RNA–Protein interactions for RNA: ENST00000576024.1

TP53-216, Transcript of tumor protein p53, humanhuman

TSL 1 (best)

Gene TP53, Length 175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-216ENST00000576024 UBE3DQ7Z6J8 389 aa4.47□□□□□ -1.69
TP53-216ENST00000576024 MCATQ8IVS2 390 aaKnown RBP4.47□□□□□ -1.69
TP53-216ENST00000576024 REXO1Q8N1G1 1221 aaKnown RBP4.47□□□□□ -1.69
TP53-216ENST00000576024 FBXO27Q8NI29 283 aa4.47□□□□□ -1.69
TP53-216ENST00000576024 NKD1Q969G9 470 aa4.47□□□□□ -1.69
TP53-216ENST00000576024 COX4I2Q96KJ9 171 aa4.47□□□□□ -1.69
TP53-216ENST00000576024 TGIF2Q9GZN2 237 aa4.47□□□□□ -1.69
TP53-216ENST00000576024 CCSER2Q9H7U1 834 aa4.47□□□□□ -1.69
TP53-216ENST00000576024 UBP1Q9NZI7 540 aa4.47□□□□□ -1.69
TP53-216ENST00000576024 REV1Q9UBZ9 1251 aa4.47□□□□□ -1.69
TP53-216ENST00000576024 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.47□□□□□ -1.69
TP53-216ENST00000576024 PRR19A6NJB7 356 aa4.46□□□□□ -1.7
TP53-216ENST00000576024 ATE1O95260 518 aa4.46□□□□□ -1.7
TP53-216ENST00000576024 IMPDH2P12268 514 aa4.46□□□□□ -1.7
TP53-216ENST00000576024 CYP7A1P22680 504 aa4.46□□□□□ -1.7
TP53-216ENST00000576024 MCM4P33991 863 aa4.46□□□□□ -1.7
TP53-216ENST00000576024 ETV3P41162 512 aa4.46□□□□□ -1.7
TP53-216ENST00000576024 CRKP46108 304 aa4.46□□□□□ -1.7
TP53-216ENST00000576024 RACK1P63244 317 aaKnown RBP4.46□□□□□ -1.7
TP53-216ENST00000576024 COL9A2Q14055 689 aaPredicted RBP4.46□□□□□ -1.7
TP53-216ENST00000576024 LRP8Q14114 963 aa4.46□□□□□ -1.7
TP53-216ENST00000576024 LETMD1Q6P1Q0 360 aa4.46□□□□□ -1.7
TP53-216ENST00000576024 SLITRK4Q8IW52 837 aa4.46□□□□□ -1.7
TP53-216ENST00000576024 SLFN12Q8IYM2 578 aa4.46□□□□□ -1.7
TP53-216ENST00000576024 FAM13CQ8NE31 585 aa4.46□□□□□ -1.7
TP53-216ENST00000576024 ACSF2Q96CM8 615 aaPredicted RBP4.46□□□□□ -1.7
TP53-216ENST00000576024 MIPEPQ99797 713 aa4.46□□□□□ -1.7
TP53-216ENST00000576024 MKNK2Q9HBH9 465 aa4.46□□□□□ -1.7
TP53-216ENST00000576024 LRRC4CQ9HCJ2 640 aa4.46□□□□□ -1.7
TP53-216ENST00000576024 BRMS1Q9HCU9 246 aa4.46□□□□□ -1.7
TP53-216ENST00000576024 PRDM5Q9NQX1 630 aaPredicted RBP4.46□□□□□ -1.7
TP53-216ENST00000576024 TJP2Q9UDY2 1190 aa4.46□□□□□ -1.7
TP53-216ENST00000576024 TPX2Q9ULW0 747 aaKnown RBP4.46□□□□□ -1.7
TP53-216ENST00000576024 MAPK8IP1Q9UQF2 711 aa4.46□□□□□ -1.7
TP53-216ENST00000576024 POLR3KQ9Y2Y1 108 aaPredicted RBP4.46□□□□□ -1.7
TP53-216ENST00000576024 CORINQ9Y5Q5 1042 aa4.46□□□□□ -1.7
TP53-216ENST00000576024 GNAT3A8MTJ3 354 aa4.45□□□□□ -1.7
TP53-216ENST00000576024 IGF2BP3O00425 579 aaKnown RBP eCLIP4.45□□□□□ -1.7
TP53-216ENST00000576024 ERCC5P28715 1186 aaPredicted RBP4.45□□□□□ -1.7
TP53-216ENST00000576024 CD97P48960 835 aa4.45□□□□□ -1.7
TP53-216ENST00000576024 PAK2Q13177 524 aa4.45□□□□□ -1.7
TP53-216ENST00000576024 GNL2Q13823 731 aaKnown RBP4.45□□□□□ -1.7
TP53-216ENST00000576024 LRRFIP1Q32MZ4 808 aaKnown RBP4.45□□□□□ -1.7
TP53-216ENST00000576024 C9orf131Q5VYM1 1079 aa4.45□□□□□ -1.7
TP53-216ENST00000576024 CYB5D2Q8WUJ1 264 aa4.45□□□□□ -1.7
TP53-216ENST00000576024 GPRASP2Q96D09 838 aa4.45□□□□□ -1.7
TP53-216ENST00000576024 EAF1Q96JC9 268 aaPredicted RBP4.45□□□□□ -1.7
TP53-216ENST00000576024 EHMT1Q9H9B1 1298 aa4.45□□□□□ -1.7
TP53-216ENST00000576024 PCMTD2Q9NV79 361 aa4.45□□□□□ -1.7
TP53-216ENST00000576024 GMIPQ9P107 970 aa4.45□□□□□ -1.7
TP53-216ENST00000576024 KLHL3Q9UH77 587 aa4.45□□□□□ -1.7
TP53-216ENST00000576024 PCDHB14Q9Y5E9 798 aa4.45□□□□□ -1.7
TP53-216ENST00000576024 KIAA1324LA8MWY0 1029 aaPredicted RBP4.44□□□□□ -1.7
TP53-216ENST00000576024 LEFTY1O75610 366 aa4.44□□□□□ -1.7
TP53-216ENST00000576024 SLITRK5O94991 958 aa4.44□□□□□ -1.7
TP53-216ENST00000576024 SSTR4P31391 388 aa4.44□□□□□ -1.7
TP53-216ENST00000576024 GJA8P48165 433 aa4.44□□□□□ -1.7
TP53-216ENST00000576024 CHMP4BP1P59074 171 aa4.44□□□□□ -1.7
TP53-216ENST00000576024 GK5Q6ZS86 529 aa4.44□□□□□ -1.7
TP53-216ENST00000576024 SHISA5Q8N114 240 aa4.44□□□□□ -1.7
TP53-216ENST00000576024 NETO1Q8TDF5 533 aa4.44□□□□□ -1.7
TP53-216ENST00000576024 RASGRP4Q8TDF6 673 aa4.44□□□□□ -1.7
TP53-216ENST00000576024 XAGE3Q8WTP9 111 aa4.44□□□□□ -1.7
TP53-216ENST00000576024 DPH2Q9BQC3 489 aaPredicted RBP4.44□□□□□ -1.7
TP53-216ENST00000576024 BSDC1Q9NW68 430 aaPredicted RBP4.44□□□□□ -1.7
TP53-216ENST00000576024 INPP5FQ9Y2H2 1132 aa4.44□□□□□ -1.7
TP53-216ENST00000576024 EOMESO95936 686 aa4.43□□□□□ -1.7
TP53-216ENST00000576024 CEACAM5P06731 702 aa4.43□□□□□ -1.7
TP53-216ENST00000576024 RAG1P15918 1043 aa4.43□□□□□ -1.7
TP53-216ENST00000576024 TNNI2P48788 182 aa4.43□□□□□ -1.7
TP53-216ENST00000576024 IFI16Q16666 785 aaKnown RBP4.43□□□□□ -1.7
TP53-216ENST00000576024 MSMPQ1L6U9 139 aa4.43□□□□□ -1.7
TP53-216ENST00000576024 SFRP5Q5T4F7 317 aa4.43□□□□□ -1.7
TP53-216ENST00000576024 ARTNQ5T4W7 220 aa4.43□□□□□ -1.7
TP53-216ENST00000576024 C22orf34Q6ZV56 151 aa4.43□□□□□ -1.7
TP53-216ENST00000576024 PHACTR4Q8IZ21 702 aa4.43□□□□□ -1.7
TP53-216ENST00000576024 STK11IPQ8N1F8 1099 aa4.43□□□□□ -1.7
TP53-216ENST00000576024 MISP3Q96FF7 219 aa4.43□□□□□ -1.7
TP53-216ENST00000576024 CCDC74BQ96LY2 380 aa4.43□□□□□ -1.7
TP53-216ENST00000576024 FERD3LQ96RJ6 166 aa4.43□□□□□ -1.7
TP53-216ENST00000576024 ZFP64Q9NPA5 681 aa4.43□□□□□ -1.7
TP53-216ENST00000576024 ZNRF3Q9ULT6 936 aa4.43□□□□□ -1.7
TP53-216ENST00000576024 ANGEL1Q9UNK9 670 aaKnown RBP4.43□□□□□ -1.7
TP53-216ENST00000576024 TMEM265A0A087WTH1 108 aa4.42□□□□□ -1.7
TP53-216ENST00000576024 MEIS3P2A8K0S8 358 aa4.42□□□□□ -1.7
TP53-216ENST00000576024 SPINK2P20155 84 aa4.42□□□□□ -1.7
TP53-216ENST00000576024 CCNFP41002 786 aa4.42□□□□□ -1.7
TP53-216ENST00000576024 KIR3DL1P43629 444 aa4.42□□□□□ -1.7
TP53-216ENST00000576024 CLCQ05315 142 aa4.42□□□□□ -1.7
TP53-216ENST00000576024 RAD51AP2Q09MP3 1159 aa4.42□□□□□ -1.7
TP53-216ENST00000576024 OVOS1Q6IE37 1185 aa4.42□□□□□ -1.7
TP53-216ENST00000576024 VSIG10LQ86VR7 867 aa4.42□□□□□ -1.7
TP53-216ENST00000576024 VPS37DQ86XT2 251 aa4.42□□□□□ -1.7
TP53-216ENST00000576024 DTX1Q86Y01 620 aa4.42□□□□□ -1.7
TP53-216ENST00000576024 MFSD4AQ8N468 514 aa4.42□□□□□ -1.7
TP53-216ENST00000576024 FAM181AQ8N9Y4 354 aa4.42□□□□□ -1.7
TP53-216ENST00000576024 TMEM40Q8WWA1 233 aa4.42□□□□□ -1.7
TP53-216ENST00000576024 SEC16BQ96JE7 1060 aa4.42□□□□□ -1.7
TP53-216ENST00000576024 ACBD3Q9H3P7 528 aa4.42□□□□□ -1.7
TP53-216ENST00000576024 CAPN10Q9HC96 672 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms