00000576218 MTMR2Q13614 643 aa18.29■□□□□ 0.52
SMG6-220ENST00000576218 OSBP2Q969R2 916 aa18.29■□□□□ 0.52
SMG6-220ENST00000576218 ARPP21Q9UBL0 812 aaPredicted RBP18.29■□□□□ 0.52
SMG6-220ENST00000576218 STAP2Q9UGK3 403 aa18.29■□□□□ 0.52
SMG6-220ENST00000576218 SWAP70Q9UH65 585 aa18.29■□□□□ 0.52
SMG6-220ENST00000576218 CPA4Q9UI42 421 aa18.29■□□□□ 0.52
SMG6-220ENST00000576218 AGTPBP1Q9UPW5 1226 aa18.29■□□□□ 0.52
SMG6-220ENST00000576218 SALL3Q9BXA9 1300 aa18.28■□□□□ 0.52
SMG6-220ENST00000576218 USP17L10C9JJH3 530 aa18.28■□□□□ 0.52
SMG6-220ENST00000576218 USP17L12C9JPN9 530 aa18.28■□□□□ 0.52
SMG6-220ENST00000576218 USP17L21D6R901 530 aa18.28■□□□□ 0.52
SMG6-220ENST00000576218 CYP2C8P10632 490 aa18.28■□□□□ 0.52
SMG6-220ENST00000576218 TATDN1Q6P1N9 297 aa18.28■□□□□ 0.52
SMG6-220ENST00000576218 PROCA1Q8NCQ7 364 aaPredicted RBP18.28■□□□□ 0.52
SMG6-220ENST00000576218 RILPL2Q969X0 211 aa18.28■□□□□ 0.52
SMG6-220ENST00000576218 STRBPQ96SI9 672 aaKnown RBP18.28■□□□□ 0.52
SMG6-220ENST00000576218 NACAP1Q9BZK3 213 aa18.28■□□□□ 0.52
SMG6-220ENST00000576218 EFCC1Q9HA90 598 aa18.28■□□□□ 0.52
SMG6-220ENST00000576218 DDX60LQ5H9U9 1706 aaKnown RBP18.28■□□□□ 0.52
SMG6-220ENST00000576218 M0R2C6 588 aa18.27■□□□□ 0.52
SMG6-220ENST00000576218 OSBPP22059 807 aa18.27■□□□□ 0.52
SMG6-220ENST00000576218 SHMT1P34896 483 aa18.27■□□□□ 0.52
SMG6-220ENST00000576218 BACE1P56817 501 aa18.27■□□□□ 0.52
SMG6-220ENST00000576218 MOGSQ13724 837 aa18.27■□□□□ 0.52
SMG6-220ENST00000576218 ZYXQ15942 572 aaKnown RBP18.27■□□□□ 0.52
SMG6-220ENST00000576218 SHROOM1Q2M3G4 852 aaPredicted RBP18.27■□□□□ 0.52
SMG6-220ENST00000576218 GPAT2Q6NUI2 795 aa18.27■□□□□ 0.52
SMG6-220ENST00000576218 DYNLL2Q96FJ2 89 aa18.27■□□□□ 0.52
SMG6-220ENST00000576218 WDR18Q9BV38 432 aa18.27■□□□□ 0.52
SMG6-220ENST00000576218 SLC45A1Q9Y2W3 748 aa18.27■□□□□ 0.52
SMG6-220ENST00000576218 CYP2D7A0A087X1C5 515 aa18.26■□□□□ 0.51
SMG6-220ENST00000576218 MINDY4BA8MYZ0 360 aa18.26■□□□□ 0.51
SMG6-220ENST00000576218 C19orf81C9J6K1 198 aa18.26■□□□□ 0.51
SMG6-220ENST00000576218 IRX3P78415 501 aaPredicted RBP18.26■□□□□ 0.51
SMG6-220ENST00000576218 TREML2Q5T2D2 321 aa18.26■□□□□ 0.51
SMG6-220ENST00000576218 FBXO46Q6PJ61 603 aaPredicted RBP18.26■□□□□ 0.51
SMG6-220ENST00000576218 PHIPQ8WWQ0 1821 aa18.26■□□□□ 0.51
SMG6-220ENST00000576218 JAG1P78504 1218 aa18.25■□□□□ 0.51
SMG6-220ENST00000576218 C12orf60Q5U649 245 aa18.25■□□□□ 0.51
SMG6-220ENST00000576218 CTR9Q6PD62 1173 aa18.25■□□□□ 0.51
SMG6-220ENST00000576218 OTOP1Q7RTM1 612 aa18.25■□□□□ 0.51
SMG6-220ENST00000576218 STK11IPQ8N1F8 1099 aa18.25■□□□□ 0.51
SMG6-220ENST00000576218 SLC44A5Q8NCS7 719 aa18.25■□□□□ 0.51
SMG6-220ENST00000576218 TAOK2Q9UL54 1235 aa18.25■□□□□ 0.51
SMG6-220ENST00000576218 BAZ2AQ9UIF9 1905 aaKnown RBP18.25■□□□□ 0.51
SMG6-220ENST00000576218 USP14P54578 494 aa18.24■□□□□ 0.51
SMG6-220ENST00000576218 LACTBP83111 547 aaPredicted RBP18.24■□□□□ 0.51
SMG6-220ENST00000576218 EVX2Q03828 476 aa18.24■□□□□ 0.51
SMG6-220ENST00000576218 GABPAQ06546 454 aa18.24■□□□□ 0.51
SMG6-220ENST00000576218 ZMYM1Q5SVZ6 1142 aa18.24■□□□□ 0.51
SMG6-220ENST00000576218 GIMAP6Q6P9H5 292 aa18.24■□□□□ 0.51
SMG6-220ENST00000576218 USP17L2Q6R6M4 530 aa18.24■□□□□ 0.51
SMG6-220ENST00000576218 SEC62Q99442 399 aaKnown RBP18.24■□□□□ 0.51
SMG6-220ENST00000576218 NAPBQ9H115 298 aa18.24■□□□□ 0.51
SMG6-220ENST00000576218 PTPRFP10586 1907 aa18.23■□□□□ 0.51
SMG6-220ENST00000576218 GSG1L2A8MUP6 293 aa18.23■□□□□ 0.51
SMG6-220ENST00000576218 FMNL1O95466 1100 aaPredicted RBP18.23■□□□□ 0.51
SMG6-220ENST00000576218 CDK8P49336 464 aa18.23■□□□□ 0.51
SMG6-220ENST00000576218 SEPT2Q15019 361 aa18.23■□□□□ 0.51
SMG6-220ENST00000576218 SH3D19Q5HYK7 790 aa18.23■□□□□ 0.51
SMG6-220ENST00000576218 C17orf99Q6UX52 265 aa18.23■□□□□ 0.51
SMG6-220ENST00000576218 TMEM179Q6ZVK1 233 aa18.23■□□□□ 0.51
SMG6-220ENST00000576218 PLEKHM2Q8IWE5 1019 aa18.23■□□□□ 0.51
SMG6-220ENST00000576218 MKNK2Q9HBH9 465 aa18.23■□□□□ 0.51
SMG6-220ENST00000576218 ZNF287Q9HBT7 754 aa18.23■□□□□ 0.51
SMG6-220ENST00000576218 HPS5Q9UPZ3 1129 aa18.23■□□□□ 0.51
SMG6-220ENST00000576218 PATL2C9JE40 543 aaKnown RBP18.22■□□□□ 0.51
SMG6-220ENST00000576218 SLC3A2P08195 630 aaKnown RBP18.22■□□□□ 0.51
SMG6-220ENST00000576218 ATP2B2Q01814 1243 aa18.22■□□□□ 0.51
SMG6-220ENST00000576218 C16orf86Q6ZW13 317 aa18.22■□□□□ 0.51
SMG6-220ENST00000576218 CCDC17Q96LX7 622 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms