RNA–Protein interactions for RNA: ENST00000575909.1

TOM1L1-222, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 3

Gene TOM1L1, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-222ENST00000575909 CHURC1-FNTBB4DL54 471 aa9.16□□□□□ -0.94
TOM1L1-222ENST00000575909 ADH5P11766 374 aa9.16□□□□□ -0.94
TOM1L1-222ENST00000575909 ELNP15502 786 aa9.16□□□□□ -0.94
TOM1L1-222ENST00000575909 RAG1P15918 1043 aa9.16□□□□□ -0.94
TOM1L1-222ENST00000575909 CHMP4BP1P59074 171 aa9.16□□□□□ -0.94
TOM1L1-222ENST00000575909 NCAPHQ15003 741 aa9.16□□□□□ -0.94
TOM1L1-222ENST00000575909 SLC6A19Q695T7 634 aa9.16□□□□□ -0.94
TOM1L1-222ENST00000575909 ZNF662Q6ZS27 426 aa9.16□□□□□ -0.94
TOM1L1-222ENST00000575909 MRPL41Q8IXM3 137 aaKnown RBP9.16□□□□□ -0.94
TOM1L1-222ENST00000575909 FAM13CQ8NE31 585 aa9.16□□□□□ -0.94
TOM1L1-222ENST00000575909 ST13P5Q8NFI4 369 aaPredicted RBP9.16□□□□□ -0.94
TOM1L1-222ENST00000575909 ZNF669Q96BR6 464 aaPredicted RBP9.16□□□□□ -0.94
TOM1L1-222ENST00000575909 TMEM87BQ96K49 555 aa9.16□□□□□ -0.94
TOM1L1-222ENST00000575909 LTBP3Q9NS15 1303 aa9.15□□□□□ -0.94
TOM1L1-222ENST00000575909 NTF4P34130 210 aa9.15□□□□□ -0.94
TOM1L1-222ENST00000575909 SOX4Q06945 474 aaPredicted RBP9.15□□□□□ -0.94
TOM1L1-222ENST00000575909 ZYXQ15942 572 aaKnown RBP9.15□□□□□ -0.94
TOM1L1-222ENST00000575909 MTERF2Q49AM1 385 aa9.15□□□□□ -0.94
TOM1L1-222ENST00000575909 VHLLQ6RSH7 139 aa9.15□□□□□ -0.94
TOM1L1-222ENST00000575909 CDC37L1Q7L3B6 337 aa9.15□□□□□ -0.94
TOM1L1-222ENST00000575909 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.15□□□□□ -0.94
TOM1L1-222ENST00000575909 AP4E1Q9UPM8 1137 aa9.15□□□□□ -0.94
TOM1L1-222ENST00000575909 UPK3BL1B0FP48 263 aa9.14□□□□□ -0.95
TOM1L1-222ENST00000575909 UPK3BL2E5RIL1 263 aa9.14□□□□□ -0.95
TOM1L1-222ENST00000575909 CAP2P40123 477 aa9.14□□□□□ -0.95
TOM1L1-222ENST00000575909 SNRPNP63162 240 aaKnown RBP9.14□□□□□ -0.95
TOM1L1-222ENST00000575909 EEPD1Q7L9B9 569 aa9.14□□□□□ -0.95
TOM1L1-222ENST00000575909 LILRB2Q8N423 598 aa9.14□□□□□ -0.95
TOM1L1-222ENST00000575909 SH3TC2Q8TF17 1288 aa9.14□□□□□ -0.95
TOM1L1-222ENST00000575909 GSX1Q9H4S2 264 aaPredicted RBP9.14□□□□□ -0.95
TOM1L1-222ENST00000575909 MKL2Q9ULH7 1088 aa9.14□□□□□ -0.95
TOM1L1-222ENST00000575909 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.14□□□□□ -0.95
TOM1L1-222ENST00000575909 B2RBV5 119 aa9.13□□□□□ -0.95
TOM1L1-222ENST00000575909 ARHGEF15O94989 841 aa9.13□□□□□ -0.95
TOM1L1-222ENST00000575909 TIAF1O95411 115 aa9.13□□□□□ -0.95
TOM1L1-222ENST00000575909 TTLL4Q14679 1199 aa9.13□□□□□ -0.95
TOM1L1-222ENST00000575909 PRRT3Q5FWE3 981 aa9.13□□□□□ -0.95
TOM1L1-222ENST00000575909 ANKRD34AQ69YU3 496 aa9.13□□□□□ -0.95
TOM1L1-222ENST00000575909 TMEM130Q8N3G9 435 aa9.13□□□□□ -0.95
TOM1L1-222ENST00000575909 C12orf50Q8NA57 414 aaPredicted RBP9.13□□□□□ -0.95
TOM1L1-222ENST00000575909 DHRS1Q96LJ7 313 aa9.13□□□□□ -0.95
TOM1L1-222ENST00000575909 NEFMP07197 916 aa9.12□□□□□ -0.95
TOM1L1-222ENST00000575909 BBS9Q3SYG4 887 aa9.12□□□□□ -0.95
TOM1L1-222ENST00000575909 FDX2Q6P4F2 183 aa9.12□□□□□ -0.95
TOM1L1-222ENST00000575909 DYMQ7RTS9 669 aa9.12□□□□□ -0.95
TOM1L1-222ENST00000575909 PHACTR4Q8IZ21 702 aa9.12□□□□□ -0.95
TOM1L1-222ENST00000575909 FBRSQ9HAH7 460 aa9.12□□□□□ -0.95
TOM1L1-222ENST00000575909 PIDD1Q9HB75 910 aa9.12□□□□□ -0.95
TOM1L1-222ENST00000575909 NOP53Q9NZM5 478 aaKnown RBP9.12□□□□□ -0.95
TOM1L1-222ENST00000575909 ZNF214Q9UL59 606 aaPredicted RBP9.12□□□□□ -0.95
TOM1L1-222ENST00000575909 RGS13O14921 159 aa9.11□□□□□ -0.95
TOM1L1-222ENST00000575909 HCLS1P14317 486 aaPredicted RBP9.11□□□□□ -0.95
TOM1L1-222ENST00000575909 DRD2P14416 443 aa9.11□□□□□ -0.95
TOM1L1-222ENST00000575909 SLC7A5Q01650 507 aa9.11□□□□□ -0.95
TOM1L1-222ENST00000575909 PLEKHG4Q58EX7 1191 aa9.11□□□□□ -0.95
TOM1L1-222ENST00000575909 MRM1Q6IN84 353 aaKnown RBP9.11□□□□□ -0.95
TOM1L1-222ENST00000575909 THAP3Q8WTV1 239 aaPredicted RBP9.11□□□□□ -0.95
TOM1L1-222ENST00000575909 CCDC74BQ96LY2 380 aa9.11□□□□□ -0.95
TOM1L1-222ENST00000575909 EPN3Q9H201 632 aa9.11□□□□□ -0.95
TOM1L1-222ENST00000575909 ASPAP45381 313 aa9.1□□□□□ -0.95
TOM1L1-222ENST00000575909 SLBPQ14493 270 aaKnown RBP eCLIP9.1□□□□□ -0.95
TOM1L1-222ENST00000575909 NKG7Q16617 165 aa9.1□□□□□ -0.95
TOM1L1-222ENST00000575909 GNPTABQ3T906 1256 aa9.1□□□□□ -0.95
TOM1L1-222ENST00000575909 C2orf27AQ580R0 203 aa9.1□□□□□ -0.95
TOM1L1-222ENST00000575909 KIAA1211LQ6NV74 962 aa9.1□□□□□ -0.95
TOM1L1-222ENST00000575909 TREML4Q6UXN2 200 aa9.1□□□□□ -0.95
TOM1L1-222ENST00000575909 HOMER1Q86YM7 354 aa9.1□□□□□ -0.95
TOM1L1-222ENST00000575909 JMYQ8N9B5 988 aa9.1□□□□□ -0.95
TOM1L1-222ENST00000575909 KLHL6Q8WZ60 621 aa9.1□□□□□ -0.95
TOM1L1-222ENST00000575909 APPBP2Q92624 585 aa9.1□□□□□ -0.95
TOM1L1-222ENST00000575909 ISL2Q96A47 359 aa9.1□□□□□ -0.95
TOM1L1-222ENST00000575909 PCDHB10Q9UN67 800 aa9.1□□□□□ -0.95
TOM1L1-222ENST00000575909 KDM2BQ8NHM5 1336 aa9.09□□□□□ -0.95
TOM1L1-222ENST00000575909 FAM86C2PA6NEL3 165 aa9.09□□□□□ -0.95
TOM1L1-222ENST00000575909 F8W735 103 aaPredicted RBP9.09□□□□□ -0.95
TOM1L1-222ENST00000575909 FAM229AH3BQW9 127 aa9.09□□□□□ -0.95
TOM1L1-222ENST00000575909 RNGTTO60942 597 aaKnown RBP9.09□□□□□ -0.95
TOM1L1-222ENST00000575909 CDC45O75419 566 aa9.09□□□□□ -0.95
TOM1L1-222ENST00000575909 CST3P01034 146 aaPredicted RBP9.09□□□□□ -0.95
TOM1L1-222ENST00000575909 POLR2BP30876 1174 aaKnown RBP9.09□□□□□ -0.95
TOM1L1-222ENST00000575909 SSRP1Q08945 709 aaKnown RBP9.09□□□□□ -0.95
TOM1L1-222ENST00000575909 C2CD4AQ8NCU7 369 aaPredicted RBP9.09□□□□□ -0.95
TOM1L1-222ENST00000575909 CYB5D2Q8WUJ1 264 aa9.09□□□□□ -0.95
TOM1L1-222ENST00000575909 KIF2CQ99661 725 aa9.09□□□□□ -0.95
TOM1L1-222ENST00000575909 SSU72Q9NP77 194 aaKnown RBP9.09□□□□□ -0.95
TOM1L1-222ENST00000575909 FANCLQ9NW38 375 aa9.09□□□□□ -0.95
TOM1L1-222ENST00000575909 TMEM260Q9NX78 707 aa9.09□□□□□ -0.95
TOM1L1-222ENST00000575909 ZMYM5Q9UJ78 669 aa9.09□□□□□ -0.95
TOM1L1-222ENST00000575909 ACTL7BQ9Y614 415 aa9.09□□□□□ -0.95
TOM1L1-222ENST00000575909 PPM1GO15355 546 aaPredicted RBP9.08□□□□□ -0.96
TOM1L1-222ENST00000575909 GBP1P32455 592 aa9.08□□□□□ -0.96
TOM1L1-222ENST00000575909 PMS1P54277 932 aaKnown RBP9.08□□□□□ -0.96
TOM1L1-222ENST00000575909 SPATC1Q76KD6 591 aa9.08□□□□□ -0.96
TOM1L1-222ENST00000575909 SMYD4Q8IYR2 804 aaPredicted RBP9.08□□□□□ -0.96
TOM1L1-222ENST00000575909 ZNF775Q96BV0 537 aaPredicted RBP9.08□□□□□ -0.96
TOM1L1-222ENST00000575909 FOXQ1Q9C009 403 aa9.08□□□□□ -0.96
TOM1L1-222ENST00000575909 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.08□□□□□ -0.96
TOM1L1-222ENST00000575909 KANSL2Q9H9L4 492 aa9.08□□□□□ -0.96
TOM1L1-222ENST00000575909 FAM105AQ9NUU6 356 aa9.08□□□□□ -0.96
TOM1L1-222ENST00000575909 SUCOQ9UBS9 1254 aaKnown RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms